EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000018747 (Gene tree)
Gene ID: 102954333
Gene Symbol: -
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 22725 bases
Position: chrKE722085.1:3925190-3947914
Accession: 102954333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000021843	MMR_HSR1	PF01926.23	2.2e-05	1	1
ENSPTIP00000021891	MMR_HSR1	PF01926.23	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000026240	-	3022	XM_007094022	ENSPTIP00000021843	223 (aa)	XP_007094084	UPI000298B4B9
ENSPTIT00000026295	-	486	-	ENSPTIP00000021898	162 (aa)	-	UPI000DE7CFB5
ENSPTIT00000026288	-	681	-	ENSPTIP00000021891	227 (aa)	-	UPI000DE7C0E8
ENSPTIT00000026301	-	300	-	ENSPTIP00000021904	100 (aa)	-	UPI000DE7C4AE

Gene Model

Click here to download ENSPTIG00000018747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000018747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000018747	-	67	36.601	ENSPTIG00000011013	RAB1B	68	36.601
ENSPTIG00000018747	-	68	30.380	ENSPTIG00000006927	RAB39B	78	30.625
ENSPTIG00000018747	-	51	32.759	ENSPTIG00000014452	RAB17	55	32.759
ENSPTIG00000018747	-	67	36.601	ENSPTIG00000008177	RAB5C	71	36.601
ENSPTIG00000018747	-	76	32.759	ENSPTIG00000009836	RAB30	86	33.143
ENSPTIG00000018747	-	67	35.948	ENSPTIG00000013471	RAB1A	75	35.948
ENSPTIG00000018747	-	65	30.667	ENSPTIG00000019813	MRAS	77	31.677
ENSPTIG00000018747	-	67	35.948	ENSPTIG00000021685	RAB5A	71	35.948
ENSPTIG00000018747	-	63	35.135	ENSPTIG00000007518	RAB33B	64	35.374
ENSPTIG00000018747	-	67	33.117	ENSPTIG00000021935	RAB2B	71	33.117
ENSPTIG00000018747	-	65	38.255	ENSPTIG00000011667	RAB18	70	38.889
ENSPTIG00000018747	-	67	36.129	ENSPTIG00000021637	RAB11A	71	36.129
ENSPTIG00000018747	-	69	33.544	ENSPTIG00000017871	RAB14	73	33.544
ENSPTIG00000018747	-	71	34.940	ENSPTIG00000018074	RAB7A	80	34.940
ENSPTIG00000018747	-	70	35.260	ENSPTIG00000009359	RAB9B	84	35.260
ENSPTIG00000018747	-	63	36.486	ENSPTIG00000019544	RAB33A	62	36.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000018747	-	99	89.593	ENSG00000079974	RABL2B	100	92.929	Homo_sapiens
ENSPTIG00000018747	-	99	89.593	ENSG00000144134	RABL2A	100	92.982	Homo_sapiens
ENSPTIG00000018747	-	93	78.261	ENSAPOG00000023708	rabl2	93	78.261	Acanthochromis_polyacanthus
ENSPTIG00000018747	-	100	93.833	ENSAMEG00000003173	-	100	93.833	Ailuropoda_melanoleuca
ENSPTIG00000018747	-	99	71.171	ENSACIG00000000670	rabl2	99	71.171	Amphilophus_citrinellus
ENSPTIG00000018747	-	93	78.744	ENSAOCG00000008069	rabl2	93	78.744	Amphiprion_ocellaris
ENSPTIG00000018747	-	93	78.261	ENSAPEG00000003164	rabl2	93	78.261	Amphiprion_percula
ENSPTIG00000018747	-	93	78.744	ENSATEG00000001111	rabl2	93	78.744	Anabas_testudineus
ENSPTIG00000018747	-	74	87.805	ENSACAG00000000418	-	93	87.805	Anolis_carolinensis
ENSPTIG00000018747	-	99	88.235	ENSANAG00000021001	-	97	88.235	Aotus_nancymaae
ENSPTIG00000018747	-	99	73.423	ENSACLG00000025632	rabl2	99	73.423	Astatotilapia_calliptera
ENSPTIG00000018747	-	95	78.673	ENSAMXG00000040611	rabl2	95	78.673	Astyanax_mexicanus
ENSPTIG00000018747	-	100	88.938	ENSBTAG00000004876	RABL2B	100	89.381	Bos_taurus
ENSPTIG00000018747	-	99	89.593	ENSCJAG00000018414	-	97	89.593	Callithrix_jacchus
ENSPTIG00000018747	-	100	95.516	ENSCAFG00020006938	-	100	95.516	Canis_lupus_dingo
ENSPTIG00000018747	-	100	86.147	ENSCHIG00000000591	-	100	86.580	Capra_hircus
ENSPTIG00000018747	-	99	87.783	ENSTSYG00000004323	-	97	87.783	Carlito_syrichta
ENSPTIG00000018747	-	99	89.593	ENSCPOG00000026899	-	99	89.593	Cavia_porcellus
ENSPTIG00000018747	-	99	89.593	ENSCCAG00000025944	-	97	89.593	Cebus_capucinus
ENSPTIG00000018747	-	99	88.235	ENSCATG00000034307	-	97	88.235	Cercocebus_atys
ENSPTIG00000018747	-	99	90.950	ENSCLAG00000017218	-	99	90.950	Chinchilla_lanigera
ENSPTIG00000018747	-	100	88.341	ENSCSAG00000004698	-	97	88.341	Chlorocebus_sabaeus
ENSPTIG00000018747	-	89	85.859	ENSCPBG00000011715	-	88	85.859	Chrysemys_picta_bellii
ENSPTIG00000018747	-	85	65.608	ENSCING00000004961	-	87	65.608	Ciona_intestinalis
ENSPTIG00000018747	-	81	67.778	ENSCSAVG00000006042	-	87	67.778	Ciona_savignyi
ENSPTIG00000018747	-	99	88.235	ENSCANG00000030879	-	97	88.235	Colobus_angolensis_palliatus
ENSPTIG00000018747	-	100	89.238	ENSCGRG00001021894	Rabl2	100	89.238	Cricetulus_griseus_chok1gshd
ENSPTIG00000018747	-	91	76.847	ENSCSEG00000005479	rabl2	92	76.329	Cynoglossus_semilaevis
ENSPTIG00000018747	-	96	75.117	ENSCVAG00000011432	rabl2	96	75.117	Cyprinodon_variegatus
ENSPTIG00000018747	-	91	77.833	ENSDARG00000063321	rabl2	93	77.833	Danio_rerio
ENSPTIG00000018747	-	99	94.144	ENSDNOG00000035151	-	99	94.144	Dasypus_novemcinctus
ENSPTIG00000018747	-	100	89.238	ENSDORG00000000003	Rabl2	100	89.238	Dipodomys_ordii
ENSPTIG00000018747	-	100	94.170	ENSEASG00005008239	-	100	94.170	Equus_asinus_asinus
ENSPTIG00000018747	-	100	93.722	ENSECAG00000026942	-	100	93.722	Equus_caballus
ENSPTIG00000018747	-	100	100.000	ENSFCAG00000033642	-	100	100.000	Felis_catus
ENSPTIG00000018747	-	98	89.498	ENSFDAG00000002113	-	98	89.498	Fukomys_damarensis
ENSPTIG00000018747	-	93	78.261	ENSFHEG00000015015	rabl2	78	78.261	Fundulus_heteroclitus
ENSPTIG00000018747	-	88	76.650	ENSGMOG00000018928	rabl2	100	76.650	Gadus_morhua
ENSPTIG00000018747	-	87	85.567	ENSGALG00000032458	RABL2B	92	80.769	Gallus_gallus
ENSPTIG00000018747	-	86	80.208	ENSGAFG00000005188	rabl2	95	75.587	Gambusia_affinis
ENSPTIG00000018747	-	98	72.768	ENSGACG00000012474	rabl2	100	72.646	Gasterosteus_aculeatus
ENSPTIG00000018747	-	99	73.423	ENSHBUG00000010964	rabl2	99	73.423	Haplochromis_burtoni
ENSPTIG00000018747	-	100	89.686	ENSHGLG00000005750	-	100	89.686	Heterocephalus_glaber_female
ENSPTIG00000018747	-	100	89.686	ENSHGLG00100016281	-	100	89.686	Heterocephalus_glaber_male
ENSPTIG00000018747	-	100	91.480	ENSSTOG00000002723	-	100	91.480	Ictidomys_tridecemlineatus
ENSPTIG00000018747	-	100	87.892	ENSJJAG00000010792	Rabl2	100	87.892	Jaculus_jaculus
ENSPTIG00000018747	-	99	74.324	ENSKMAG00000012723	rabl2	99	74.324	Kryptolebias_marmoratus
ENSPTIG00000018747	-	93	79.227	ENSLBEG00000003644	rabl2	93	79.227	Labrus_bergylta
ENSPTIG00000018747	-	92	81.951	ENSLACG00000003722	rabl2	92	81.951	Latimeria_chalumnae
ENSPTIG00000018747	-	92	81.553	ENSLOCG00000016767	rabl2	91	81.553	Lepisosteus_oculatus
ENSPTIG00000018747	-	99	89.593	ENSMFAG00000044775	-	97	89.593	Macaca_fascicularis
ENSPTIG00000018747	-	99	89.593	ENSMMUG00000022914	RABL2B	97	89.593	Macaca_mulatta
ENSPTIG00000018747	-	99	89.140	ENSMNEG00000028460	-	100	86.522	Macaca_nemestrina
ENSPTIG00000018747	-	99	88.235	ENSMLEG00000032621	-	100	85.652	Mandrillus_leucophaeus
ENSPTIG00000018747	-	93	78.744	ENSMAMG00000008168	rabl2	93	78.744	Mastacembelus_armatus
ENSPTIG00000018747	-	93	76.329	ENSMZEG00005019758	rabl2	95	76.329	Maylandia_zebra
ENSPTIG00000018747	-	99	87.387	ENSMAUG00000010955	Rabl2	100	87.387	Mesocricetus_auratus
ENSPTIG00000018747	-	99	94.570	ENSMICG00000031301	-	97	94.570	Microcebus_murinus
ENSPTIG00000018747	-	99	87.838	ENSMOCG00000002775	Rabl2	99	87.838	Microtus_ochrogaster
ENSPTIG00000018747	-	90	91.045	ENSMODG00000010838	-	92	91.045	Monodelphis_domestica
ENSPTIG00000018747	-	99	73.874	ENSMALG00000005944	rabl2	99	73.874	Monopterus_albus
ENSPTIG00000018747	-	100	85.650	MGP_CAROLIEiJ_G0020176	Rabl2	99	85.650	Mus_caroli
ENSPTIG00000018747	-	100	85.650	ENSMUSG00000022621	Rabl2	100	85.650	Mus_musculus
ENSPTIG00000018747	-	100	86.547	MGP_PahariEiJ_G0020181	Rabl2	100	86.547	Mus_pahari
ENSPTIG00000018747	-	100	85.650	MGP_SPRETEiJ_G0021073	Rabl2	100	85.650	Mus_spretus
ENSPTIG00000018747	-	100	95.516	ENSMPUG00000001806	-	100	95.516	Mustela_putorius_furo
ENSPTIG00000018747	-	96	87.793	ENSNGAG00000012843	Rabl2	92	87.793	Nannospalax_galili
ENSPTIG00000018747	-	99	73.423	ENSNBRG00000000489	rabl2	99	73.423	Neolamprologus_brichardi
ENSPTIG00000018747	-	99	89.593	ENSNLEG00000030435	-	100	86.522	Nomascus_leucogenys
ENSPTIG00000018747	-	100	89.238	ENSODEG00000015650	-	100	89.238	Octodon_degus
ENSPTIG00000018747	-	99	73.874	ENSONIG00000014885	rabl2	99	73.874	Oreochromis_niloticus
ENSPTIG00000018747	-	93	75.845	ENSORLG00000009874	rabl2	92	75.845	Oryzias_latipes
ENSPTIG00000018747	-	93	75.845	ENSORLG00020001721	rabl2	92	75.845	Oryzias_latipes_hni
ENSPTIG00000018747	-	93	75.845	ENSORLG00015014268	rabl2	92	75.845	Oryzias_latipes_hsok
ENSPTIG00000018747	-	93	77.295	ENSOMEG00000008576	rabl2	95	77.295	Oryzias_melastigma
ENSPTIG00000018747	-	99	94.118	ENSOGAG00000009123	-	97	94.118	Otolemur_garnettii
ENSPTIG00000018747	-	100	99.559	ENSPPRG00000014642	-	100	99.559	Panthera_pardus
ENSPTIG00000018747	-	99	84.416	ENSPTRG00000014555	-	97	84.416	Pan_troglodytes
ENSPTIG00000018747	-	100	83.613	ENSPANG00000036121	-	100	83.613	Papio_anubis
ENSPTIG00000018747	-	92	80.583	ENSPKIG00000025372	rabl2	92	80.583	Paramormyrops_kingsleyae
ENSPTIG00000018747	-	89	87.879	ENSPSIG00000014041	-	88	87.879	Pelodiscus_sinensis
ENSPTIG00000018747	-	88	77.157	ENSPMGG00000012946	rabl2	96	77.157	Periophthalmus_magnuspinnatus
ENSPTIG00000018747	-	100	88.341	ENSPEMG00000024045	Rabl2	100	88.341	Peromyscus_maniculatus_bairdii
ENSPTIG00000018747	-	89	90.909	ENSPCIG00000012436	-	81	90.909	Phascolarctos_cinereus
ENSPTIG00000018747	-	94	76.777	ENSPFOG00000017960	rabl2	95	76.777	Poecilia_formosa
ENSPTIG00000018747	-	94	77.512	ENSPLAG00000015685	rabl2	95	77.512	Poecilia_latipinna
ENSPTIG00000018747	-	94	77.512	ENSPMEG00000004703	rabl2	95	77.512	Poecilia_mexicana
ENSPTIG00000018747	-	87	78.866	ENSPREG00000014761	rabl2	96	78.866	Poecilia_reticulata
ENSPTIG00000018747	-	99	90.045	ENSPPYG00000012000	-	97	90.045	Pongo_abelii
ENSPTIG00000018747	-	99	94.570	ENSPCOG00000024865	-	97	94.570	Propithecus_coquereli
ENSPTIG00000018747	-	99	87.983	ENSPVAG00000004539	-	97	89.083	Pteropus_vampyrus
ENSPTIG00000018747	-	99	73.423	ENSPNYG00000004845	rabl2	99	73.423	Pundamilia_nyererei
ENSPTIG00000018747	-	90	80.597	ENSPNAG00000024254	rabl2	99	76.126	Pygocentrus_nattereri
ENSPTIG00000018747	-	100	87.444	ENSRNOG00000013947	Rabl2	89	87.444	Rattus_norvegicus
ENSPTIG00000018747	-	99	88.688	ENSRBIG00000033607	-	97	88.688	Rhinopithecus_bieti
ENSPTIG00000018747	-	99	89.593	ENSRROG00000031130	-	97	89.593	Rhinopithecus_roxellana
ENSPTIG00000018747	-	99	89.593	ENSSBOG00000033266	-	97	89.593	Saimiri_boliviensis_boliviensis
ENSPTIG00000018747	-	91	78.922	ENSSFOG00015020738	rabl2	100	73.333	Scleropages_formosus
ENSPTIG00000018747	-	93	77.778	ENSSMAG00000004606	rabl2	93	77.778	Scophthalmus_maximus
ENSPTIG00000018747	-	99	73.423	ENSSDUG00000014765	rabl2	99	73.423	Seriola_dumerili
ENSPTIG00000018747	-	76	94.706	ENSSSCG00000025041	-	100	94.706	Sus_scrofa
ENSPTIG00000018747	-	87	80.928	ENSTGUG00000016028	-	93	80.928	Taeniopygia_guttata
ENSPTIG00000018747	-	99	74.324	ENSTRUG00000012454	rabl2	99	74.324	Takifugu_rubripes
ENSPTIG00000018747	-	99	73.874	ENSTNIG00000017951	rabl2	99	73.874	Tetraodon_nigroviridis
ENSPTIG00000018747	-	88	97.462	ENSUAMG00000015761	-	88	97.462	Ursus_americanus
ENSPTIG00000018747	-	100	96.413	ENSUMAG00000017116	-	100	96.413	Ursus_maritimus
ENSPTIG00000018747	-	100	95.516	ENSVVUG00000025761	-	100	95.516	Vulpes_vulpes
ENSPTIG00000018747	-	95	77.830	ENSXETG00000015712	rabl2b	94	77.830	Xenopus_tropicalis
ENSPTIG00000018747	-	87	81.026	ENSXMAG00000004569	rabl2	95	76.526	Xiphophorus_maculatus