EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000019200 (Gene tree)
Gene ID: 102972902
Gene Symbol: PRPF8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 31190 bases
Position: chrKE721670.1:6716867-6748056
Accession: 102972902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000022410	RRM_4	PF10598.9	3e-48	1	1
ENSPTIP00000022410	U5_2-snRNA_bdg	PF10597.9	5.9e-74	1	1
ENSPTIP00000022410	PRO8NT	PF08082.11	1.2e-86	1	1
ENSPTIP00000022410	U6-snRNA_bdg	PF10596.9	1.4e-89	1	1
ENSPTIP00000022410	PROCN	PF08083.11	1.6e-235	1	1
ENSPTIP00000022410	PRP8_domainIV	PF12134.8	3.1e-130	1	1
ENSPTIP00000022410	PROCT	PF08084.11	1.2e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000026831	PRPF8-201	7002	XM_007076115	ENSPTIP00000022410	2333 (aa)	XP_007076177	-

Gene Model

Click here to download ENSPTIG00000019200's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000019200's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000019200	PRPF8	100	99.914	ENSG00000174231	PRPF8	100	99.914	Homo_sapiens
ENSPTIG00000019200	PRPF8	100	97.734	ENSAPOG00000010079	prpf8	100	97.734	Acanthochromis_polyacanthus
ENSPTIG00000019200	PRPF8	100	99.914	ENSAMEG00000007940	PRPF8	100	99.914	Ailuropoda_melanoleuca
ENSPTIG00000019200	PRPF8	100	95.464	ENSACIG00000018280	prpf8	100	95.840	Amphilophus_citrinellus
ENSPTIG00000019200	PRPF8	100	97.734	ENSAOCG00000010725	prpf8	100	97.734	Amphiprion_ocellaris
ENSPTIG00000019200	PRPF8	100	97.734	ENSAPEG00000014397	prpf8	100	97.734	Amphiprion_percula
ENSPTIG00000019200	PRPF8	100	97.177	ENSATEG00000010062	prpf8	100	97.177	Anabas_testudineus
ENSPTIG00000019200	PRPF8	96	99.466	ENSAPLG00000010357	PRPF8	100	99.466	Anas_platyrhynchos
ENSPTIG00000019200	PRPF8	83	97.374	ENSACAG00000014784	PRPF8	99	97.374	Anolis_carolinensis
ENSPTIG00000019200	PRPF8	100	99.914	ENSANAG00000032629	PRPF8	100	99.914	Aotus_nancymaae
ENSPTIG00000019200	PRPF8	100	97.362	ENSACLG00000020858	prpf8	100	97.362	Astatotilapia_calliptera
ENSPTIG00000019200	PRPF8	100	97.646	ENSAMXG00000020291	prpf8	100	97.646	Astyanax_mexicanus
ENSPTIG00000019200	PRPF8	100	99.914	ENSBTAG00000011488	PRPF8	100	99.914	Bos_taurus
ENSPTIG00000019200	PRPF8	99	86.358	WBGene00004187	prp-8	99	86.444	Caenorhabditis_elegans
ENSPTIG00000019200	PRPF8	100	99.914	ENSCJAG00000001911	PRPF8	100	99.914	Callithrix_jacchus
ENSPTIG00000019200	PRPF8	100	99.914	ENSCAFG00000019221	PRPF8	100	99.914	Canis_familiaris
ENSPTIG00000019200	PRPF8	96	99.911	ENSCAFG00020009943	PRPF8	100	99.911	Canis_lupus_dingo
ENSPTIG00000019200	PRPF8	100	99.914	ENSCHIG00000017499	PRPF8	100	99.914	Capra_hircus
ENSPTIG00000019200	PRPF8	100	99.914	ENSTSYG00000014120	PRPF8	100	99.914	Carlito_syrichta
ENSPTIG00000019200	PRPF8	96	97.684	ENSCAPG00000009459	PRPF8	99	97.684	Cavia_aperea
ENSPTIG00000019200	PRPF8	100	99.914	ENSCPOG00000010379	PRPF8	100	99.914	Cavia_porcellus
ENSPTIG00000019200	PRPF8	100	99.914	ENSCCAG00000031983	-	100	99.914	Cebus_capucinus
ENSPTIG00000019200	PRPF8	100	99.914	ENSCATG00000038595	PRPF8	100	99.914	Cercocebus_atys
ENSPTIG00000019200	PRPF8	100	99.914	ENSCLAG00000004388	PRPF8	100	99.914	Chinchilla_lanigera
ENSPTIG00000019200	PRPF8	100	99.914	ENSCSAG00000013929	PRPF8	100	99.914	Chlorocebus_sabaeus
ENSPTIG00000019200	PRPF8	81	99.738	ENSCHOG00000008590	PRPF8	88	99.738	Choloepus_hoffmanni
ENSPTIG00000019200	PRPF8	100	99.443	ENSCPBG00000020409	PRPF8	100	99.443	Chrysemys_picta_bellii
ENSPTIG00000019200	PRPF8	98	92.637	ENSCSAVG00000007825	-	100	91.194	Ciona_savignyi
ENSPTIG00000019200	PRPF8	100	99.914	ENSCANG00000043088	PRPF8	100	99.914	Colobus_angolensis_palliatus
ENSPTIG00000019200	PRPF8	74	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSPTIG00000019200	PRPF8	100	97.563	ENSCSEG00000007905	prpf8	100	97.563	Cynoglossus_semilaevis
ENSPTIG00000019200	PRPF8	100	97.523	ENSDARG00000026180	prpf8	100	97.523	Danio_rerio
ENSPTIG00000019200	PRPF8	93	99.862	ENSDNOG00000018471	PRPF8	99	99.862	Dasypus_novemcinctus
ENSPTIG00000019200	PRPF8	84	99.290	ENSDORG00000006185	Prpf8	96	99.290	Dipodomys_ordii
ENSPTIG00000019200	PRPF8	99	91.463	FBgn0033688	Prp8	98	91.037	Drosophila_melanogaster
ENSPTIG00000019200	PRPF8	100	94.433	ENSETEG00000017592	PRPF8	100	94.433	Echinops_telfairi
ENSPTIG00000019200	PRPF8	99	93.643	ENSEBUG00000006548	prpf8	99	93.643	Eptatretus_burgeri
ENSPTIG00000019200	PRPF8	100	99.914	ENSEASG00005009514	PRPF8	100	99.914	Equus_asinus_asinus
ENSPTIG00000019200	PRPF8	97	99.912	ENSECAG00000021318	PRPF8	100	99.912	Equus_caballus
ENSPTIG00000019200	PRPF8	67	100.000	ENSEEUG00000012120	-	67	100.000	Erinaceus_europaeus
ENSPTIG00000019200	PRPF8	98	96.460	ENSELUG00000007120	prpf8	99	96.460	Esox_lucius
ENSPTIG00000019200	PRPF8	100	99.914	ENSFCAG00000006297	PRPF8	100	99.914	Felis_catus
ENSPTIG00000019200	PRPF8	100	99.400	ENSFALG00000006628	PRPF8	100	99.400	Ficedula_albicollis
ENSPTIG00000019200	PRPF8	100	99.914	ENSFDAG00000004711	PRPF8	100	99.914	Fukomys_damarensis
ENSPTIG00000019200	PRPF8	100	97.353	ENSFHEG00000021084	prpf8	100	97.353	Fundulus_heteroclitus
ENSPTIG00000019200	PRPF8	100	95.305	ENSGMOG00000002028	prpf8	99	95.305	Gadus_morhua
ENSPTIG00000019200	PRPF8	100	99.358	ENSGALG00000002943	PRPF8	100	99.358	Gallus_gallus
ENSPTIG00000019200	PRPF8	99	97.435	ENSGAFG00000010337	prpf8	99	97.435	Gambusia_affinis
ENSPTIG00000019200	PRPF8	100	97.430	ENSGACG00000008504	prpf8	100	97.430	Gasterosteus_aculeatus
ENSPTIG00000019200	PRPF8	100	99.443	ENSGAGG00000008350	PRPF8	100	99.443	Gopherus_agassizii
ENSPTIG00000019200	PRPF8	100	99.914	ENSGGOG00000005516	PRPF8	100	99.914	Gorilla_gorilla
ENSPTIG00000019200	PRPF8	100	97.518	ENSHBUG00000016192	prpf8	100	97.518	Haplochromis_burtoni
ENSPTIG00000019200	PRPF8	100	99.914	ENSHGLG00000012029	PRPF8	100	99.914	Heterocephalus_glaber_female
ENSPTIG00000019200	PRPF8	100	99.914	ENSHGLG00100016494	PRPF8	100	99.914	Heterocephalus_glaber_male
ENSPTIG00000019200	PRPF8	100	97.478	ENSHCOG00000016414	prpf8	100	97.478	Hippocampus_comes
ENSPTIG00000019200	PRPF8	100	97.519	ENSIPUG00000023230	prpf8	100	97.519	Ictalurus_punctatus
ENSPTIG00000019200	PRPF8	100	99.914	ENSSTOG00000005128	PRPF8	100	99.914	Ictidomys_tridecemlineatus
ENSPTIG00000019200	PRPF8	100	97.730	ENSJJAG00000021159	Prpf8	100	97.730	Jaculus_jaculus
ENSPTIG00000019200	PRPF8	99	97.891	ENSKMAG00000016118	prpf8	99	97.891	Kryptolebias_marmoratus
ENSPTIG00000019200	PRPF8	100	97.392	ENSLBEG00000026903	prpf8	100	97.392	Labrus_bergylta
ENSPTIG00000019200	PRPF8	95	95.982	ENSLACG00000010479	PRPF8	99	98.454	Latimeria_chalumnae
ENSPTIG00000019200	PRPF8	99	97.646	ENSLOCG00000005409	prpf8	99	97.646	Lepisosteus_oculatus
ENSPTIG00000019200	PRPF8	100	99.914	ENSLAFG00000015445	PRPF8	100	99.914	Loxodonta_africana
ENSPTIG00000019200	PRPF8	100	99.914	ENSMFAG00000039995	PRPF8	100	99.914	Macaca_fascicularis
ENSPTIG00000019200	PRPF8	100	99.914	ENSMMUG00000004820	PRPF8	100	99.914	Macaca_mulatta
ENSPTIG00000019200	PRPF8	100	99.914	ENSMNEG00000035713	PRPF8	100	99.914	Macaca_nemestrina
ENSPTIG00000019200	PRPF8	100	99.914	ENSMLEG00000037937	PRPF8	100	99.914	Mandrillus_leucophaeus
ENSPTIG00000019200	PRPF8	100	97.690	ENSMAMG00000008919	prpf8	100	97.690	Mastacembelus_armatus
ENSPTIG00000019200	PRPF8	100	97.362	ENSMZEG00005015073	prpf8	100	97.362	Maylandia_zebra
ENSPTIG00000019200	PRPF8	100	99.358	ENSMGAG00000004769	PRPF8	100	99.358	Meleagris_gallopavo
ENSPTIG00000019200	PRPF8	100	99.872	ENSMICG00000010320	PRPF8	100	99.872	Microcebus_murinus
ENSPTIG00000019200	PRPF8	100	99.872	ENSMOCG00000016838	Prpf8	100	99.872	Microtus_ochrogaster
ENSPTIG00000019200	PRPF8	100	97.220	ENSMMOG00000011887	prpf8	100	97.220	Mola_mola
ENSPTIG00000019200	PRPF8	100	99.743	ENSMODG00000010480	PRPF8	100	99.743	Monodelphis_domestica
ENSPTIG00000019200	PRPF8	97	97.713	ENSMALG00000003558	prpf8	100	97.713	Monopterus_albus
ENSPTIG00000019200	PRPF8	100	99.829	MGP_CAROLIEiJ_G0016740	Prpf8	100	99.829	Mus_caroli
ENSPTIG00000019200	PRPF8	100	99.829	ENSMUSG00000020850	Prpf8	100	99.829	Mus_musculus
ENSPTIG00000019200	PRPF8	100	99.743	MGP_PahariEiJ_G0017877	Prpf8	100	99.743	Mus_pahari
ENSPTIG00000019200	PRPF8	100	99.829	MGP_SPRETEiJ_G0017583	Prpf8	100	99.829	Mus_spretus
ENSPTIG00000019200	PRPF8	100	99.914	ENSMPUG00000013227	PRPF8	100	99.914	Mustela_putorius_furo
ENSPTIG00000019200	PRPF8	100	99.701	ENSMLUG00000002666	PRPF8	100	99.701	Myotis_lucifugus
ENSPTIG00000019200	PRPF8	100	98.116	ENSNGAG00000005305	Prpf8	100	98.116	Nannospalax_galili
ENSPTIG00000019200	PRPF8	100	97.404	ENSNBRG00000013127	prpf8	100	97.404	Neolamprologus_brichardi
ENSPTIG00000019200	PRPF8	97	97.570	ENSNLEG00000000897	PRPF8	98	97.570	Nomascus_leucogenys
ENSPTIG00000019200	PRPF8	99	97.957	ENSMEUG00000015999	PRPF8	100	97.957	Notamacropus_eugenii
ENSPTIG00000019200	PRPF8	100	98.373	ENSOPRG00000003102	PRPF8	100	98.373	Ochotona_princeps
ENSPTIG00000019200	PRPF8	100	99.914	ENSODEG00000008468	PRPF8	100	99.914	Octodon_degus
ENSPTIG00000019200	PRPF8	100	97.405	ENSONIG00000008153	prpf8	100	97.405	Oreochromis_niloticus
ENSPTIG00000019200	PRPF8	82	99.720	ENSOANG00000004250	PRPF8	97	99.720	Ornithorhynchus_anatinus
ENSPTIG00000019200	PRPF8	100	99.914	ENSOCUG00000000081	PRPF8	100	99.914	Oryctolagus_cuniculus
ENSPTIG00000019200	PRPF8	99	97.602	ENSORLG00000008036	prpf8	99	97.602	Oryzias_latipes
ENSPTIG00000019200	PRPF8	99	97.560	ENSORLG00020021070	prpf8	99	97.560	Oryzias_latipes_hni
ENSPTIG00000019200	PRPF8	99	97.602	ENSORLG00015002340	prpf8	99	97.602	Oryzias_latipes_hsok
ENSPTIG00000019200	PRPF8	99	96.101	ENSOMEG00000016866	prpf8	99	96.101	Oryzias_melastigma
ENSPTIG00000019200	PRPF8	100	99.786	ENSOARG00000013312	PRPF8	100	99.786	Ovis_aries
ENSPTIG00000019200	PRPF8	100	99.914	ENSPPAG00000042753	PRPF8	100	99.914	Pan_paniscus
ENSPTIG00000019200	PRPF8	100	99.914	ENSPPRG00000008746	PRPF8	100	99.914	Panthera_pardus
ENSPTIG00000019200	PRPF8	100	99.914	ENSPTRG00000039576	PRPF8	100	99.914	Pan_troglodytes
ENSPTIG00000019200	PRPF8	99	98.971	ENSPANG00000024607	PRPF8	99	98.971	Papio_anubis
ENSPTIG00000019200	PRPF8	100	97.234	ENSPKIG00000011201	prpf8	100	97.234	Paramormyrops_kingsleyae
ENSPTIG00000019200	PRPF8	100	99.400	ENSPSIG00000013393	PRPF8	100	99.400	Pelodiscus_sinensis
ENSPTIG00000019200	PRPF8	100	99.872	ENSPEMG00000021699	Prpf8	100	99.872	Peromyscus_maniculatus_bairdii
ENSPTIG00000019200	PRPF8	96	93.764	ENSPMAG00000005438	prpf8	100	93.808	Petromyzon_marinus
ENSPTIG00000019200	PRPF8	100	99.743	ENSPCIG00000022603	PRPF8	100	99.777	Phascolarctos_cinereus
ENSPTIG00000019200	PRPF8	100	96.905	ENSPFOG00000007005	prpf8	100	96.905	Poecilia_formosa
ENSPTIG00000019200	PRPF8	100	96.317	ENSPLAG00000020777	prpf8	100	96.317	Poecilia_latipinna
ENSPTIG00000019200	PRPF8	100	96.905	ENSPMEG00000004051	prpf8	100	96.905	Poecilia_mexicana
ENSPTIG00000019200	PRPF8	100	97.559	ENSPREG00000021902	prpf8	100	97.559	Poecilia_reticulata
ENSPTIG00000019200	PRPF8	100	99.914	ENSPPYG00000007777	PRPF8	100	99.914	Pongo_abelii
ENSPTIG00000019200	PRPF8	90	99.647	ENSPCAG00000008938	PRPF8	90	99.647	Procavia_capensis
ENSPTIG00000019200	PRPF8	100	99.872	ENSPCOG00000015182	PRPF8	100	99.872	Propithecus_coquereli
ENSPTIG00000019200	PRPF8	93	100.000	ENSPVAG00000002134	PRPF8	93	100.000	Pteropus_vampyrus
ENSPTIG00000019200	PRPF8	100	97.518	ENSPNYG00000016356	prpf8	100	97.518	Pundamilia_nyererei
ENSPTIG00000019200	PRPF8	100	97.562	ENSPNAG00000009247	prpf8	100	97.562	Pygocentrus_nattereri
ENSPTIG00000019200	PRPF8	100	99.829	ENSRNOG00000003495	Prpf8	100	99.829	Rattus_norvegicus
ENSPTIG00000019200	PRPF8	100	99.914	ENSRBIG00000031219	PRPF8	100	99.914	Rhinopithecus_bieti
ENSPTIG00000019200	PRPF8	100	99.914	ENSRROG00000038014	PRPF8	100	99.914	Rhinopithecus_roxellana
ENSPTIG00000019200	PRPF8	99	62.430	YHR165C	PRP8	95	62.473	Saccharomyces_cerevisiae
ENSPTIG00000019200	PRPF8	100	99.914	ENSSBOG00000029717	PRPF8	100	99.914	Saimiri_boliviensis_boliviensis
ENSPTIG00000019200	PRPF8	100	99.700	ENSSHAG00000006167	PRPF8	100	99.700	Sarcophilus_harrisii
ENSPTIG00000019200	PRPF8	100	97.438	ENSSFOG00015013905	prpf8	100	97.438	Scleropages_formosus
ENSPTIG00000019200	PRPF8	100	97.309	ENSSMAG00000017736	prpf8	100	97.309	Scophthalmus_maximus
ENSPTIG00000019200	PRPF8	100	97.690	ENSSDUG00000003029	prpf8	100	97.690	Seriola_dumerili
ENSPTIG00000019200	PRPF8	68	98.811	ENSSLDG00000017096	prpf8	100	98.811	Seriola_lalandi_dorsalis
ENSPTIG00000019200	PRPF8	87	99.395	ENSSARG00000002892	PRPF8	87	99.395	Sorex_araneus
ENSPTIG00000019200	PRPF8	100	99.229	ENSSPUG00000007463	PRPF8	100	99.229	Sphenodon_punctatus
ENSPTIG00000019200	PRPF8	100	97.136	ENSSPAG00000015639	prpf8	100	97.136	Stegastes_partitus
ENSPTIG00000019200	PRPF8	100	99.914	ENSSSCG00000017817	PRPF8	100	99.914	Sus_scrofa
ENSPTIG00000019200	PRPF8	52	99.651	ENSTGUG00000015597	-	95	99.651	Taeniopygia_guttata
ENSPTIG00000019200	PRPF8	100	99.400	ENSTGUG00000005648	-	100	99.400	Taeniopygia_guttata
ENSPTIG00000019200	PRPF8	100	97.478	ENSTRUG00000015906	prpf8	100	97.478	Takifugu_rubripes
ENSPTIG00000019200	PRPF8	95	98.626	ENSTNIG00000003460	prpf8	99	98.626	Tetraodon_nigroviridis
ENSPTIG00000019200	PRPF8	93	99.796	ENSTBEG00000006431	PRPF8	93	99.796	Tupaia_belangeri
ENSPTIG00000019200	PRPF8	100	99.315	ENSTTRG00000006869	PRPF8	100	99.315	Tursiops_truncatus
ENSPTIG00000019200	PRPF8	54	99.762	ENSUAMG00000015644	-	96	99.762	Ursus_americanus
ENSPTIG00000019200	PRPF8	100	99.657	ENSUMAG00000009385	PRPF8	100	99.657	Ursus_maritimus
ENSPTIG00000019200	PRPF8	71	99.505	ENSVPAG00000006063	-	71	99.505	Vicugna_pacos
ENSPTIG00000019200	PRPF8	100	99.914	ENSVVUG00000021695	PRPF8	99	99.914	Vulpes_vulpes
ENSPTIG00000019200	PRPF8	100	98.630	ENSXETG00000022259	prpf8	100	98.630	Xenopus_tropicalis
ENSPTIG00000019200	PRPF8	100	97.481	ENSXCOG00000012775	prpf8	100	97.481	Xiphophorus_couchianus
ENSPTIG00000019200	PRPF8	100	97.438	ENSXMAG00000008505	prpf8	100	97.438	Xiphophorus_maculatus