EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000018958 (Gene tree)
Gene ID: -
Gene Symbol: GTF3A
Alias: -
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 11675 bases
Position: chrKE721605.1:3307977-3319651
Accession: 102956990
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000022007	zf-C2H2	PF00096.26	1.1e-32	1	6
ENSPTIP00000022007	zf-C2H2	PF00096.26	1.1e-32	2	6
ENSPTIP00000022007	zf-C2H2	PF00096.26	1.1e-32	3	6
ENSPTIP00000022007	zf-C2H2	PF00096.26	1.1e-32	4	6
ENSPTIP00000022007	zf-C2H2	PF00096.26	1.1e-32	5	6
ENSPTIP00000022007	zf-C2H2	PF00096.26	1.1e-32	6	6
ENSPTIP00000022007	zf-met	PF12874.7	0.00026	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000026407	GTF3A-201	1098	XM_015540299	ENSPTIP00000022007	365 (aa)	XP_015395785	-

Gene Model

Click here to download ENSPTIG00000018958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000018958's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000018958	GTF3A	65	39.669	ENSPTIG00000014852	ZNF234	77	39.669
ENSPTIG00000018958	GTF3A	65	33.607	ENSPTIG00000009310	-	76	33.607
ENSPTIG00000018958	GTF3A	67	34.615	ENSPTIG00000007474	WT1	51	34.586
ENSPTIG00000018958	GTF3A	68	36.471	ENSPTIG00000017831	ZNF226	73	36.471
ENSPTIG00000018958	GTF3A	65	37.736	ENSPTIG00000012277	-	89	32.231
ENSPTIG00000018958	GTF3A	65	35.897	ENSPTIG00000013306	-	82	35.897
ENSPTIG00000018958	GTF3A	71	54.545	ENSPTIG00000010773	ZNF367	57	54.545
ENSPTIG00000018958	GTF3A	65	35.537	ENSPTIG00000009259	-	78	37.190
ENSPTIG00000018958	GTF3A	65	34.483	ENSPTIG00000016395	-	65	34.483
ENSPTIG00000018958	GTF3A	65	41.860	ENSPTIG00000016461	ZNF317	71	33.471
ENSPTIG00000018958	GTF3A	66	36.090	ENSPTIG00000011566	ZNF236	57	36.090
ENSPTIG00000018958	GTF3A	65	37.190	ENSPTIG00000009517	-	97	37.190
ENSPTIG00000018958	GTF3A	65	39.669	ENSPTIG00000010807	PRDM5	72	31.599
ENSPTIG00000018958	GTF3A	65	34.426	ENSPTIG00000009843	ZFP1	56	34.426
ENSPTIG00000018958	GTF3A	72	39.669	ENSPTIG00000021573	ZNF235	65	39.669
ENSPTIG00000018958	GTF3A	65	36.555	ENSPTIG00000017612	ZNF81	63	36.555
ENSPTIG00000018958	GTF3A	65	30.738	ENSPTIG00000009499	-	92	30.738

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000018958	GTF3A	82	89.933	ENSAMEG00000015824	GTF3A	91	89.933	Ailuropoda_melanoleuca
ENSPTIG00000018958	GTF3A	80	83.505	ENSBTAG00000012600	GTF3A	89	83.505	Bos_taurus
ENSPTIG00000018958	GTF3A	79	87.889	ENSCAFG00000006794	GTF3A	87	87.889	Canis_familiaris
ENSPTIG00000018958	GTF3A	80	81.443	ENSCHIG00000010341	-	89	81.443	Capra_hircus
ENSPTIG00000018958	GTF3A	80	82.131	ENSCHIG00000021040	-	76	82.131	Capra_hircus
ENSPTIG00000018958	GTF3A	82	80.936	ENSTSYG00000004206	GTF3A	98	80.936	Carlito_syrichta
ENSPTIG00000018958	GTF3A	79	80.345	ENSCAPG00000015862	GTF3A	98	82.625	Cavia_aperea
ENSPTIG00000018958	GTF3A	72	83.650	ENSCPOG00000010143	GTF3A	88	83.650	Cavia_porcellus
ENSPTIG00000018958	GTF3A	67	87.295	ENSCLAG00000003912	GTF3A	84	87.295	Chinchilla_lanigera
ENSPTIG00000018958	GTF3A	81	82.492	ENSDNOG00000037405	-	77	82.492	Dasypus_novemcinctus
ENSPTIG00000018958	GTF3A	64	76.923	ENSETEG00000003225	GTF3A	62	76.923	Echinops_telfairi
ENSPTIG00000018958	GTF3A	72	79.468	ENSEASG00005013216	-	81	79.468	Equus_asinus_asinus
ENSPTIG00000018958	GTF3A	82	86.913	ENSEASG00005022495	-	74	86.913	Equus_asinus_asinus
ENSPTIG00000018958	GTF3A	82	87.584	ENSECAG00000014803	GTF3A	86	87.584	Equus_caballus
ENSPTIG00000018958	GTF3A	82	82.550	ENSECAG00000024825	-	76	82.550	Equus_caballus
ENSPTIG00000018958	GTF3A	82	82.550	ENSEEUG00000004307	GTF3A	73	83.893	Erinaceus_europaeus
ENSPTIG00000018958	GTF3A	82	98.993	ENSFCAG00000006982	GTF3A	76	98.993	Felis_catus
ENSPTIG00000018958	GTF3A	67	86.885	ENSFDAG00000016841	GTF3A	85	86.885	Fukomys_damarensis
ENSPTIG00000018958	GTF3A	67	87.347	ENSHGLG00000004173	GTF3A	85	87.347	Heterocephalus_glaber_female
ENSPTIG00000018958	GTF3A	67	87.347	ENSHGLG00100011561	GTF3A	85	87.347	Heterocephalus_glaber_male
ENSPTIG00000018958	GTF3A	67	86.531	ENSSTOG00000013853	GTF3A	88	86.531	Ictidomys_tridecemlineatus
ENSPTIG00000018958	GTF3A	82	77.258	ENSJJAG00000011501	Gtf3a	96	77.258	Jaculus_jaculus
ENSPTIG00000018958	GTF3A	82	77.888	ENSLAFG00000027315	GTF3A	90	77.888	Loxodonta_africana
ENSPTIG00000018958	GTF3A	81	77.627	ENSMAUG00000016253	Gtf3a	88	77.027	Mesocricetus_auratus
ENSPTIG00000018958	GTF3A	82	82.609	ENSMICG00000014763	GTF3A	95	82.609	Microcebus_murinus
ENSPTIG00000018958	GTF3A	81	77.778	MGP_CAROLIEiJ_G0028031	Gtf3a	90	78.188	Mus_caroli
ENSPTIG00000018958	GTF3A	76	82.609	ENSMUSG00000016503	Gtf3a	90	78.523	Mus_musculus
ENSPTIG00000018958	GTF3A	81	79.599	MGP_PahariEiJ_G0024597	Gtf3a	90	79.933	Mus_pahari
ENSPTIG00000018958	GTF3A	81	78.188	MGP_SPRETEiJ_G0029029	Gtf3a	90	78.188	Mus_spretus
ENSPTIG00000018958	GTF3A	82	87.919	ENSMPUG00000005835	GTF3A	89	87.919	Mustela_putorius_furo
ENSPTIG00000018958	GTF3A	73	88.806	ENSMLUG00000002158	GTF3A	90	88.806	Myotis_lucifugus
ENSPTIG00000018958	GTF3A	82	84.899	ENSNLEG00000000331	GTF3A	96	86.087	Nomascus_leucogenys
ENSPTIG00000018958	GTF3A	81	55.077	ENSMEUG00000010089	GTF3A	95	55.077	Notamacropus_eugenii
ENSPTIG00000018958	GTF3A	80	68.731	ENSOPRG00000000854	-	80	68.731	Ochotona_princeps
ENSPTIG00000018958	GTF3A	82	81.879	ENSODEG00000006725	GTF3A	77	81.879	Octodon_degus
ENSPTIG00000018958	GTF3A	81	84.797	ENSOCUG00000011713	GTF3A	75	84.797	Oryctolagus_cuniculus
ENSPTIG00000018958	GTF3A	82	85.619	ENSOGAG00000014589	GTF3A	82	85.619	Otolemur_garnettii
ENSPTIG00000018958	GTF3A	80	76.632	ENSOARG00000012551	GTF3A	88	76.632	Ovis_aries
ENSPTIG00000018958	GTF3A	82	99.664	ENSPPRG00000002368	GTF3A	90	99.664	Panthera_pardus
ENSPTIG00000018958	GTF3A	81	55.725	ENSPSIG00000011722	GTF3A	99	55.725	Pelodiscus_sinensis
ENSPTIG00000018958	GTF3A	81	85.185	ENSPPYG00000005235	GTF3A	91	85.185	Pongo_abelii
ENSPTIG00000018958	GTF3A	82	81.333	ENSPCOG00000016742	GTF3A	74	81.333	Propithecus_coquereli
ENSPTIG00000018958	GTF3A	82	80.537	ENSPVAG00000012837	GTF3A	78	80.537	Pteropus_vampyrus
ENSPTIG00000018958	GTF3A	82	78.188	ENSRROG00000043264	GTF3A	89	78.188	Rhinopithecus_roxellana
ENSPTIG00000018958	GTF3A	82	78.523	ENSSHAG00000016965	GTF3A	93	78.523	Sarcophilus_harrisii
ENSPTIG00000018958	GTF3A	67	68.978	ENSSARG00000010692	GTF3A	75	68.978	Sorex_araneus
ENSPTIG00000018958	GTF3A	82	70.903	ENSSPUG00000005307	GTF3A	88	70.903	Sphenodon_punctatus
ENSPTIG00000018958	GTF3A	65	46.639	ENSTRUG00000005241	gtf3ab	89	46.360	Takifugu_rubripes
ENSPTIG00000018958	GTF3A	70	86.719	ENSTBEG00000012075	GTF3A	61	86.719	Tupaia_belangeri
ENSPTIG00000018958	GTF3A	81	76.689	ENSTTRG00000008538	GTF3A	79	76.689	Tursiops_truncatus
ENSPTIG00000018958	GTF3A	82	89.933	ENSUAMG00000019189	GTF3A	91	89.933	Ursus_americanus
ENSPTIG00000018958	GTF3A	82	88.629	ENSUMAG00000016941	GTF3A	98	88.629	Ursus_maritimus
ENSPTIG00000018958	GTF3A	81	85.811	ENSVPAG00000004995	GTF3A	99	85.811	Vicugna_pacos
ENSPTIG00000018958	GTF3A	82	88.294	ENSVVUG00000009197	GTF3A	90	88.294	Vulpes_vulpes