EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000018783 (Gene tree)
Gene ID: 102965012
Gene Symbol: POLR1A
Alias: -
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 74622 bases
Position: chrKE721764.1:810614-885235
Accession: 102965012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000021744	RNA_pol_Rpb1_5	PF04998.17	5.2e-104	1	1
ENSPTIP00000021744	RNA_pol_Rpb1_4	PF05000.17	4.5e-25	1	1
ENSPTIP00000021744	RNA_pol_Rpb1_2	PF00623.20	5.9e-64	1	1
ENSPTIP00000021744	RNA_pol_Rpb1_3	PF04983.18	4.3e-37	1	1
ENSPTIP00000021744	RNA_pol_Rpb1_1	PF04997.12	2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000026139	POLR1A-201	6161	XM_007082299	ENSPTIP00000021744	1724 (aa)	XP_007082361	UPI00042BB8BA

Gene Model

Click here to download ENSPTIG00000018783's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000018783's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000018783	POLR1A	55	37.584	ENSPTIG00000020916	POLR3A	65	37.584

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000018783	POLR1A	100	91.020	ENSG00000068654	POLR1A	100	91.367	Homo_sapiens
ENSPTIG00000018783	POLR1A	69	67.420	ENSAPOG00000017945	polr1a	99	67.504	Acanthochromis_polyacanthus
ENSPTIG00000018783	POLR1A	100	94.606	ENSAMEG00000005807	POLR1A	100	94.908	Ailuropoda_melanoleuca
ENSPTIG00000018783	POLR1A	100	63.121	ENSACIG00000022147	polr1a	100	62.601	Amphilophus_citrinellus
ENSPTIG00000018783	POLR1A	100	65.896	ENSAOCG00000017336	polr1a	100	67.132	Amphiprion_ocellaris
ENSPTIG00000018783	POLR1A	100	65.838	ENSAPEG00000016105	polr1a	100	65.095	Amphiprion_percula
ENSPTIG00000018783	POLR1A	100	66.244	ENSATEG00000016773	polr1a	100	66.149	Anabas_testudineus
ENSPTIG00000018783	POLR1A	86	72.312	ENSAPLG00000013871	POLR1A	99	72.654	Anas_platyrhynchos
ENSPTIG00000018783	POLR1A	99	69.280	ENSACAG00000012141	POLR1A	99	68.642	Anolis_carolinensis
ENSPTIG00000018783	POLR1A	100	90.029	ENSANAG00000033927	POLR1A	100	90.319	Aotus_nancymaae
ENSPTIG00000018783	POLR1A	100	62.370	ENSACLG00000020541	polr1a	100	61.556	Astatotilapia_calliptera
ENSPTIG00000018783	POLR1A	100	91.183	ENSBTAG00000006481	POLR1A	100	91.194	Bos_taurus
ENSPTIG00000018783	POLR1A	97	39.920	WBGene00012999	rpoa-1	98	37.801	Caenorhabditis_elegans
ENSPTIG00000018783	POLR1A	100	89.513	ENSCJAG00000019547	POLR1A	100	89.629	Callithrix_jacchus
ENSPTIG00000018783	POLR1A	100	94.722	ENSCAFG00000007613	POLR1A	100	94.722	Canis_familiaris
ENSPTIG00000018783	POLR1A	100	94.505	ENSCAFG00020014752	POLR1A	100	94.505	Canis_lupus_dingo
ENSPTIG00000018783	POLR1A	100	89.595	ENSCHIG00000018204	POLR1A	100	89.538	Capra_hircus
ENSPTIG00000018783	POLR1A	100	88.058	ENSTSYG00000002761	POLR1A	100	88.058	Carlito_syrichta
ENSPTIG00000018783	POLR1A	97	84.176	ENSCAPG00000010132	POLR1A	100	84.029	Cavia_aperea
ENSPTIG00000018783	POLR1A	100	88.644	ENSCPOG00000012350	POLR1A	100	88.644	Cavia_porcellus
ENSPTIG00000018783	POLR1A	100	89.919	ENSCCAG00000019839	POLR1A	100	90.035	Cebus_capucinus
ENSPTIG00000018783	POLR1A	100	91.194	ENSCATG00000029786	POLR1A	100	91.541	Cercocebus_atys
ENSPTIG00000018783	POLR1A	100	88.671	ENSCLAG00000005187	POLR1A	100	88.671	Chinchilla_lanigera
ENSPTIG00000018783	POLR1A	100	91.194	ENSCSAG00000016251	POLR1A	100	91.541	Chlorocebus_sabaeus
ENSPTIG00000018783	POLR1A	99	74.493	ENSCPBG00000001115	POLR1A	99	74.493	Chrysemys_picta_bellii
ENSPTIG00000018783	POLR1A	99	46.501	ENSCSAVG00000007184	-	99	46.485	Ciona_savignyi
ENSPTIG00000018783	POLR1A	100	88.361	ENSCANG00000031785	POLR1A	100	88.361	Colobus_angolensis_palliatus
ENSPTIG00000018783	POLR1A	100	82.333	ENSCGRG00001006651	Polr1a	100	82.669	Cricetulus_griseus_chok1gshd
ENSPTIG00000018783	POLR1A	60	86.350	ENSCGRG00000010834	Polr1a	100	87.112	Cricetulus_griseus_crigri
ENSPTIG00000018783	POLR1A	100	61.979	ENSCSEG00000020190	polr1a	100	61.943	Cynoglossus_semilaevis
ENSPTIG00000018783	POLR1A	100	63.911	ENSCVAG00000020941	polr1a	100	64.686	Cyprinodon_variegatus
ENSPTIG00000018783	POLR1A	100	67.091	ENSDARG00000098375	polr1a	100	66.859	Danio_rerio
ENSPTIG00000018783	POLR1A	100	83.054	ENSDNOG00000010829	POLR1A	100	83.054	Dasypus_novemcinctus
ENSPTIG00000018783	POLR1A	100	87.825	ENSDORG00000008298	Polr1a	100	87.428	Dipodomys_ordii
ENSPTIG00000018783	POLR1A	79	44.541	FBgn0019938	RpI1	99	43.231	Drosophila_melanogaster
ENSPTIG00000018783	POLR1A	72	90.625	ENSETEG00000000412	-	72	90.625	Echinops_telfairi
ENSPTIG00000018783	POLR1A	88	65.891	ENSEBUG00000005667	-	99	48.227	Eptatretus_burgeri
ENSPTIG00000018783	POLR1A	100	94.032	ENSEASG00005001625	POLR1A	100	94.148	Equus_asinus_asinus
ENSPTIG00000018783	POLR1A	100	94.032	ENSECAG00000036306	-	100	95.351	Equus_caballus
ENSPTIG00000018783	POLR1A	100	94.032	ENSECAG00000030510	-	100	95.351	Equus_caballus
ENSPTIG00000018783	POLR1A	100	94.032	ENSECAG00000010092	POLR1A	100	95.351	Equus_caballus
ENSPTIG00000018783	POLR1A	85	93.263	ENSEEUG00000000676	POLR1A	85	93.263	Erinaceus_europaeus
ENSPTIG00000018783	POLR1A	100	66.667	ENSELUG00000012769	polr1a	99	66.532	Esox_lucius
ENSPTIG00000018783	POLR1A	100	98.840	ENSFCAG00000008966	POLR1A	100	98.840	Felis_catus
ENSPTIG00000018783	POLR1A	99	71.387	ENSFALG00000010082	POLR1A	99	71.387	Ficedula_albicollis
ENSPTIG00000018783	POLR1A	100	88.361	ENSFDAG00000013726	POLR1A	100	88.188	Fukomys_damarensis
ENSPTIG00000018783	POLR1A	100	61.618	ENSFHEG00000005996	polr1a	100	61.476	Fundulus_heteroclitus
ENSPTIG00000018783	POLR1A	100	60.000	ENSGMOG00000002230	polr1a	100	59.769	Gadus_morhua
ENSPTIG00000018783	POLR1A	90	69.981	ENSGALG00000038160	-	99	70.110	Gallus_gallus
ENSPTIG00000018783	POLR1A	100	64.122	ENSGAFG00000015266	polr1a	100	63.589	Gambusia_affinis
ENSPTIG00000018783	POLR1A	100	64.516	ENSGACG00000018791	polr1a	100	64.265	Gasterosteus_aculeatus
ENSPTIG00000018783	POLR1A	90	75.469	ENSGAGG00000004984	-	96	80.427	Gopherus_agassizii
ENSPTIG00000018783	POLR1A	100	90.846	ENSGGOG00000001788	POLR1A	100	91.194	Gorilla_gorilla
ENSPTIG00000018783	POLR1A	90	64.161	ENSHBUG00000020021	polr1a	99	64.360	Haplochromis_burtoni
ENSPTIG00000018783	POLR1A	100	88.992	ENSHGLG00000006334	POLR1A	100	88.992	Heterocephalus_glaber_female
ENSPTIG00000018783	POLR1A	100	88.992	ENSHGLG00100006614	POLR1A	100	88.992	Heterocephalus_glaber_male
ENSPTIG00000018783	POLR1A	100	61.842	ENSHCOG00000003345	polr1a	100	61.839	Hippocampus_comes
ENSPTIG00000018783	POLR1A	100	65.897	ENSIPUG00000013174	polr1a	100	65.187	Ictalurus_punctatus
ENSPTIG00000018783	POLR1A	100	87.080	ENSSTOG00000012580	POLR1A	100	87.080	Ictidomys_tridecemlineatus
ENSPTIG00000018783	POLR1A	100	87.334	ENSJJAG00000013113	Polr1a	100	87.334	Jaculus_jaculus
ENSPTIG00000018783	POLR1A	100	65.238	ENSKMAG00000007399	polr1a	100	65.029	Kryptolebias_marmoratus
ENSPTIG00000018783	POLR1A	95	68.366	ENSLBEG00000015401	polr1a	99	68.033	Labrus_bergylta
ENSPTIG00000018783	POLR1A	53	75.486	ENSLACG00000003218	polr1a	100	75.486	Latimeria_chalumnae
ENSPTIG00000018783	POLR1A	100	70.110	ENSLOCG00000010881	polr1a	100	70.029	Lepisosteus_oculatus
ENSPTIG00000018783	POLR1A	100	90.006	ENSLAFG00000014948	POLR1A	100	90.254	Loxodonta_africana
ENSPTIG00000018783	POLR1A	100	91.251	ENSMFAG00000046097	POLR1A	100	91.599	Macaca_fascicularis
ENSPTIG00000018783	POLR1A	100	91.136	ENSMMUG00000015815	POLR1A	100	91.483	Macaca_mulatta
ENSPTIG00000018783	POLR1A	100	91.251	ENSMNEG00000043313	POLR1A	100	91.599	Macaca_nemestrina
ENSPTIG00000018783	POLR1A	100	90.672	ENSMLEG00000042428	POLR1A	100	91.020	Mandrillus_leucophaeus
ENSPTIG00000018783	POLR1A	100	66.532	ENSMAMG00000016565	polr1a	100	66.010	Mastacembelus_armatus
ENSPTIG00000018783	POLR1A	100	65.780	ENSMZEG00005004915	polr1a	100	65.072	Maylandia_zebra
ENSPTIG00000018783	POLR1A	99	68.981	ENSMGAG00000013111	POLR1A	99	69.097	Meleagris_gallopavo
ENSPTIG00000018783	POLR1A	92	87.036	ENSMAUG00000008497	Polr1a	100	87.036	Mesocricetus_auratus
ENSPTIG00000018783	POLR1A	100	91.314	ENSMICG00000000757	POLR1A	100	91.199	Microcebus_murinus
ENSPTIG00000018783	POLR1A	100	87.233	ENSMOCG00000000122	Polr1a	100	86.886	Microtus_ochrogaster
ENSPTIG00000018783	POLR1A	100	65.127	ENSMMOG00000010216	polr1a	100	65.260	Mola_mola
ENSPTIG00000018783	POLR1A	100	74.656	ENSMODG00000009335	POLR1A	100	74.541	Monodelphis_domestica
ENSPTIG00000018783	POLR1A	100	65.376	ENSMALG00000013363	polr1a	100	65.380	Monopterus_albus
ENSPTIG00000018783	POLR1A	100	85.904	MGP_CAROLIEiJ_G0028494	Polr1a	100	85.731	Mus_caroli
ENSPTIG00000018783	POLR1A	100	85.962	ENSMUSG00000049553	Polr1a	100	85.789	Mus_musculus
ENSPTIG00000018783	POLR1A	100	86.482	MGP_PahariEiJ_G0022230	Polr1a	100	86.308	Mus_pahari
ENSPTIG00000018783	POLR1A	100	84.336	MGP_SPRETEiJ_G0029499	Polr1a	100	84.480	Mus_spretus
ENSPTIG00000018783	POLR1A	100	94.316	ENSMPUG00000009135	POLR1A	100	94.316	Mustela_putorius_furo
ENSPTIG00000018783	POLR1A	100	90.421	ENSMLUG00000015723	POLR1A	100	90.421	Myotis_lucifugus
ENSPTIG00000018783	POLR1A	100	87.760	ENSNGAG00000017907	Polr1a	100	87.413	Nannospalax_galili
ENSPTIG00000018783	POLR1A	100	65.954	ENSNBRG00000000519	polr1a	100	65.838	Neolamprologus_brichardi
ENSPTIG00000018783	POLR1A	100	88.985	ENSNLEG00000002264	POLR1A	100	89.158	Nomascus_leucogenys
ENSPTIG00000018783	POLR1A	75	92.126	ENSMEUG00000011665	-	75	92.126	Notamacropus_eugenii
ENSPTIG00000018783	POLR1A	99	82.491	ENSOPRG00000008269	POLR1A	100	82.374	Ochotona_princeps
ENSPTIG00000018783	POLR1A	100	88.825	ENSODEG00000003542	POLR1A	100	88.940	Octodon_degus
ENSPTIG00000018783	POLR1A	100	66.205	ENSONIG00000015895	polr1a	100	65.879	Oreochromis_niloticus
ENSPTIG00000018783	POLR1A	100	89.519	ENSOCUG00000010138	POLR1A	100	89.693	Oryctolagus_cuniculus
ENSPTIG00000018783	POLR1A	100	64.277	ENSORLG00000008753	polr1a	99	64.228	Oryzias_latipes
ENSPTIG00000018783	POLR1A	100	63.589	ENSORLG00020020726	polr1a	99	63.353	Oryzias_latipes_hni
ENSPTIG00000018783	POLR1A	96	74.468	ENSORLG00015016071	polr1a	99	74.444	Oryzias_latipes_hsok
ENSPTIG00000018783	POLR1A	100	89.861	ENSOGAG00000004031	POLR1A	100	89.803	Otolemur_garnettii
ENSPTIG00000018783	POLR1A	100	90.856	ENSOARG00000020601	POLR1A	100	90.699	Ovis_aries
ENSPTIG00000018783	POLR1A	100	90.904	ENSPPAG00000042450	POLR1A	100	91.251	Pan_paniscus
ENSPTIG00000018783	POLR1A	100	99.304	ENSPPRG00000006702	POLR1A	100	99.304	Panthera_pardus
ENSPTIG00000018783	POLR1A	100	90.614	ENSPTRG00000012147	POLR1A	100	91.194	Pan_troglodytes
ENSPTIG00000018783	POLR1A	100	91.194	ENSPANG00000025908	POLR1A	100	91.541	Papio_anubis
ENSPTIG00000018783	POLR1A	94	75.694	ENSPKIG00000005468	polr1a	99	75.694	Paramormyrops_kingsleyae
ENSPTIG00000018783	POLR1A	63	72.099	ENSPSIG00000009321	-	99	71.573	Pelodiscus_sinensis
ENSPTIG00000018783	POLR1A	55	68.013	ENSPMGG00000009718	polr1a	95	68.013	Periophthalmus_magnuspinnatus
ENSPTIG00000018783	POLR1A	100	87.348	ENSPEMG00000022224	Polr1a	100	87.579	Peromyscus_maniculatus_bairdii
ENSPTIG00000018783	POLR1A	95	79.212	ENSPCIG00000004222	POLR1A	99	78.593	Phascolarctos_cinereus
ENSPTIG00000018783	POLR1A	100	64.529	ENSPFOG00000005025	polr1a	100	63.736	Poecilia_formosa
ENSPTIG00000018783	POLR1A	100	64.757	ENSPLAG00000021389	polr1a	100	64.150	Poecilia_latipinna
ENSPTIG00000018783	POLR1A	100	62.601	ENSPMEG00000006463	polr1a	100	62.099	Poecilia_mexicana
ENSPTIG00000018783	POLR1A	100	64.798	ENSPREG00000002389	polr1a	100	64.798	Poecilia_reticulata
ENSPTIG00000018783	POLR1A	100	90.267	ENSPPYG00000012217	POLR1A	100	90.614	Pongo_abelii
ENSPTIG00000018783	POLR1A	92	92.000	ENSPCAG00000011582	POLR1A	92	92.000	Procavia_capensis
ENSPTIG00000018783	POLR1A	100	91.314	ENSPCOG00000026987	POLR1A	100	91.257	Propithecus_coquereli
ENSPTIG00000018783	POLR1A	95	92.279	ENSPVAG00000012674	POLR1A	95	91.519	Pteropus_vampyrus
ENSPTIG00000018783	POLR1A	100	65.780	ENSPNYG00000000026	polr1a	100	65.072	Pundamilia_nyererei
ENSPTIG00000018783	POLR1A	100	66.128	ENSPNAG00000019223	polr1a	99	67.847	Pygocentrus_nattereri
ENSPTIG00000018783	POLR1A	100	87.579	ENSRNOG00000009545	Polr1a	100	87.406	Rattus_norvegicus
ENSPTIG00000018783	POLR1A	100	90.556	ENSRBIG00000028335	POLR1A	100	90.672	Rhinopithecus_bieti
ENSPTIG00000018783	POLR1A	100	90.498	ENSRROG00000031473	POLR1A	100	90.614	Rhinopithecus_roxellana
ENSPTIG00000018783	POLR1A	99	36.043	YOR341W	RPA190	99	36.292	Saccharomyces_cerevisiae
ENSPTIG00000018783	POLR1A	100	89.583	ENSSBOG00000030262	POLR1A	100	89.757	Saimiri_boliviensis_boliviensis
ENSPTIG00000018783	POLR1A	100	73.433	ENSSHAG00000014739	POLR1A	100	73.433	Sarcophilus_harrisii
ENSPTIG00000018783	POLR1A	100	67.227	ENSSFOG00015019716	polr1a	100	67.072	Scleropages_formosus
ENSPTIG00000018783	POLR1A	100	65.973	ENSSMAG00000014342	polr1a	100	65.802	Scophthalmus_maximus
ENSPTIG00000018783	POLR1A	100	67.244	ENSSDUG00000014631	polr1a	100	66.724	Seriola_dumerili
ENSPTIG00000018783	POLR1A	100	65.471	ENSSLDG00000024095	polr1a	100	65.014	Seriola_lalandi_dorsalis
ENSPTIG00000018783	POLR1A	75	96.809	ENSSARG00000003136	-	76	96.809	Sorex_araneus
ENSPTIG00000018783	POLR1A	94	77.949	ENSSPUG00000004215	POLR1A	98	77.949	Sphenodon_punctatus
ENSPTIG00000018783	POLR1A	65	71.300	ENSSPAG00000016341	polr1a	96	71.300	Stegastes_partitus
ENSPTIG00000018783	POLR1A	83	92.882	ENSSSCG00000008226	POLR1A	99	92.862	Sus_scrofa
ENSPTIG00000018783	POLR1A	99	70.088	ENSTGUG00000010704	POLR1A	100	70.147	Taeniopygia_guttata
ENSPTIG00000018783	POLR1A	100	64.125	ENSTRUG00000002210	polr1a	99	64.025	Takifugu_rubripes
ENSPTIG00000018783	POLR1A	100	59.747	ENSTNIG00000010116	polr1a	100	59.736	Tetraodon_nigroviridis
ENSPTIG00000018783	POLR1A	74	92.241	ENSTBEG00000008646	POLR1A	74	92.241	Tupaia_belangeri
ENSPTIG00000018783	POLR1A	100	88.341	ENSTTRG00000008597	POLR1A	100	87.877	Tursiops_truncatus
ENSPTIG00000018783	POLR1A	69	95.282	ENSUAMG00000012158	-	94	95.282	Ursus_americanus
ENSPTIG00000018783	POLR1A	100	94.490	ENSUMAG00000006700	POLR1A	100	94.490	Ursus_maritimus
ENSPTIG00000018783	POLR1A	100	94.432	ENSVVUG00000001245	POLR1A	100	94.432	Vulpes_vulpes
ENSPTIG00000018783	POLR1A	100	68.028	ENSXETG00000001952	polr1a	100	69.284	Xenopus_tropicalis
ENSPTIG00000018783	POLR1A	100	64.760	ENSXMAG00000004032	polr1a	100	64.232	Xiphophorus_maculatus