EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000018829 (Gene tree)
Gene ID: 102972243
Gene Symbol: C5orf34
Alias: -
Full Name: poly(A) binding protein interacting protein 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 75908 bases
Position: chrKE722165.1:1541088-1616995
Accession: 102971759
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000021818	PAM2	PF07145.15	3.4e-05	1	1
ENSPTIP00000021794	PAM2	PF07145.15	3.7e-05	1	1
ENSPTIP00000021812	PAM2	PF07145.15	4e-05	1	1
ENSPTIP00000021818	MIF4G	PF02854.19	2.2e-39	1	1
ENSPTIP00000021794	MIF4G	PF02854.19	2.3e-39	1	1
ENSPTIP00000021812	MIF4G	PF02854.19	2.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000026237	C5orf34-205	2052	-	ENSPTIP00000021840	606 (aa)	-	-
ENSPTIT00000026191	C5orf34-201	1662	XM_007095414	ENSPTIP00000021794	367 (aa)	XP_007095476	UPI00042BDC00
ENSPTIT00000026228	C5orf34-204	2214	XM_007095418	ENSPTIP00000021831	660 (aa)	XP_007095480	-
ENSPTIT00000026250	C5orf34-206	2868	XM_007095416	ENSPTIP00000021853	638 (aa)	XP_007095478	UPI00042BC11C
ENSPTIT00000026209	C5orf34-202	1203	-	ENSPTIP00000021812	400 (aa)	-	-
ENSPTIT00000026215	C5orf34-203	1056	-	ENSPTIP00000021818	351 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000018829's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000018829's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000018829	C5orf34	100	100.000	ENSFCAG00000011993	C5orf34	97	100.000	Felis_catus