EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000019153 (Gene tree)
Gene ID: 102952138
Gene Symbol: SRSF6
Alias: -
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 4646 bases
Position: chrKE721700.1:5034598-5039243
Accession: 102952138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000022294	RRM_1	PF00076.22	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000026706	SRSF6-201	3919	XM_007077803	ENSPTIP00000022294	215 (aa)	XP_007077865	UPI00004A6804

Gene Model

Click here to download ENSPTIG00000019153's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03040	Spliceosome	KEGG
ptg05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000019153's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000019153	SRSF6	100	96.774	ENSG00000124193	SRSF6	63	96.774	Homo_sapiens
ENSPTIG00000019153	SRSF6	100	100.000	ENSAMEG00000003710	SRSF6	62	100.000	Ailuropoda_melanoleuca
ENSPTIG00000019153	SRSF6	91	94.898	ENSANAG00000024080	SRSF6	56	95.385	Aotus_nancymaae
ENSPTIG00000019153	SRSF6	100	98.611	ENSBTAG00000008527	SRSF6	63	98.611	Bos_taurus
ENSPTIG00000019153	SRSF6	64	97.826	ENSCJAG00000048403	SRSF6	51	97.826	Callithrix_jacchus
ENSPTIG00000019153	SRSF6	100	100.000	ENSCAFG00000009289	SRSF6	63	100.000	Canis_familiaris
ENSPTIG00000019153	SRSF6	100	100.000	ENSCAFG00020013559	SRSF6	63	100.000	Canis_lupus_dingo
ENSPTIG00000019153	SRSF6	100	99.537	ENSCHIG00000009148	-	63	99.537	Capra_hircus
ENSPTIG00000019153	SRSF6	100	99.537	ENSCHIG00000015890	-	63	99.537	Capra_hircus
ENSPTIG00000019153	SRSF6	100	97.685	ENSTSYG00000026476	SRSF6	73	97.685	Carlito_syrichta
ENSPTIG00000019153	SRSF6	91	95.408	ENSCCAG00000026018	-	56	95.897	Cebus_capucinus
ENSPTIG00000019153	SRSF6	100	96.759	ENSCATG00000030794	SRSF6	62	96.759	Cercocebus_atys
ENSPTIG00000019153	SRSF6	90	95.385	ENSCLAG00000010247	SRSF6	57	95.385	Chinchilla_lanigera
ENSPTIG00000019153	SRSF6	100	96.759	ENSCSAG00000014022	SRSF6	62	96.759	Chlorocebus_sabaeus
ENSPTIG00000019153	SRSF6	100	96.296	ENSCHOG00000000561	SRSF6	63	96.296	Choloepus_hoffmanni
ENSPTIG00000019153	SRSF6	100	97.222	ENSCANG00000042529	-	73	97.222	Colobus_angolensis_palliatus
ENSPTIG00000019153	SRSF6	100	96.759	ENSCANG00000037774	-	62	96.759	Colobus_angolensis_palliatus
ENSPTIG00000019153	SRSF6	100	94.419	ENSCGRG00001022339	Srsf6	62	94.419	Cricetulus_griseus_chok1gshd
ENSPTIG00000019153	SRSF6	100	94.419	ENSCGRG00000006618	Srsf6	100	94.419	Cricetulus_griseus_crigri
ENSPTIG00000019153	SRSF6	90	94.359	ENSDNOG00000008410	SRSF6	56	94.359	Dasypus_novemcinctus
ENSPTIG00000019153	SRSF6	91	96.429	ENSDORG00000028378	Srsf6	57	96.923	Dipodomys_ordii
ENSPTIG00000019153	SRSF6	88	95.288	ENSETEG00000006221	SRSF6	57	93.846	Echinops_telfairi
ENSPTIG00000019153	SRSF6	100	98.148	ENSEASG00005023429	SRSF6	63	98.148	Equus_asinus_asinus
ENSPTIG00000019153	SRSF6	100	98.148	ENSECAG00000023932	SRSF6	63	98.148	Equus_caballus
ENSPTIG00000019153	SRSF6	89	94.301	ENSEEUG00000002324	SRSF6	89	95.337	Erinaceus_europaeus
ENSPTIG00000019153	SRSF6	100	100.000	ENSFCAG00000032814	SRSF6	63	100.000	Felis_catus
ENSPTIG00000019153	SRSF6	90	94.872	ENSFDAG00000012191	SRSF6	67	94.872	Fukomys_damarensis
ENSPTIG00000019153	SRSF6	100	96.774	ENSGGOG00000009808	SRSF6	63	96.774	Gorilla_gorilla
ENSPTIG00000019153	SRSF6	90	95.385	ENSHGLG00000007348	SRSF6	57	95.385	Heterocephalus_glaber_female
ENSPTIG00000019153	SRSF6	90	95.385	ENSHGLG00100005043	SRSF6	67	95.385	Heterocephalus_glaber_male
ENSPTIG00000019153	SRSF6	91	95.408	ENSSTOG00000010866	SRSF6	56	95.897	Ictidomys_tridecemlineatus
ENSPTIG00000019153	SRSF6	91	95.918	ENSLAFG00000006682	SRSF6	76	96.410	Loxodonta_africana
ENSPTIG00000019153	SRSF6	100	96.759	ENSMFAG00000036925	SRSF6	62	96.759	Macaca_fascicularis
ENSPTIG00000019153	SRSF6	100	96.759	ENSMMUG00000006742	SRSF6	62	96.759	Macaca_mulatta
ENSPTIG00000019153	SRSF6	100	96.759	ENSMNEG00000027392	-	62	96.759	Macaca_nemestrina
ENSPTIG00000019153	SRSF6	89	95.337	ENSMNEG00000038270	-	56	95.385	Macaca_nemestrina
ENSPTIG00000019153	SRSF6	100	96.759	ENSMLEG00000031524	SRSF6	100	96.759	Mandrillus_leucophaeus
ENSPTIG00000019153	SRSF6	100	97.685	ENSMICG00000008537	SRSF6	63	97.685	Microcebus_murinus
ENSPTIG00000019153	SRSF6	100	94.419	ENSMOCG00000018738	Srsf6	100	94.419	Microtus_ochrogaster
ENSPTIG00000019153	SRSF6	90	94.845	MGP_CAROLIEiJ_G0024606	Srsf6	57	94.845	Mus_caroli
ENSPTIG00000019153	SRSF6	90	94.845	ENSMUSG00000016921	Srsf6	57	95.385	Mus_musculus
ENSPTIG00000019153	SRSF6	90	94.845	MGP_SPRETEiJ_G0025528	Srsf6	57	95.385	Mus_spretus
ENSPTIG00000019153	SRSF6	73	100.000	ENSMPUG00000017692	SRSF6	55	100.000	Mustela_putorius_furo
ENSPTIG00000019153	SRSF6	100	97.222	ENSMLUG00000016618	SRSF6	63	97.222	Myotis_lucifugus
ENSPTIG00000019153	SRSF6	90	93.333	ENSNGAG00000017560	Srsf6	56	92.308	Nannospalax_galili
ENSPTIG00000019153	SRSF6	100	96.774	ENSNLEG00000006524	SRSF6	63	96.774	Nomascus_leucogenys
ENSPTIG00000019153	SRSF6	100	96.759	ENSOPRG00000002017	-	83	96.759	Ochotona_princeps
ENSPTIG00000019153	SRSF6	74	99.375	ENSOCUG00000009785	-	53	99.375	Oryctolagus_cuniculus
ENSPTIG00000019153	SRSF6	91	96.410	ENSOGAG00000014468	SRSF6	56	96.907	Otolemur_garnettii
ENSPTIG00000019153	SRSF6	100	99.074	ENSOARG00000003117	SRSF6	63	99.074	Ovis_aries
ENSPTIG00000019153	SRSF6	84	86.813	ENSPPAG00000043131	-	58	86.813	Pan_paniscus
ENSPTIG00000019153	SRSF6	100	96.774	ENSPPAG00000034327	-	63	96.774	Pan_paniscus
ENSPTIG00000019153	SRSF6	100	100.000	ENSPPRG00000008917	SRSF6	63	100.000	Panthera_pardus
ENSPTIG00000019153	SRSF6	100	96.313	ENSPTRG00000044686	-	63	96.313	Pan_troglodytes
ENSPTIG00000019153	SRSF6	84	86.813	ENSPTRG00000046274	-	58	86.813	Pan_troglodytes
ENSPTIG00000019153	SRSF6	100	96.759	ENSPANG00000035224	SRSF6	62	96.759	Papio_anubis
ENSPTIG00000019153	SRSF6	100	96.774	ENSPPYG00000011019	SRSF6	63	96.774	Pongo_abelii
ENSPTIG00000019153	SRSF6	100	98.148	ENSPCOG00000026364	SRSF6	63	98.148	Propithecus_coquereli
ENSPTIG00000019153	SRSF6	90	94.872	ENSPVAG00000015232	SRSF6	56	94.872	Pteropus_vampyrus
ENSPTIG00000019153	SRSF6	90	94.845	ENSRNOG00000006380	Srsf6	57	95.385	Rattus_norvegicus
ENSPTIG00000019153	SRSF6	100	96.296	ENSRBIG00000041414	SRSF6	63	96.296	Rhinopithecus_bieti
ENSPTIG00000019153	SRSF6	100	96.759	ENSRROG00000029989	SRSF6	62	96.759	Rhinopithecus_roxellana
ENSPTIG00000019153	SRSF6	91	94.898	ENSSBOG00000033708	-	56	95.385	Saimiri_boliviensis_boliviensis
ENSPTIG00000019153	SRSF6	100	97.674	ENSSARG00000001602	SRSF6	83	97.674	Sorex_araneus
ENSPTIG00000019153	SRSF6	100	98.148	ENSSSCG00000007362	SRSF6	63	98.148	Sus_scrofa
ENSPTIG00000019153	SRSF6	100	96.774	ENSTBEG00000013448	SRSF6	69	96.774	Tupaia_belangeri
ENSPTIG00000019153	SRSF6	100	98.148	ENSTTRG00000015410	SRSF6	83	98.148	Tursiops_truncatus
ENSPTIG00000019153	SRSF6	100	100.000	ENSUAMG00000003559	SRSF6	63	100.000	Ursus_americanus
ENSPTIG00000019153	SRSF6	100	100.000	ENSUMAG00000001154	SRSF6	100	100.000	Ursus_maritimus
ENSPTIG00000019153	SRSF6	100	99.074	ENSVPAG00000003016	SRSF6	63	99.074	Vicugna_pacos