EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000018714 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 3201 bases
Position: chrKE721594.1:3322483-3325683
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000021640	RNA_pol_L_2	PF13656.6	2e-29	1	1
ENSPTIP00000021636	RNA_pol_L_2	PF13656.6	2.6e-29	1	1
ENSPTIP00000021640	RNA_pol_L	PF01193.24	2.2e-10	1	1
ENSPTIP00000021636	RNA_pol_L	PF01193.24	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000026025	-	339	-	ENSPTIP00000021636	112 (aa)	-	-
ENSPTIT00000026031	-	312	-	ENSPTIP00000021640	103 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000018714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000018714's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000018714	-	77	35.443	ENSPTIG00000018137	POLR1D	59	35.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000018714	-	89	96.739	ENSG00000228049	POLR2J2	91	87.619	Homo_sapiens
ENSPTIG00000018714	-	100	97.087	ENSG00000005075	POLR2J	97	91.228	Homo_sapiens
ENSPTIG00000018714	-	100	91.262	ENSAPOG00000019538	polr2j	97	85.965	Acanthochromis_polyacanthus
ENSPTIG00000018714	-	100	88.496	ENSAMEG00000015480	-	98	83.871	Ailuropoda_melanoleuca
ENSPTIG00000018714	-	92	64.583	ENSACIG00000014549	POLR2J2	88	61.682	Amphilophus_citrinellus
ENSPTIG00000018714	-	100	90.291	ENSAOCG00000006937	polr2j	97	85.088	Amphiprion_ocellaris
ENSPTIG00000018714	-	100	91.262	ENSAPEG00000021761	polr2j	97	85.965	Amphiprion_percula
ENSPTIG00000018714	-	100	91.262	ENSATEG00000013312	-	97	85.965	Anabas_testudineus
ENSPTIG00000018714	-	100	91.262	ENSATEG00000009731	polr2j	97	85.965	Anabas_testudineus
ENSPTIG00000018714	-	96	100.000	ENSAPLG00000003744	-	98	100.000	Anas_platyrhynchos
ENSPTIG00000018714	-	100	87.379	ENSACAG00000000251	POLR2J	97	81.579	Anolis_carolinensis
ENSPTIG00000018714	-	100	91.262	ENSACLG00000014564	polr2j	97	85.965	Astatotilapia_calliptera
ENSPTIG00000018714	-	100	93.204	ENSAMXG00000007517	polr2j	97	87.719	Astyanax_mexicanus
ENSPTIG00000018714	-	69	66.197	ENSBTAG00000048046	-	60	66.197	Bos_taurus
ENSPTIG00000018714	-	87	71.111	WBGene00012187	rpb-11	87	64.151	Caenorhabditis_elegans
ENSPTIG00000018714	-	100	97.087	ENSCJAG00000016203	-	97	91.228	Callithrix_jacchus
ENSPTIG00000018714	-	100	97.087	ENSCAFG00000013683	-	97	91.228	Canis_familiaris
ENSPTIG00000018714	-	100	98.058	ENSTSYG00000029243	-	88	98.058	Carlito_syrichta
ENSPTIG00000018714	-	100	97.087	ENSCPOG00000001401	-	97	91.228	Cavia_porcellus
ENSPTIG00000018714	-	87	84.615	ENSCATG00000016595	-	97	85.870	Cercocebus_atys
ENSPTIG00000018714	-	100	97.087	ENSCLAG00000005238	-	97	91.228	Chinchilla_lanigera
ENSPTIG00000018714	-	100	97.087	ENSCSAG00000018092	-	97	91.228	Chlorocebus_sabaeus
ENSPTIG00000018714	-	100	77.670	ENSCING00000020531	-	97	72.807	Ciona_intestinalis
ENSPTIG00000018714	-	100	77.670	ENSCSAVG00000006948	-	97	72.807	Ciona_savignyi
ENSPTIG00000018714	-	100	97.087	ENSCGRG00001012814	Polr2j	97	91.228	Cricetulus_griseus_chok1gshd
ENSPTIG00000018714	-	100	79.612	ENSCGRG00000008433	Polr2j	97	75.439	Cricetulus_griseus_crigri
ENSPTIG00000018714	-	100	90.291	ENSCSEG00000020352	polr2j	97	85.088	Cynoglossus_semilaevis
ENSPTIG00000018714	-	100	90.291	ENSCVAG00000014267	polr2j	97	85.088	Cyprinodon_variegatus
ENSPTIG00000018714	-	100	92.233	ENSDARG00000035146	polr2j	97	86.842	Danio_rerio
ENSPTIG00000018714	-	100	97.087	ENSDORG00000005934	Polr2j	97	91.228	Dipodomys_ordii
ENSPTIG00000018714	-	89	79.348	FBgn0032634	Rpb11	96	70.536	Drosophila_melanogaster
ENSPTIG00000018714	-	69	83.099	ENSEBUG00000016100	polr2j	82	83.099	Eptatretus_burgeri
ENSPTIG00000018714	-	100	97.087	ENSEASG00005016864	-	97	91.228	Equus_asinus_asinus
ENSPTIG00000018714	-	100	92.233	ENSELUG00000012822	polr2j	97	86.842	Esox_lucius
ENSPTIG00000018714	-	100	97.087	ENSFCAG00000000377	-	97	91.228	Felis_catus
ENSPTIG00000018714	-	100	97.087	ENSFALG00000009523	POLR2J	97	91.228	Ficedula_albicollis
ENSPTIG00000018714	-	100	97.087	ENSFDAG00000010507	-	97	91.228	Fukomys_damarensis
ENSPTIG00000018714	-	100	91.262	ENSFHEG00000006625	polr2j	97	85.965	Fundulus_heteroclitus
ENSPTIG00000018714	-	100	91.262	ENSGMOG00000018207	polr2j	97	85.965	Gadus_morhua
ENSPTIG00000018714	-	100	97.087	ENSGALG00000030808	-	97	91.228	Gallus_gallus
ENSPTIG00000018714	-	100	91.262	ENSGAFG00000019555	polr2j	97	85.965	Gambusia_affinis
ENSPTIG00000018714	-	100	91.262	ENSGACG00000003310	polr2j	97	85.965	Gasterosteus_aculeatus
ENSPTIG00000018714	-	96	100.000	ENSGAGG00000018304	-	90	100.000	Gopherus_agassizii
ENSPTIG00000018714	-	96	95.960	ENSGGOG00000004519	-	79	95.960	Gorilla_gorilla
ENSPTIG00000018714	-	100	91.262	ENSHBUG00000008467	polr2j	97	85.965	Haplochromis_burtoni
ENSPTIG00000018714	-	100	97.087	ENSHGLG00000013598	POLR2J	97	91.228	Heterocephalus_glaber_female
ENSPTIG00000018714	-	100	97.087	ENSHGLG00100011242	POLR2J	97	91.228	Heterocephalus_glaber_male
ENSPTIG00000018714	-	100	91.262	ENSHCOG00000014827	polr2j	66	85.965	Hippocampus_comes
ENSPTIG00000018714	-	100	93.204	ENSIPUG00000023960	polr2j	97	87.719	Ictalurus_punctatus
ENSPTIG00000018714	-	100	97.087	ENSSTOG00000006377	POLR2J	97	91.228	Ictidomys_tridecemlineatus
ENSPTIG00000018714	-	100	91.262	ENSJJAG00000018834	-	97	85.965	Jaculus_jaculus
ENSPTIG00000018714	-	100	97.087	ENSJJAG00000013854	-	97	91.228	Jaculus_jaculus
ENSPTIG00000018714	-	100	91.262	ENSKMAG00000014581	polr2j	77	85.965	Kryptolebias_marmoratus
ENSPTIG00000018714	-	100	91.262	ENSLBEG00000005885	polr2j	97	85.965	Labrus_bergylta
ENSPTIG00000018714	-	100	93.204	ENSLOCG00000001885	polr2j	86	87.719	Lepisosteus_oculatus
ENSPTIG00000018714	-	100	97.087	ENSLAFG00000021507	-	97	91.228	Loxodonta_africana
ENSPTIG00000018714	-	100	86.207	ENSMMUG00000012019	POLR2J	82	98.592	Macaca_mulatta
ENSPTIG00000018714	-	100	91.262	ENSMAMG00000009374	polr2j	97	85.965	Mastacembelus_armatus
ENSPTIG00000018714	-	100	91.262	ENSMZEG00005011932	polr2j	97	85.965	Maylandia_zebra
ENSPTIG00000018714	-	100	97.087	ENSMGAG00000003534	POLR2J	97	91.228	Meleagris_gallopavo
ENSPTIG00000018714	-	100	97.087	ENSMAUG00000013049	Polr2j	97	91.228	Mesocricetus_auratus
ENSPTIG00000018714	-	87	97.778	ENSMICG00000026811	-	90	97.778	Microcebus_murinus
ENSPTIG00000018714	-	100	97.087	ENSMOCG00000001294	Polr2j	97	91.228	Microtus_ochrogaster
ENSPTIG00000018714	-	100	90.291	ENSMMOG00000013265	polr2j	97	85.088	Mola_mola
ENSPTIG00000018714	-	100	87.719	ENSMODG00000013617	-	98	83.200	Monodelphis_domestica
ENSPTIG00000018714	-	100	91.262	ENSMALG00000020749	polr2j	97	85.965	Monopterus_albus
ENSPTIG00000018714	-	100	97.087	MGP_CAROLIEiJ_G0027851	Polr2j	97	91.228	Mus_caroli
ENSPTIG00000018714	-	100	97.087	ENSMUSG00000039771	Polr2j	97	91.228	Mus_musculus
ENSPTIG00000018714	-	100	97.087	MGP_PahariEiJ_G0024434	Polr2j	97	91.228	Mus_pahari
ENSPTIG00000018714	-	100	97.087	MGP_SPRETEiJ_G0028853	Polr2j	97	91.228	Mus_spretus
ENSPTIG00000018714	-	100	97.087	ENSMLUG00000010467	POLR2J	97	91.228	Myotis_lucifugus
ENSPTIG00000018714	-	100	97.087	ENSNGAG00000023412	Polr2j	97	91.228	Nannospalax_galili
ENSPTIG00000018714	-	60	87.097	ENSNBRG00000006580	polr2j	56	79.452	Neolamprologus_brichardi
ENSPTIG00000018714	-	100	97.087	ENSODEG00000015648	-	97	91.228	Octodon_degus
ENSPTIG00000018714	-	100	72.816	ENSODEG00000008559	-	97	67.544	Octodon_degus
ENSPTIG00000018714	-	100	91.262	ENSONIG00000000259	polr2j	97	85.965	Oreochromis_niloticus
ENSPTIG00000018714	-	100	94.175	ENSOANG00000020912	POLR2J	97	88.596	Ornithorhynchus_anatinus
ENSPTIG00000018714	-	100	88.496	ENSOCUG00000023609	POLR2J	98	83.871	Oryctolagus_cuniculus
ENSPTIG00000018714	-	100	91.262	ENSORLG00000029046	polr2j	81	85.965	Oryzias_latipes
ENSPTIG00000018714	-	100	91.262	ENSORLG00020007625	polr2j	81	85.965	Oryzias_latipes_hni
ENSPTIG00000018714	-	100	91.262	ENSORLG00015003457	polr2j	81	85.965	Oryzias_latipes_hsok
ENSPTIG00000018714	-	100	90.291	ENSOMEG00000002097	polr2j	97	85.088	Oryzias_melastigma
ENSPTIG00000018714	-	76	80.682	ENSOGAG00000008250	-	69	80.682	Otolemur_garnettii
ENSPTIG00000018714	-	100	97.087	ENSOARG00000014204	-	95	91.228	Ovis_aries
ENSPTIG00000018714	-	100	97.087	ENSPPRG00000012439	-	97	91.228	Panthera_pardus
ENSPTIG00000018714	-	96	100.000	ENSPSIG00000010173	-	99	100.000	Pelodiscus_sinensis
ENSPTIG00000018714	-	100	91.262	ENSPMGG00000021256	polr2j	97	85.965	Periophthalmus_magnuspinnatus
ENSPTIG00000018714	-	100	97.087	ENSPEMG00000015733	Polr2j	97	91.228	Peromyscus_maniculatus_bairdii
ENSPTIG00000018714	-	100	97.087	ENSPCIG00000009026	-	97	91.228	Phascolarctos_cinereus
ENSPTIG00000018714	-	100	91.262	ENSPFOG00000012001	polr2j	97	85.965	Poecilia_formosa
ENSPTIG00000018714	-	100	91.262	ENSPLAG00000014075	polr2j	97	85.965	Poecilia_latipinna
ENSPTIG00000018714	-	100	91.262	ENSPMEG00000020585	polr2j	97	85.965	Poecilia_mexicana
ENSPTIG00000018714	-	100	91.262	ENSPREG00000015255	polr2j	97	85.965	Poecilia_reticulata
ENSPTIG00000018714	-	100	97.087	ENSPCOG00000024573	-	97	91.228	Propithecus_coquereli
ENSPTIG00000018714	-	95	92.857	ENSPVAG00000017770	-	65	84.956	Pteropus_vampyrus
ENSPTIG00000018714	-	100	91.262	ENSPNYG00000014832	polr2j	97	85.965	Pundamilia_nyererei
ENSPTIG00000018714	-	100	90.291	ENSPNAG00000016595	polr2j	97	85.088	Pygocentrus_nattereri
ENSPTIG00000018714	-	100	97.087	ENSRNOG00000001430	Polr2j	97	91.228	Rattus_norvegicus
ENSPTIG00000018714	-	100	97.087	ENSSBOG00000025579	-	97	91.228	Saimiri_boliviensis_boliviensis
ENSPTIG00000018714	-	67	100.000	ENSSHAG00000010443	-	81	100.000	Sarcophilus_harrisii
ENSPTIG00000018714	-	92	90.526	ENSSFOG00015003371	polr2j	80	84.906	Scleropages_formosus
ENSPTIG00000018714	-	100	91.262	ENSSMAG00000006729	polr2j	97	85.965	Scophthalmus_maximus
ENSPTIG00000018714	-	100	91.262	ENSSDUG00000018490	polr2j	97	85.965	Seriola_dumerili
ENSPTIG00000018714	-	100	91.262	ENSSLDG00000022354	polr2j	97	85.965	Seriola_lalandi_dorsalis
ENSPTIG00000018714	-	100	97.087	ENSSPUG00000010802	-	97	91.228	Sphenodon_punctatus
ENSPTIG00000018714	-	100	91.262	ENSSPAG00000021953	polr2j	97	85.965	Stegastes_partitus
ENSPTIG00000018714	-	96	84.848	ENSSSCG00000003703	-	80	78.571	Sus_scrofa
ENSPTIG00000018714	-	100	97.087	ENSSSCG00000007688	-	97	91.228	Sus_scrofa
ENSPTIG00000018714	-	67	100.000	ENSTGUG00000004510	-	100	100.000	Taeniopygia_guttata
ENSPTIG00000018714	-	96	100.000	ENSTGUG00000004501	-	99	100.000	Taeniopygia_guttata
ENSPTIG00000018714	-	100	92.233	ENSTRUG00000020842	polr2j	97	86.842	Takifugu_rubripes
ENSPTIG00000018714	-	100	91.262	ENSTNIG00000002994	polr2j	97	85.965	Tetraodon_nigroviridis
ENSPTIG00000018714	-	86	78.652	ENSTBEG00000005797	-	68	72.115	Tupaia_belangeri
ENSPTIG00000018714	-	100	97.087	ENSUAMG00000011310	-	97	91.228	Ursus_americanus
ENSPTIG00000018714	-	100	97.087	ENSUMAG00000012594	-	97	91.228	Ursus_maritimus
ENSPTIG00000018714	-	100	95.146	ENSXETG00000001108	polr2j	97	89.474	Xenopus_tropicalis
ENSPTIG00000018714	-	100	91.262	ENSXMAG00000012422	polr2j	97	85.965	Xiphophorus_maculatus