EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000019031 (Gene tree)
Gene ID: 102950838
Gene Symbol: RCL1
Alias: -
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 58240 bases
Position: chrKE722104.1:1698307-1756546
Accession: 102950838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000022138	RTC	PF01137.21	1.4e-42	1	1
ENSPTIP00000022118	RTC	PF01137.21	1.1e-11	1	1
ENSPTIP00000022118	RTC_insert	PF05189.13	3.2e-38	1	1
ENSPTIP00000022138	RTC_insert	PF05189.13	1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000026542	RCL1-202	1116	XM_007094158	ENSPTIP00000022138	371 (aa)	XP_007094220	-
ENSPTIT00000026522	RCL1-201	1742	-	ENSPTIP00000022118	215 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000019031's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000019031's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000019031	RCL1	100	94.884	ENSG00000120158	RCL1	100	94.884	Homo_sapiens
ENSPTIG00000019031	RCL1	100	81.481	ENSAPOG00000015666	rcl1	88	80.428	Acanthochromis_polyacanthus
ENSPTIG00000019031	RCL1	97	96.154	ENSAMEG00000002631	RCL1	87	97.239	Ailuropoda_melanoleuca
ENSPTIG00000019031	RCL1	100	81.019	ENSACIG00000021195	rcl1	88	79.205	Amphilophus_citrinellus
ENSPTIG00000019031	RCL1	100	80.093	ENSAOCG00000002223	rcl1	88	79.205	Amphiprion_ocellaris
ENSPTIG00000019031	RCL1	100	80.093	ENSAPEG00000006905	rcl1	88	79.511	Amphiprion_percula
ENSPTIG00000019031	RCL1	100	77.315	ENSATEG00000020026	rcl1	88	77.064	Anabas_testudineus
ENSPTIG00000019031	RCL1	100	85.116	ENSAPLG00000006031	RCL1	99	86.196	Anas_platyrhynchos
ENSPTIG00000019031	RCL1	100	85.116	ENSACAG00000003640	RCL1	87	85.583	Anolis_carolinensis
ENSPTIG00000019031	RCL1	97	94.712	ENSANAG00000037372	RCL1	87	95.092	Aotus_nancymaae
ENSPTIG00000019031	RCL1	100	81.944	ENSACLG00000021724	rcl1	88	79.511	Astatotilapia_calliptera
ENSPTIG00000019031	RCL1	100	80.093	ENSAMXG00000033394	rcl1	88	79.205	Astyanax_mexicanus
ENSPTIG00000019031	RCL1	99	46.847	WBGene00022852	ZK1127.5	88	45.946	Caenorhabditis_elegans
ENSPTIG00000019031	RCL1	97	94.231	ENSCJAG00000011202	RCL1	87	95.399	Callithrix_jacchus
ENSPTIG00000019031	RCL1	97	95.673	ENSCAFG00000002091	RCL1	87	96.626	Canis_familiaris
ENSPTIG00000019031	RCL1	97	95.673	ENSCAFG00020000638	RCL1	68	96.626	Canis_lupus_dingo
ENSPTIG00000019031	RCL1	97	92.308	ENSCHIG00000012407	RCL1	87	94.172	Capra_hircus
ENSPTIG00000019031	RCL1	97	95.192	ENSTSYG00000009592	RCL1	97	95.028	Carlito_syrichta
ENSPTIG00000019031	RCL1	68	80.233	ENSCAPG00000013575	RCL1	99	80.233	Cavia_aperea
ENSPTIG00000019031	RCL1	97	93.750	ENSCPOG00000015354	RCL1	87	94.479	Cavia_porcellus
ENSPTIG00000019031	RCL1	97	94.231	ENSCCAG00000033505	RCL1	97	93.956	Cebus_capucinus
ENSPTIG00000019031	RCL1	97	94.231	ENSCATG00000034721	RCL1	97	94.475	Cercocebus_atys
ENSPTIG00000019031	RCL1	97	94.231	ENSCLAG00000007445	RCL1	87	94.479	Chinchilla_lanigera
ENSPTIG00000019031	RCL1	97	94.712	ENSCSAG00000008811	RCL1	87	95.706	Chlorocebus_sabaeus
ENSPTIG00000019031	RCL1	73	93.038	ENSCHOG00000007216	RCL1	86	86.594	Choloepus_hoffmanni
ENSPTIG00000019031	RCL1	100	88.372	ENSCPBG00000025481	RCL1	93	89.264	Chrysemys_picta_bellii
ENSPTIG00000019031	RCL1	99	58.986	ENSCING00000019565	-	88	57.576	Ciona_intestinalis
ENSPTIG00000019031	RCL1	96	30.332	ENSCSAVG00000007269	-	55	30.332	Ciona_savignyi
ENSPTIG00000019031	RCL1	97	94.712	ENSCANG00000027099	RCL1	87	95.706	Colobus_angolensis_palliatus
ENSPTIG00000019031	RCL1	97	94.712	ENSCGRG00001013748	Rcl1	87	95.092	Cricetulus_griseus_chok1gshd
ENSPTIG00000019031	RCL1	97	94.712	ENSCGRG00000005843	Rcl1	99	95.092	Cricetulus_griseus_crigri
ENSPTIG00000019031	RCL1	100	79.630	ENSCSEG00000000712	rcl1	86	79.205	Cynoglossus_semilaevis
ENSPTIG00000019031	RCL1	100	81.481	ENSCVAG00000011536	rcl1	88	81.040	Cyprinodon_variegatus
ENSPTIG00000019031	RCL1	100	79.167	ENSDARG00000038312	rcl1	89	76.758	Danio_rerio
ENSPTIG00000019031	RCL1	100	93.488	ENSDNOG00000019911	RCL1	100	94.340	Dasypus_novemcinctus
ENSPTIG00000019031	RCL1	97	94.231	ENSDORG00000015645	Rcl1	87	95.092	Dipodomys_ordii
ENSPTIG00000019031	RCL1	99	49.772	FBgn0020909	Rtc1	86	53.030	Drosophila_melanogaster
ENSPTIG00000019031	RCL1	72	100.000	ENSETEG00000014087	-	82	100.000	Echinops_telfairi
ENSPTIG00000019031	RCL1	99	54.419	ENSEBUG00000016621	-	87	56.098	Eptatretus_burgeri
ENSPTIG00000019031	RCL1	97	93.750	ENSEASG00005010653	RCL1	87	95.399	Equus_asinus_asinus
ENSPTIG00000019031	RCL1	97	93.750	ENSECAG00000015973	RCL1	87	95.399	Equus_caballus
ENSPTIG00000019031	RCL1	97	80.769	ENSEEUG00000009801	RCL1	80	86.469	Erinaceus_europaeus
ENSPTIG00000019031	RCL1	100	77.315	ENSELUG00000007353	rcl1	88	75.841	Esox_lucius
ENSPTIG00000019031	RCL1	100	100.000	ENSFCAG00000014557	RCL1	87	100.000	Felis_catus
ENSPTIG00000019031	RCL1	100	83.721	ENSFALG00000010553	RCL1	87	85.583	Ficedula_albicollis
ENSPTIG00000019031	RCL1	97	93.750	ENSFDAG00000004209	RCL1	99	93.865	Fukomys_damarensis
ENSPTIG00000019031	RCL1	100	81.481	ENSFHEG00000011228	rcl1	90	80.734	Fundulus_heteroclitus
ENSPTIG00000019031	RCL1	100	80.556	ENSGMOG00000004677	rcl1	88	78.899	Gadus_morhua
ENSPTIG00000019031	RCL1	100	84.186	ENSGALG00000015024	RCL1	87	85.890	Gallus_gallus
ENSPTIG00000019031	RCL1	100	80.093	ENSGAFG00000007257	rcl1	88	78.899	Gambusia_affinis
ENSPTIG00000019031	RCL1	100	80.093	ENSGACG00000017474	rcl1	88	79.511	Gasterosteus_aculeatus
ENSPTIG00000019031	RCL1	100	88.837	ENSGAGG00000003689	RCL1	87	89.571	Gopherus_agassizii
ENSPTIG00000019031	RCL1	97	94.712	ENSGGOG00000015041	RCL1	97	94.475	Gorilla_gorilla
ENSPTIG00000019031	RCL1	100	82.407	ENSHBUG00000001393	rcl1	88	79.817	Haplochromis_burtoni
ENSPTIG00000019031	RCL1	100	80.465	ENSHGLG00000005368	-	86	77.301	Heterocephalus_glaber_female
ENSPTIG00000019031	RCL1	97	94.231	ENSHGLG00000016452	RCL1	87	94.785	Heterocephalus_glaber_female
ENSPTIG00000019031	RCL1	100	79.070	ENSHGLG00100018010	-	87	77.914	Heterocephalus_glaber_male
ENSPTIG00000019031	RCL1	97	94.231	ENSHGLG00100008718	-	94	94.785	Heterocephalus_glaber_male
ENSPTIG00000019031	RCL1	100	80.093	ENSHCOG00000020170	rcl1	88	78.287	Hippocampus_comes
ENSPTIG00000019031	RCL1	100	80.093	ENSIPUG00000018054	RCL1	88	78.899	Ictalurus_punctatus
ENSPTIG00000019031	RCL1	97	93.269	ENSSTOG00000000023	RCL1	87	94.172	Ictidomys_tridecemlineatus
ENSPTIG00000019031	RCL1	97	94.231	ENSJJAG00000022803	-	87	94.479	Jaculus_jaculus
ENSPTIG00000019031	RCL1	97	82.692	ENSJJAG00000015632	-	85	85.804	Jaculus_jaculus
ENSPTIG00000019031	RCL1	93	71.144	ENSJJAG00000000764	-	98	71.144	Jaculus_jaculus
ENSPTIG00000019031	RCL1	100	79.630	ENSKMAG00000011946	rcl1	88	78.899	Kryptolebias_marmoratus
ENSPTIG00000019031	RCL1	100	82.407	ENSLBEG00000003957	rcl1	92	80.122	Labrus_bergylta
ENSPTIG00000019031	RCL1	84	78.453	ENSLACG00000004594	RCL1	86	84.477	Latimeria_chalumnae
ENSPTIG00000019031	RCL1	100	84.651	ENSLOCG00000010148	rcl1	86	82.822	Lepisosteus_oculatus
ENSPTIG00000019031	RCL1	97	91.827	ENSLAFG00000017495	RCL1	87	93.252	Loxodonta_africana
ENSPTIG00000019031	RCL1	97	94.712	ENSMFAG00000037906	RCL1	87	95.706	Macaca_fascicularis
ENSPTIG00000019031	RCL1	97	94.712	ENSMNEG00000012288	RCL1	97	94.475	Macaca_nemestrina
ENSPTIG00000019031	RCL1	97	94.712	ENSMLEG00000043088	RCL1	87	95.706	Mandrillus_leucophaeus
ENSPTIG00000019031	RCL1	100	80.556	ENSMAMG00000008311	rcl1	88	79.511	Mastacembelus_armatus
ENSPTIG00000019031	RCL1	100	81.944	ENSMZEG00005017292	rcl1	88	79.511	Maylandia_zebra
ENSPTIG00000019031	RCL1	100	83.562	ENSMGAG00000002245	RCL1	100	83.562	Meleagris_gallopavo
ENSPTIG00000019031	RCL1	100	95.349	ENSMAUG00000008922	Rcl1	100	95.349	Mesocricetus_auratus
ENSPTIG00000019031	RCL1	97	93.269	ENSMICG00000015562	RCL1	87	94.785	Microcebus_murinus
ENSPTIG00000019031	RCL1	97	95.192	ENSMOCG00000012145	Rcl1	87	95.092	Microtus_ochrogaster
ENSPTIG00000019031	RCL1	97	76.555	ENSMMOG00000021264	rcl1	88	76.220	Mola_mola
ENSPTIG00000019031	RCL1	88	93.158	ENSMODG00000015377	RCL1	82	93.506	Monodelphis_domestica
ENSPTIG00000019031	RCL1	100	79.167	ENSMALG00000018618	rcl1	88	77.982	Monopterus_albus
ENSPTIG00000019031	RCL1	97	94.712	MGP_CAROLIEiJ_G0022853	Rcl1	87	95.399	Mus_caroli
ENSPTIG00000019031	RCL1	97	95.192	ENSMUSG00000024785	Rcl1	87	95.399	Mus_musculus
ENSPTIG00000019031	RCL1	97	95.673	MGP_PahariEiJ_G0014346	Rcl1	100	95.882	Mus_pahari
ENSPTIG00000019031	RCL1	97	94.712	MGP_SPRETEiJ_G0023771	Rcl1	100	95.294	Mus_spretus
ENSPTIG00000019031	RCL1	97	94.712	ENSMPUG00000004998	RCL1	87	96.319	Mustela_putorius_furo
ENSPTIG00000019031	RCL1	97	93.269	ENSMLUG00000009654	RCL1	87	94.479	Myotis_lucifugus
ENSPTIG00000019031	RCL1	97	94.231	ENSNGAG00000015327	Rcl1	87	94.479	Nannospalax_galili
ENSPTIG00000019031	RCL1	100	81.944	ENSNBRG00000019854	rcl1	90	78.593	Neolamprologus_brichardi
ENSPTIG00000019031	RCL1	97	89.423	ENSNLEG00000008891	RCL1	87	92.025	Nomascus_leucogenys
ENSPTIG00000019031	RCL1	97	92.788	ENSMEUG00000007653	RCL1	81	93.399	Notamacropus_eugenii
ENSPTIG00000019031	RCL1	97	94.712	ENSOPRG00000010965	RCL1	87	95.092	Ochotona_princeps
ENSPTIG00000019031	RCL1	99	81.651	ENSODEG00000004151	RCL1	95	79.141	Octodon_degus
ENSPTIG00000019031	RCL1	100	81.944	ENSONIG00000003871	rcl1	88	79.205	Oreochromis_niloticus
ENSPTIG00000019031	RCL1	97	86.730	ENSOANG00000013193	-	100	86.166	Ornithorhynchus_anatinus
ENSPTIG00000019031	RCL1	97	95.673	ENSOCUG00000008161	RCL1	87	95.706	Oryctolagus_cuniculus
ENSPTIG00000019031	RCL1	100	77.778	ENSORLG00000010443	rcl1	88	77.064	Oryzias_latipes
ENSPTIG00000019031	RCL1	100	77.778	ENSORLG00020012211	rcl1	88	77.064	Oryzias_latipes_hni
ENSPTIG00000019031	RCL1	100	77.778	ENSORLG00015001122	rcl1	88	76.758	Oryzias_latipes_hsok
ENSPTIG00000019031	RCL1	100	80.093	ENSOMEG00000022976	rcl1	77	78.593	Oryzias_melastigma
ENSPTIG00000019031	RCL1	97	93.750	ENSOGAG00000007480	RCL1	87	94.172	Otolemur_garnettii
ENSPTIG00000019031	RCL1	97	92.788	ENSOARG00000013463	RCL1	87	94.479	Ovis_aries
ENSPTIG00000019031	RCL1	97	94.712	ENSPPAG00000037958	RCL1	87	95.706	Pan_paniscus
ENSPTIG00000019031	RCL1	100	99.535	ENSPPRG00000022645	RCL1	96	99.438	Panthera_pardus
ENSPTIG00000019031	RCL1	97	94.712	ENSPTRG00000020743	RCL1	97	94.475	Pan_troglodytes
ENSPTIG00000019031	RCL1	97	94.712	ENSPANG00000025151	RCL1	87	95.706	Papio_anubis
ENSPTIG00000019031	RCL1	100	81.481	ENSPKIG00000021022	rcl1	88	79.205	Paramormyrops_kingsleyae
ENSPTIG00000019031	RCL1	100	88.372	ENSPSIG00000012302	RCL1	99	89.264	Pelodiscus_sinensis
ENSPTIG00000019031	RCL1	100	79.167	ENSPMGG00000024007	rcl1	88	77.676	Periophthalmus_magnuspinnatus
ENSPTIG00000019031	RCL1	97	95.192	ENSPEMG00000023275	Rcl1	87	95.706	Peromyscus_maniculatus_bairdii
ENSPTIG00000019031	RCL1	97	30.660	ENSPMAG00000009110	rtca	80	31.818	Petromyzon_marinus
ENSPTIG00000019031	RCL1	83	67.598	ENSPMAG00000005419	-	95	67.598	Petromyzon_marinus
ENSPTIG00000019031	RCL1	97	93.269	ENSPCIG00000000188	RCL1	93	93.865	Phascolarctos_cinereus
ENSPTIG00000019031	RCL1	100	80.556	ENSPFOG00000019682	rcl1	87	79.511	Poecilia_formosa
ENSPTIG00000019031	RCL1	100	80.556	ENSPLAG00000022354	rcl1	88	79.511	Poecilia_latipinna
ENSPTIG00000019031	RCL1	100	80.556	ENSPMEG00000008131	rcl1	88	79.511	Poecilia_mexicana
ENSPTIG00000019031	RCL1	100	80.093	ENSPREG00000008032	rcl1	88	79.205	Poecilia_reticulata
ENSPTIG00000019031	RCL1	97	94.231	ENSPPYG00000019244	RCL1	87	95.399	Pongo_abelii
ENSPTIG00000019031	RCL1	97	81.250	ENSPCAG00000001440	RCL1	88	83.742	Procavia_capensis
ENSPTIG00000019031	RCL1	97	94.231	ENSPCOG00000009611	RCL1	97	93.923	Propithecus_coquereli
ENSPTIG00000019031	RCL1	97	95.192	ENSPVAG00000015752	RCL1	87	96.319	Pteropus_vampyrus
ENSPTIG00000019031	RCL1	100	81.944	ENSPNYG00000012910	rcl1	88	79.511	Pundamilia_nyererei
ENSPTIG00000019031	RCL1	100	81.944	ENSPNAG00000028307	rcl1	81	80.122	Pygocentrus_nattereri
ENSPTIG00000019031	RCL1	97	93.750	ENSRNOG00000015491	Rcl1	87	94.479	Rattus_norvegicus
ENSPTIG00000019031	RCL1	97	94.231	ENSRBIG00000035818	RCL1	87	95.399	Rhinopithecus_bieti
ENSPTIG00000019031	RCL1	97	94.712	ENSRROG00000029781	RCL1	97	94.475	Rhinopithecus_roxellana
ENSPTIG00000019031	RCL1	99	30.594	YOL010W	-	87	33.233	Saccharomyces_cerevisiae
ENSPTIG00000019031	RCL1	97	94.231	ENSSBOG00000026369	RCL1	97	94.505	Saimiri_boliviensis_boliviensis
ENSPTIG00000019031	RCL1	97	91.346	ENSSHAG00000014086	RCL1	99	92.025	Sarcophilus_harrisii
ENSPTIG00000019031	RCL1	100	81.019	ENSSFOG00015023020	rcl1	88	79.817	Scleropages_formosus
ENSPTIG00000019031	RCL1	100	79.630	ENSSMAG00000019751	rcl1	75	79.205	Scophthalmus_maximus
ENSPTIG00000019031	RCL1	100	79.630	ENSSDUG00000006349	rcl1	88	79.511	Seriola_dumerili
ENSPTIG00000019031	RCL1	100	80.556	ENSSLDG00000022076	rcl1	88	79.817	Seriola_lalandi_dorsalis
ENSPTIG00000019031	RCL1	97	93.269	ENSSARG00000009260	RCL1	88	94.785	Sorex_araneus
ENSPTIG00000019031	RCL1	96	30.189	ENSSARG00000013993	RTCA	64	30.189	Sorex_araneus
ENSPTIG00000019031	RCL1	100	88.372	ENSSPUG00000016330	RCL1	87	87.730	Sphenodon_punctatus
ENSPTIG00000019031	RCL1	100	81.481	ENSSPAG00000018038	rcl1	88	80.734	Stegastes_partitus
ENSPTIG00000019031	RCL1	97	94.712	ENSSSCG00000005217	RCL1	72	95.706	Sus_scrofa
ENSPTIG00000019031	RCL1	100	83.410	ENSTGUG00000005138	RCL1	87	85.366	Taeniopygia_guttata
ENSPTIG00000019031	RCL1	100	80.556	ENSTRUG00000010493	rcl1	88	79.511	Takifugu_rubripes
ENSPTIG00000019031	RCL1	100	80.093	ENSTNIG00000013214	rcl1	87	78.899	Tetraodon_nigroviridis
ENSPTIG00000019031	RCL1	100	93.023	ENSTBEG00000016339	RCL1	87	87.423	Tupaia_belangeri
ENSPTIG00000019031	RCL1	100	93.023	ENSTTRG00000016525	RCL1	87	94.785	Tursiops_truncatus
ENSPTIG00000019031	RCL1	97	96.154	ENSUAMG00000005598	RCL1	87	97.239	Ursus_americanus
ENSPTIG00000019031	RCL1	97	95.192	ENSUMAG00000017890	RCL1	97	96.626	Ursus_maritimus
ENSPTIG00000019031	RCL1	97	95.673	ENSVPAG00000009188	RCL1	99	96.626	Vicugna_pacos
ENSPTIG00000019031	RCL1	97	95.673	ENSVVUG00000007304	RCL1	88	96.626	Vulpes_vulpes
ENSPTIG00000019031	RCL1	100	74.537	ENSXETG00000000592	rcl1	87	76.453	Xenopus_tropicalis
ENSPTIG00000019031	RCL1	100	80.556	ENSXCOG00000004922	rcl1	88	79.511	Xiphophorus_couchianus
ENSPTIG00000019031	RCL1	100	80.556	ENSXMAG00000022366	RCL1	88	79.511	Xiphophorus_maculatus