EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000018847 (Gene tree)
Gene ID: 102957824
Gene Symbol: RPP40
Alias: -
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 9329 bases
Position: chrKE721563.1:7774795-7784123
Accession: 102957824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000021824	Ribonuc_P_40	PF08584.11	7.4e-79	1	1
ENSPTIP00000021841	Ribonuc_P_40	PF08584.11	1.2e-78	1	1
ENSPTIP00000021846	Ribonuc_P_40	PF08584.11	1.1e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000026238	RPP40-202	1077	-	ENSPTIP00000021841	358 (aa)	-	-
ENSPTIT00000026242	RPP40-203	1008	-	ENSPTIP00000021846	335 (aa)	-	-
ENSPTIT00000026221	RPP40-201	1881	XM_007073139	ENSPTIP00000021824	375 (aa)	XP_007073201	UPI00042C1900

Gene Model

Click here to download ENSPTIG00000018847's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03008	Ribosome biogenesis in eukaryotes	KEGG
ptg03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000018847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000018847	RPP40	100	80.165	ENSG00000124787	RPP40	100	80.165	Homo_sapiens
ENSPTIG00000018847	RPP40	100	84.022	ENSAMEG00000012938	RPP40	100	84.022	Ailuropoda_melanoleuca
ENSPTIG00000018847	RPP40	98	34.262	ENSACIG00000003617	rpp40	98	34.262	Amphilophus_citrinellus
ENSPTIG00000018847	RPP40	98	35.014	ENSAOCG00000011846	rpp40	99	35.014	Amphiprion_ocellaris
ENSPTIG00000018847	RPP40	98	35.014	ENSAPEG00000001322	rpp40	99	35.014	Amphiprion_percula
ENSPTIG00000018847	RPP40	98	36.648	ENSATEG00000006584	rpp40	99	36.648	Anabas_testudineus
ENSPTIG00000018847	RPP40	82	60.000	ENSAPLG00000005691	RPP40	99	60.000	Anas_platyrhynchos
ENSPTIG00000018847	RPP40	99	59.331	ENSACAG00000006550	RPP40	88	59.331	Anolis_carolinensis
ENSPTIG00000018847	RPP40	100	79.890	ENSANAG00000029246	RPP40	100	79.890	Aotus_nancymaae
ENSPTIG00000018847	RPP40	98	36.000	ENSACLG00000015883	rpp40	96	36.000	Astatotilapia_calliptera
ENSPTIG00000018847	RPP40	98	45.938	ENSAMXG00000001755	rpp40	99	45.938	Astyanax_mexicanus
ENSPTIG00000018847	RPP40	100	80.441	ENSBTAG00000003332	RPP40	100	80.441	Bos_taurus
ENSPTIG00000018847	RPP40	100	79.614	ENSCJAG00000021373	RPP40	92	88.462	Callithrix_jacchus
ENSPTIG00000018847	RPP40	100	84.022	ENSCAFG00000009435	RPP40	100	84.022	Canis_familiaris
ENSPTIG00000018847	RPP40	100	84.022	ENSCAFG00020013380	RPP40	100	84.022	Canis_lupus_dingo
ENSPTIG00000018847	RPP40	100	80.992	ENSCHIG00000016849	RPP40	100	80.992	Capra_hircus
ENSPTIG00000018847	RPP40	100	83.196	ENSTSYG00000032857	RPP40	100	83.196	Carlito_syrichta
ENSPTIG00000018847	RPP40	90	71.254	ENSCAPG00000004957	RPP40	98	71.254	Cavia_aperea
ENSPTIG00000018847	RPP40	100	79.890	ENSCPOG00000005855	RPP40	100	79.890	Cavia_porcellus
ENSPTIG00000018847	RPP40	100	79.614	ENSCCAG00000019809	RPP40	100	79.614	Cebus_capucinus
ENSPTIG00000018847	RPP40	100	79.614	ENSCATG00000038787	RPP40	100	79.614	Cercocebus_atys
ENSPTIG00000018847	RPP40	100	80.716	ENSCLAG00000003235	RPP40	100	80.716	Chinchilla_lanigera
ENSPTIG00000018847	RPP40	100	79.614	ENSCSAG00000007307	RPP40	100	79.614	Chlorocebus_sabaeus
ENSPTIG00000018847	RPP40	55	92.793	ENSCHOG00000005856	-	74	92.793	Choloepus_hoffmanni
ENSPTIG00000018847	RPP40	99	65.000	ENSCPBG00000009003	RPP40	99	65.000	Chrysemys_picta_bellii
ENSPTIG00000018847	RPP40	100	79.890	ENSCANG00000033965	RPP40	100	79.890	Colobus_angolensis_palliatus
ENSPTIG00000018847	RPP40	100	74.105	ENSCGRG00001018328	Rpp40	100	74.105	Cricetulus_griseus_chok1gshd
ENSPTIG00000018847	RPP40	100	74.105	ENSCGRG00000011344	Rpp40	100	74.105	Cricetulus_griseus_crigri
ENSPTIG00000018847	RPP40	98	33.714	ENSCSEG00000015006	-	98	33.714	Cynoglossus_semilaevis
ENSPTIG00000018847	RPP40	74	30.970	ENSCVAG00000012169	rpp40	100	30.970	Cyprinodon_variegatus
ENSPTIG00000018847	RPP40	99	47.486	ENSDARG00000017605	rpp40	99	47.486	Danio_rerio
ENSPTIG00000018847	RPP40	82	75.084	ENSDNOG00000048136	RPP40	99	75.084	Dasypus_novemcinctus
ENSPTIG00000018847	RPP40	100	58.757	ENSDORG00000011196	-	100	58.757	Dipodomys_ordii
ENSPTIG00000018847	RPP40	100	77.135	ENSDORG00000029944	-	100	77.135	Dipodomys_ordii
ENSPTIG00000018847	RPP40	90	84.270	ENSETEG00000007458	RPP40	85	84.270	Echinops_telfairi
ENSPTIG00000018847	RPP40	98	40.563	ENSEBUG00000000386	rpp40	99	40.563	Eptatretus_burgeri
ENSPTIG00000018847	RPP40	100	84.573	ENSEASG00005012116	RPP40	80	84.573	Equus_asinus_asinus
ENSPTIG00000018847	RPP40	100	85.124	ENSECAG00000017247	RPP40	80	85.124	Equus_caballus
ENSPTIG00000018847	RPP40	67	92.683	ENSEEUG00000012087	RPP40	78	92.683	Erinaceus_europaeus
ENSPTIG00000018847	RPP40	98	45.251	ENSELUG00000017004	rpp40	99	45.251	Esox_lucius
ENSPTIG00000018847	RPP40	100	90.358	ENSFCAG00000009249	RPP40	100	90.358	Felis_catus
ENSPTIG00000018847	RPP40	86	59.327	ENSFALG00000013166	RPP40	100	59.327	Ficedula_albicollis
ENSPTIG00000018847	RPP40	100	82.920	ENSFDAG00000013001	-	100	82.920	Fukomys_damarensis
ENSPTIG00000018847	RPP40	80	66.551	ENSFDAG00000000265	-	99	66.551	Fukomys_damarensis
ENSPTIG00000018847	RPP40	98	37.815	ENSFHEG00000021429	rpp40	88	37.815	Fundulus_heteroclitus
ENSPTIG00000018847	RPP40	89	35.423	ENSGMOG00000018653	rpp40	100	35.423	Gadus_morhua
ENSPTIG00000018847	RPP40	99	58.611	ENSGALG00000036074	RPP40	99	58.611	Gallus_gallus
ENSPTIG00000018847	RPP40	83	31.190	ENSGAFG00000004189	-	98	32.095	Gambusia_affinis
ENSPTIG00000018847	RPP40	98	36.080	ENSGACG00000002472	rpp40	99	36.080	Gasterosteus_aculeatus
ENSPTIG00000018847	RPP40	99	64.444	ENSGAGG00000012918	RPP40	99	64.444	Gopherus_agassizii
ENSPTIG00000018847	RPP40	100	80.441	ENSGGOG00000013764	RPP40	100	80.441	Gorilla_gorilla
ENSPTIG00000018847	RPP40	91	35.583	ENSHBUG00000009378	rpp40	94	35.583	Haplochromis_burtoni
ENSPTIG00000018847	RPP40	100	82.094	ENSHGLG00000004871	RPP40	100	82.094	Heterocephalus_glaber_female
ENSPTIG00000018847	RPP40	100	82.094	ENSHGLG00100002080	RPP40	100	82.094	Heterocephalus_glaber_male
ENSPTIG00000018847	RPP40	99	44.321	ENSIPUG00000008951	RPP40	99	44.321	Ictalurus_punctatus
ENSPTIG00000018847	RPP40	100	80.441	ENSSTOG00000011199	RPP40	100	80.441	Ictidomys_tridecemlineatus
ENSPTIG00000018847	RPP40	100	73.278	ENSJJAG00000020629	Rpp40	100	73.278	Jaculus_jaculus
ENSPTIG00000018847	RPP40	98	34.943	ENSKMAG00000019358	rpp40	99	34.943	Kryptolebias_marmoratus
ENSPTIG00000018847	RPP40	98	36.111	ENSLBEG00000022724	rpp40	99	36.111	Labrus_bergylta
ENSPTIG00000018847	RPP40	99	54.722	ENSLACG00000014848	RPP40	99	54.722	Latimeria_chalumnae
ENSPTIG00000018847	RPP40	100	50.000	ENSLOCG00000011650	rpp40	100	50.000	Lepisosteus_oculatus
ENSPTIG00000018847	RPP40	83	79.538	ENSLAFG00000007530	RPP40	100	79.538	Loxodonta_africana
ENSPTIG00000018847	RPP40	100	79.614	ENSMFAG00000043100	RPP40	100	79.614	Macaca_fascicularis
ENSPTIG00000018847	RPP40	100	79.890	ENSMMUG00000004966	RPP40	100	79.890	Macaca_mulatta
ENSPTIG00000018847	RPP40	100	79.890	ENSMNEG00000041986	RPP40	100	79.890	Macaca_nemestrina
ENSPTIG00000018847	RPP40	98	70.028	ENSMLEG00000040851	RPP40	100	70.028	Mandrillus_leucophaeus
ENSPTIG00000018847	RPP40	98	37.110	ENSMAMG00000019551	rpp40	98	37.110	Mastacembelus_armatus
ENSPTIG00000018847	RPP40	99	36.517	ENSMZEG00005019475	rpp40	99	36.517	Maylandia_zebra
ENSPTIG00000018847	RPP40	99	55.833	ENSMGAG00000004009	RPP40	99	55.833	Meleagris_gallopavo
ENSPTIG00000018847	RPP40	100	77.961	ENSMAUG00000010268	Rpp40	100	77.961	Mesocricetus_auratus
ENSPTIG00000018847	RPP40	100	82.094	ENSMICG00000003297	RPP40	100	81.471	Microcebus_murinus
ENSPTIG00000018847	RPP40	100	76.765	ENSMOCG00000000305	Rpp40	100	76.765	Microtus_ochrogaster
ENSPTIG00000018847	RPP40	98	31.818	ENSMMOG00000020591	-	99	31.818	Mola_mola
ENSPTIG00000018847	RPP40	100	74.176	ENSMODG00000009826	RPP40	100	74.176	Monodelphis_domestica
ENSPTIG00000018847	RPP40	98	35.833	ENSMALG00000020133	rpp40	99	35.833	Monopterus_albus
ENSPTIG00000018847	RPP40	100	77.568	MGP_CAROLIEiJ_G0018429	Rpp40	100	77.568	Mus_caroli
ENSPTIG00000018847	RPP40	100	78.415	ENSMUSG00000021418	Rpp40	100	78.415	Mus_musculus
ENSPTIG00000018847	RPP40	100	78.788	MGP_PahariEiJ_G0019497	Rpp40	100	78.788	Mus_pahari
ENSPTIG00000018847	RPP40	100	78.378	MGP_SPRETEiJ_G0019309	Rpp40	100	78.378	Mus_spretus
ENSPTIG00000018847	RPP40	100	83.196	ENSMPUG00000000530	RPP40	93	83.196	Mustela_putorius_furo
ENSPTIG00000018847	RPP40	100	82.094	ENSMLUG00000000501	RPP40	100	82.094	Myotis_lucifugus
ENSPTIG00000018847	RPP40	100	80.165	ENSNGAG00000023955	-	100	80.165	Nannospalax_galili
ENSPTIG00000018847	RPP40	95	69.942	ENSNGAG00000022529	-	100	69.942	Nannospalax_galili
ENSPTIG00000018847	RPP40	87	34.237	ENSNBRG00000017465	rpp40	86	34.448	Neolamprologus_brichardi
ENSPTIG00000018847	RPP40	100	79.614	ENSNLEG00000034397	RPP40	100	79.614	Nomascus_leucogenys
ENSPTIG00000018847	RPP40	100	68.871	ENSMEUG00000005300	RPP40	100	68.871	Notamacropus_eugenii
ENSPTIG00000018847	RPP40	100	74.931	ENSODEG00000018153	-	100	74.931	Octodon_degus
ENSPTIG00000018847	RPP40	88	75.920	ENSODEG00000006170	-	100	75.920	Octodon_degus
ENSPTIG00000018847	RPP40	100	78.512	ENSODEG00000007255	-	100	78.512	Octodon_degus
ENSPTIG00000018847	RPP40	99	37.079	ENSONIG00000014016	rpp40	99	37.079	Oreochromis_niloticus
ENSPTIG00000018847	RPP40	83	66.337	ENSOANG00000001200	RPP40	99	66.337	Ornithorhynchus_anatinus
ENSPTIG00000018847	RPP40	99	71.625	ENSOCUG00000000354	RPP40	99	71.625	Oryctolagus_cuniculus
ENSPTIG00000018847	RPP40	99	34.160	ENSORLG00000008242	-	100	34.648	Oryzias_latipes
ENSPTIG00000018847	RPP40	99	34.160	ENSORLG00020013745	-	91	35.000	Oryzias_latipes_hni
ENSPTIG00000018847	RPP40	99	34.435	ENSORLG00015000887	-	100	34.930	Oryzias_latipes_hsok
ENSPTIG00000018847	RPP40	99	35.775	ENSOMEG00000002747	rpp40	100	35.775	Oryzias_melastigma
ENSPTIG00000018847	RPP40	100	82.094	ENSOGAG00000006055	RPP40	100	82.094	Otolemur_garnettii
ENSPTIG00000018847	RPP40	91	75.976	ENSOARG00000018783	RPP40	100	77.558	Ovis_aries
ENSPTIG00000018847	RPP40	100	79.890	ENSPPAG00000023703	RPP40	100	79.890	Pan_paniscus
ENSPTIG00000018847	RPP40	100	90.083	ENSPPRG00000005612	RPP40	100	90.083	Panthera_pardus
ENSPTIG00000018847	RPP40	100	80.441	ENSPTRG00000017690	RPP40	100	80.441	Pan_troglodytes
ENSPTIG00000018847	RPP40	100	79.890	ENSPANG00000017865	RPP40	100	79.890	Papio_anubis
ENSPTIG00000018847	RPP40	99	47.765	ENSPKIG00000006311	rpp40	99	47.765	Paramormyrops_kingsleyae
ENSPTIG00000018847	RPP40	65	59.459	ENSPSIG00000007854	RPP40	100	59.459	Pelodiscus_sinensis
ENSPTIG00000018847	RPP40	92	72.930	ENSPEMG00000020809	Rpp40	91	72.930	Peromyscus_maniculatus_bairdii
ENSPTIG00000018847	RPP40	81	37.993	ENSPMAG00000008412	rpp40	99	42.182	Petromyzon_marinus
ENSPTIG00000018847	RPP40	100	75.482	ENSPCIG00000010682	RPP40	100	75.482	Phascolarctos_cinereus
ENSPTIG00000018847	RPP40	98	34.463	ENSPFOG00000011460	rpp40	98	34.463	Poecilia_formosa
ENSPTIG00000018847	RPP40	98	34.943	ENSPLAG00000001334	rpp40	99	34.943	Poecilia_latipinna
ENSPTIG00000018847	RPP40	98	34.659	ENSPMEG00000007721	rpp40	99	34.659	Poecilia_mexicana
ENSPTIG00000018847	RPP40	98	35.311	ENSPREG00000009215	rpp40	99	35.311	Poecilia_reticulata
ENSPTIG00000018847	RPP40	100	79.890	ENSPPYG00000016194	RPP40	100	79.890	Pongo_abelii
ENSPTIG00000018847	RPP40	51	88.043	ENSPCAG00000002700	-	99	88.043	Procavia_capensis
ENSPTIG00000018847	RPP40	100	83.471	ENSPCOG00000003907	RPP40	100	83.471	Propithecus_coquereli
ENSPTIG00000018847	RPP40	100	84.298	ENSPVAG00000011325	RPP40	100	84.298	Pteropus_vampyrus
ENSPTIG00000018847	RPP40	82	35.714	ENSPNYG00000004432	rpp40	98	35.714	Pundamilia_nyererei
ENSPTIG00000018847	RPP40	98	44.134	ENSPNAG00000019125	rpp40	99	44.134	Pygocentrus_nattereri
ENSPTIG00000018847	RPP40	100	77.686	ENSRNOG00000016226	Rpp40	100	77.686	Rattus_norvegicus
ENSPTIG00000018847	RPP40	100	80.165	ENSRBIG00000035800	RPP40	100	80.165	Rhinopithecus_bieti
ENSPTIG00000018847	RPP40	100	80.165	ENSRROG00000039116	RPP40	100	80.165	Rhinopithecus_roxellana
ENSPTIG00000018847	RPP40	100	79.339	ENSSBOG00000020297	RPP40	100	79.339	Saimiri_boliviensis_boliviensis
ENSPTIG00000018847	RPP40	76	69.424	ENSSHAG00000002102	RPP40	100	69.424	Sarcophilus_harrisii
ENSPTIG00000018847	RPP40	99	45.856	ENSSFOG00015001142	rpp40	81	45.856	Scleropages_formosus
ENSPTIG00000018847	RPP40	98	35.278	ENSSDUG00000007202	rpp40	99	35.278	Seriola_dumerili
ENSPTIG00000018847	RPP40	98	35.556	ENSSLDG00000017563	rpp40	99	35.556	Seriola_lalandi_dorsalis
ENSPTIG00000018847	RPP40	81	61.905	ENSSPUG00000018950	-	100	61.905	Sphenodon_punctatus
ENSPTIG00000018847	RPP40	99	62.222	ENSSPUG00000017487	-	99	62.222	Sphenodon_punctatus
ENSPTIG00000018847	RPP40	98	35.227	ENSSPAG00000022716	rpp40	99	35.227	Stegastes_partitus
ENSPTIG00000018847	RPP40	100	77.961	ENSSSCG00000000998	RPP40	100	77.961	Sus_scrofa
ENSPTIG00000018847	RPP40	51	57.627	ENSTGUG00000015246	-	100	57.627	Taeniopygia_guttata
ENSPTIG00000018847	RPP40	99	60.056	ENSTGUG00000002258	-	100	60.056	Taeniopygia_guttata
ENSPTIG00000018847	RPP40	97	36.676	ENSTRUG00000003755	rpp40	98	36.676	Takifugu_rubripes
ENSPTIG00000018847	RPP40	97	35.311	ENSTNIG00000003077	rpp40	98	35.311	Tetraodon_nigroviridis
ENSPTIG00000018847	RPP40	73	48.000	ENSTBEG00000014467	-	73	48.000	Tupaia_belangeri
ENSPTIG00000018847	RPP40	99	74.862	ENSTTRG00000007319	RPP40	100	74.862	Tursiops_truncatus
ENSPTIG00000018847	RPP40	100	84.573	ENSUAMG00000002159	RPP40	100	84.573	Ursus_americanus
ENSPTIG00000018847	RPP40	100	84.573	ENSUMAG00000018639	RPP40	94	84.573	Ursus_maritimus
ENSPTIG00000018847	RPP40	81	59.184	ENSVPAG00000004652	-	99	59.184	Vicugna_pacos
ENSPTIG00000018847	RPP40	100	83.747	ENSVVUG00000005451	RPP40	100	83.747	Vulpes_vulpes
ENSPTIG00000018847	RPP40	99	49.315	ENSXETG00000017617	rpp40	100	49.315	Xenopus_tropicalis
ENSPTIG00000018847	RPP40	55	44.167	ENSXCOG00000019991	-	70	39.610	Xiphophorus_couchianus
ENSPTIG00000018847	RPP40	98	31.988	ENSXMAG00000024940	rpp40	98	31.988	Xiphophorus_maculatus