EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000018881 (Gene tree)
Gene ID: 102967345
Gene Symbol: HFM1
Alias: -
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 84298 bases
Position: chrKE721587.1:38477-122774
Accession: 102967345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000021890	ResIII	PF04851.15	7e-11	1	1
ENSPTIP00000021890	DEAD	PF00270.29	3.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000026287	HFM1-201	4323	XM_007073755	ENSPTIP00000021890	1440 (aa)	XP_007073817	-

Gene Model

Click here to download ENSPTIG00000018881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000018881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000018881	HFM1	58	31.098	ENSPTIG00000006380	SNRNP200	75	31.098
ENSPTIG00000018881	HFM1	50	35.573	ENSPTIG00000006331	ASCC3	60	35.573

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000018881	HFM1	100	86.319	ENSG00000162669	HFM1	100	86.319	Homo_sapiens
ENSPTIG00000018881	HFM1	58	65.758	ENSAPOG00000005304	hfm1	95	65.758	Acanthochromis_polyacanthus
ENSPTIG00000018881	HFM1	100	92.014	ENSAMEG00000000432	HFM1	100	92.014	Ailuropoda_melanoleuca
ENSPTIG00000018881	HFM1	73	58.851	ENSACIG00000021553	hfm1	95	58.851	Amphilophus_citrinellus
ENSPTIG00000018881	HFM1	58	66.033	ENSAOCG00000022839	hfm1	96	68.979	Amphiprion_ocellaris
ENSPTIG00000018881	HFM1	55	69.153	ENSAPEG00000014316	hfm1	96	69.153	Amphiprion_percula
ENSPTIG00000018881	HFM1	66	64.463	ENSATEG00000019181	hfm1	80	63.716	Anabas_testudineus
ENSPTIG00000018881	HFM1	100	60.834	ENSAPLG00000013639	HFM1	100	60.834	Anas_platyrhynchos
ENSPTIG00000018881	HFM1	100	82.732	ENSANAG00000029513	HFM1	100	82.732	Aotus_nancymaae
ENSPTIG00000018881	HFM1	69	59.784	ENSACLG00000009033	hfm1	96	64.988	Astatotilapia_calliptera
ENSPTIG00000018881	HFM1	85	55.047	ENSAMXG00000006108	hfm1	83	55.047	Astyanax_mexicanus
ENSPTIG00000018881	HFM1	100	87.361	ENSBTAG00000020856	HFM1	100	87.361	Bos_taurus
ENSPTIG00000018881	HFM1	100	84.514	ENSCJAG00000001843	HFM1	100	84.514	Callithrix_jacchus
ENSPTIG00000018881	HFM1	100	91.458	ENSCAFG00000020187	HFM1	100	91.458	Canis_familiaris
ENSPTIG00000018881	HFM1	100	84.258	ENSTSYG00000014250	HFM1	100	84.258	Carlito_syrichta
ENSPTIG00000018881	HFM1	99	79.569	ENSCPOG00000007421	HFM1	99	79.569	Cavia_porcellus
ENSPTIG00000018881	HFM1	100	84.375	ENSCCAG00000033206	HFM1	100	84.375	Cebus_capucinus
ENSPTIG00000018881	HFM1	100	85.417	ENSCATG00000030987	HFM1	100	85.417	Cercocebus_atys
ENSPTIG00000018881	HFM1	100	80.660	ENSCLAG00000005173	HFM1	99	80.660	Chinchilla_lanigera
ENSPTIG00000018881	HFM1	68	94.737	ENSCHOG00000011824	-	77	94.737	Choloepus_hoffmanni
ENSPTIG00000018881	HFM1	100	73.292	ENSCGRG00001016995	Hfm1	100	73.292	Cricetulus_griseus_chok1gshd
ENSPTIG00000018881	HFM1	100	77.516	ENSCGRG00000017181	Hfm1	100	77.516	Cricetulus_griseus_crigri
ENSPTIG00000018881	HFM1	71	60.405	ENSCSEG00000017659	hfm1	94	60.405	Cynoglossus_semilaevis
ENSPTIG00000018881	HFM1	76	56.014	ENSDARG00000104288	hfm1	96	56.014	Danio_rerio
ENSPTIG00000018881	HFM1	100	80.660	ENSDNOG00000004776	HFM1	100	80.660	Dasypus_novemcinctus
ENSPTIG00000018881	HFM1	100	77.503	ENSDORG00000014661	Hfm1	100	77.503	Dipodomys_ordii
ENSPTIG00000018881	HFM1	71	86.595	ENSEASG00005015424	HFM1	98	86.595	Equus_asinus_asinus
ENSPTIG00000018881	HFM1	100	86.599	ENSECAG00000024039	HFM1	100	86.599	Equus_caballus
ENSPTIG00000018881	HFM1	63	67.838	ENSELUG00000018944	hfm1	98	67.838	Esox_lucius
ENSPTIG00000018881	HFM1	100	99.167	ENSFCAG00000029116	HFM1	100	99.167	Felis_catus
ENSPTIG00000018881	HFM1	100	60.027	ENSFALG00000001781	HFM1	100	60.479	Ficedula_albicollis
ENSPTIG00000018881	HFM1	100	79.209	ENSFDAG00000020816	HFM1	100	79.209	Fukomys_damarensis
ENSPTIG00000018881	HFM1	66	61.169	ENSGMOG00000017436	hfm1	99	61.169	Gadus_morhua
ENSPTIG00000018881	HFM1	71	62.173	ENSGAFG00000018093	hfm1	92	67.558	Gambusia_affinis
ENSPTIG00000018881	HFM1	66	61.515	ENSGACG00000015686	hfm1	100	61.515	Gasterosteus_aculeatus
ENSPTIG00000018881	HFM1	100	86.042	ENSGGOG00000038524	HFM1	100	86.042	Gorilla_gorilla
ENSPTIG00000018881	HFM1	64	64.700	ENSHBUG00000007309	hfm1	95	60.659	Haplochromis_burtoni
ENSPTIG00000018881	HFM1	56	64.461	ENSHCOG00000019632	hfm1	97	64.461	Hippocampus_comes
ENSPTIG00000018881	HFM1	65	65.129	ENSIPUG00000017020	hfm1	92	65.714	Ictalurus_punctatus
ENSPTIG00000018881	HFM1	100	77.500	ENSJJAG00000017198	Hfm1	100	77.500	Jaculus_jaculus
ENSPTIG00000018881	HFM1	62	62.708	ENSKMAG00000002282	hfm1	90	62.708	Kryptolebias_marmoratus
ENSPTIG00000018881	HFM1	71	60.488	ENSLBEG00000006759	hfm1	96	65.830	Labrus_bergylta
ENSPTIG00000018881	HFM1	68	69.688	ENSLACG00000010698	HFM1	100	67.105	Latimeria_chalumnae
ENSPTIG00000018881	HFM1	74	63.678	ENSLOCG00000004931	hfm1	99	63.771	Lepisosteus_oculatus
ENSPTIG00000018881	HFM1	52	90.040	ENSLAFG00000015903	-	99	90.040	Loxodonta_africana
ENSPTIG00000018881	HFM1	100	82.467	ENSMFAG00000003649	HFM1	100	82.467	Macaca_fascicularis
ENSPTIG00000018881	HFM1	100	84.931	ENSMMUG00000006819	HFM1	100	84.931	Macaca_mulatta
ENSPTIG00000018881	HFM1	54	69.487	ENSMAMG00000004623	hfm1	97	65.942	Mastacembelus_armatus
ENSPTIG00000018881	HFM1	69	59.784	ENSMZEG00005004679	hfm1	96	64.988	Maylandia_zebra
ENSPTIG00000018881	HFM1	54	78.217	ENSMGAG00000008437	HFM1	98	78.217	Meleagris_gallopavo
ENSPTIG00000018881	HFM1	100	77.254	ENSMAUG00000018858	Hfm1	100	77.254	Mesocricetus_auratus
ENSPTIG00000018881	HFM1	100	84.941	ENSMICG00000037935	HFM1	100	84.941	Microcebus_murinus
ENSPTIG00000018881	HFM1	100	76.042	ENSMOCG00000014812	Hfm1	100	76.042	Microtus_ochrogaster
ENSPTIG00000018881	HFM1	62	63.861	ENSMMOG00000006148	hfm1	96	63.921	Mola_mola
ENSPTIG00000018881	HFM1	69	60.654	ENSMALG00000002401	hfm1	94	66.546	Monopterus_albus
ENSPTIG00000018881	HFM1	95	72.978	MGP_CAROLIEiJ_G0027496	Hfm1	100	72.978	Mus_caroli
ENSPTIG00000018881	HFM1	100	76.667	ENSMUSG00000043410	Hfm1	100	76.667	Mus_musculus
ENSPTIG00000018881	HFM1	100	76.319	MGP_PahariEiJ_G0017268	Hfm1	100	76.319	Mus_pahari
ENSPTIG00000018881	HFM1	100	76.528	MGP_SPRETEiJ_G0028495	Hfm1	100	76.528	Mus_spretus
ENSPTIG00000018881	HFM1	100	87.811	ENSMPUG00000004594	HFM1	100	87.811	Mustela_putorius_furo
ENSPTIG00000018881	HFM1	100	84.397	ENSMLUG00000010200	HFM1	100	84.397	Myotis_lucifugus
ENSPTIG00000018881	HFM1	69	57.087	ENSNBRG00000002910	hfm1	97	65.212	Neolamprologus_brichardi
ENSPTIG00000018881	HFM1	100	82.039	ENSNLEG00000010285	HFM1	100	82.039	Nomascus_leucogenys
ENSPTIG00000018881	HFM1	84	67.816	ENSMEUG00000015788	HFM1	84	67.816	Notamacropus_eugenii
ENSPTIG00000018881	HFM1	84	76.422	ENSOPRG00000013916	HFM1	84	76.422	Ochotona_princeps
ENSPTIG00000018881	HFM1	71	61.716	ENSONIG00000010590	hfm1	100	61.678	Oreochromis_niloticus
ENSPTIG00000018881	HFM1	56	65.560	ENSORLG00000026844	hfm1	99	65.560	Oryzias_latipes
ENSPTIG00000018881	HFM1	68	55.589	ENSORLG00020002951	hfm1	77	55.589	Oryzias_latipes_hni
ENSPTIG00000018881	HFM1	72	58.684	ENSOMEG00000016474	hfm1	75	58.684	Oryzias_melastigma
ENSPTIG00000018881	HFM1	85	87.205	ENSOGAG00000032369	HFM1	99	87.205	Otolemur_garnettii
ENSPTIG00000018881	HFM1	100	87.162	ENSOARG00000015812	HFM1	100	87.162	Ovis_aries
ENSPTIG00000018881	HFM1	92	87.641	ENSPPAG00000024582	HFM1	99	87.641	Pan_paniscus
ENSPTIG00000018881	HFM1	100	99.722	ENSPPRG00000003270	HFM1	100	99.722	Panthera_pardus
ENSPTIG00000018881	HFM1	100	86.389	ENSPTRG00000000948	HFM1	100	86.389	Pan_troglodytes
ENSPTIG00000018881	HFM1	100	85.208	ENSPANG00000009838	HFM1	100	85.208	Papio_anubis
ENSPTIG00000018881	HFM1	73	61.006	ENSPKIG00000003810	hfm1	95	68.491	Paramormyrops_kingsleyae
ENSPTIG00000018881	HFM1	57	65.417	ENSPMGG00000011059	hfm1	100	65.417	Periophthalmus_magnuspinnatus
ENSPTIG00000018881	HFM1	100	78.611	ENSPEMG00000022852	Hfm1	100	78.611	Peromyscus_maniculatus_bairdii
ENSPTIG00000018881	HFM1	100	67.517	ENSPCIG00000014233	HFM1	100	67.517	Phascolarctos_cinereus
ENSPTIG00000018881	HFM1	71	62.797	ENSPFOG00000017194	hfm1	100	63.083	Poecilia_formosa
ENSPTIG00000018881	HFM1	71	63.549	ENSPLAG00000000571	hfm1	92	63.549	Poecilia_latipinna
ENSPTIG00000018881	HFM1	71	63.452	ENSPMEG00000019475	hfm1	93	63.452	Poecilia_mexicana
ENSPTIG00000018881	HFM1	71	63.503	ENSPREG00000007803	hfm1	92	67.153	Poecilia_reticulata
ENSPTIG00000018881	HFM1	100	85.903	ENSPPYG00000001163	HFM1	100	85.903	Pongo_abelii
ENSPTIG00000018881	HFM1	70	78.027	ENSPCAG00000004289	-	70	78.027	Procavia_capensis
ENSPTIG00000018881	HFM1	100	78.819	ENSPVAG00000009713	HFM1	100	78.819	Pteropus_vampyrus
ENSPTIG00000018881	HFM1	64	63.383	ENSPNYG00000001795	hfm1	96	64.988	Pundamilia_nyererei
ENSPTIG00000018881	HFM1	59	67.730	ENSPNAG00000010865	hfm1	84	67.730	Pygocentrus_nattereri
ENSPTIG00000018881	HFM1	100	75.278	ENSRNOG00000023299	Hfm1	100	75.278	Rattus_norvegicus
ENSPTIG00000018881	HFM1	100	85.208	ENSRROG00000045569	HFM1	100	85.208	Rhinopithecus_roxellana
ENSPTIG00000018881	HFM1	100	82.292	ENSSBOG00000027456	HFM1	100	82.292	Saimiri_boliviensis_boliviensis
ENSPTIG00000018881	HFM1	60	72.171	ENSSHAG00000014616	-	98	72.171	Sarcophilus_harrisii
ENSPTIG00000018881	HFM1	100	49.580	ENSSFOG00015020129	hfm1	100	49.580	Scleropages_formosus
ENSPTIG00000018881	HFM1	62	65.587	ENSSMAG00000006907	hfm1	88	64.770	Scophthalmus_maximus
ENSPTIG00000018881	HFM1	57	66.264	ENSSDUG00000011424	hfm1	93	66.264	Seriola_dumerili
ENSPTIG00000018881	HFM1	58	66.386	ENSSLDG00000016386	hfm1	92	66.386	Seriola_lalandi_dorsalis
ENSPTIG00000018881	HFM1	70	58.563	ENSSPAG00000001023	hfm1	96	65.930	Stegastes_partitus
ENSPTIG00000018881	HFM1	100	83.232	ENSSSCG00000006912	HFM1	99	84.741	Sus_scrofa
ENSPTIG00000018881	HFM1	66	76.594	ENSTGUG00000006172	HFM1	100	76.594	Taeniopygia_guttata
ENSPTIG00000018881	HFM1	100	83.276	ENSTTRG00000013933	HFM1	100	83.276	Tursiops_truncatus
ENSPTIG00000018881	HFM1	93	85.815	ENSVPAG00000011331	HFM1	93	85.815	Vicugna_pacos
ENSPTIG00000018881	HFM1	70	86.060	ENSVVUG00000020760	HFM1	96	89.130	Vulpes_vulpes
ENSPTIG00000018881	HFM1	58	66.627	ENSXMAG00000004178	hfm1	93	66.627	Xiphophorus_maculatus