EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000019270 (Gene tree)
Gene ID: 102958714
Gene Symbol: RBM42
Alias: -
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 8173 bases
Position: chrKE722261.1:13939380-13947552
Accession: 102958714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000022541	RRM_1	PF00076.22	5.2e-18	1	1
ENSPTIP00000022524	RRM_1	PF00076.22	5.7e-18	1	1
ENSPTIP00000022512	RRM_1	PF00076.22	6.2e-18	1	1
ENSPTIP00000022552	RRM_1	PF00076.22	5.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000026950	RBM42-202	1592	XM_007096775	ENSPTIP00000022524	455 (aa)	XP_007096837	UPI00042BEC5F
ENSPTIT00000026979	RBM42-205	546	-	ENSPTIP00000022552	181 (aa)	-	UPI000DE7EF6B
ENSPTIT00000026967	RBM42-203	1272	-	ENSPTIP00000022541	423 (aa)	-	-
ENSPTIT00000026972	RBM42-204	1152	-	ENSPTIP00000022545	383 (aa)	-	-
ENSPTIT00000026938	RBM42-201	1658	XM_007096774	ENSPTIP00000022512	477 (aa)	XP_007096836	UPI00042BB038

Gene Model

Click here to download ENSPTIG00000019270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000019270's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000019270	RBM42	100	100.000	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSPTIG00000019270	RBM42	100	100.000	ENSAMEG00000000524	RBM42	100	98.539	Ailuropoda_melanoleuca
ENSPTIG00000019270	RBM42	100	100.000	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSPTIG00000019270	RBM42	100	100.000	ENSBTAG00000013440	RBM42	100	98.242	Bos_taurus
ENSPTIG00000019270	RBM42	100	100.000	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSPTIG00000019270	RBM42	100	100.000	ENSCAFG00020018628	RBM42	100	97.826	Canis_lupus_dingo
ENSPTIG00000019270	RBM42	100	100.000	ENSCHIG00000009518	RBM42	100	97.275	Capra_hircus
ENSPTIG00000019270	RBM42	100	100.000	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSPTIG00000019270	RBM42	81	97.409	ENSCAPG00000009566	RBM42	99	97.409	Cavia_aperea
ENSPTIG00000019270	RBM42	100	100.000	ENSCPOG00000012365	RBM42	99	97.484	Cavia_porcellus
ENSPTIG00000019270	RBM42	100	100.000	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSPTIG00000019270	RBM42	100	100.000	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSPTIG00000019270	RBM42	100	100.000	ENSCLAG00000012865	RBM42	99	97.275	Chinchilla_lanigera
ENSPTIG00000019270	RBM42	100	100.000	ENSCSAG00000004422	RBM42	100	95.852	Chlorocebus_sabaeus
ENSPTIG00000019270	RBM42	100	87.631	ENSCANG00000030272	RBM42	100	87.631	Colobus_angolensis_palliatus
ENSPTIG00000019270	RBM42	100	100.000	ENSCGRG00001018540	Rbm42	99	97.065	Cricetulus_griseus_chok1gshd
ENSPTIG00000019270	RBM42	100	100.000	ENSDNOG00000037397	RBM42	100	96.667	Dasypus_novemcinctus
ENSPTIG00000019270	RBM42	97	100.000	ENSDORG00000013001	Rbm42	99	96.646	Dipodomys_ordii
ENSPTIG00000019270	RBM42	93	92.754	ENSETEG00000007878	RBM42	74	92.754	Echinops_telfairi
ENSPTIG00000019270	RBM42	100	100.000	ENSEASG00005001074	RBM42	100	96.703	Equus_asinus_asinus
ENSPTIG00000019270	RBM42	100	100.000	ENSECAG00000018215	RBM42	100	96.703	Equus_caballus
ENSPTIG00000019270	RBM42	100	100.000	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSPTIG00000019270	RBM42	100	100.000	ENSFDAG00000007440	RBM42	99	96.242	Fukomys_damarensis
ENSPTIG00000019270	RBM42	73	97.183	ENSGAGG00000014805	RBM42	64	92.086	Gopherus_agassizii
ENSPTIG00000019270	RBM42	100	100.000	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSPTIG00000019270	RBM42	96	100.000	ENSHGLG00000008418	RBM42	99	95.388	Heterocephalus_glaber_female
ENSPTIG00000019270	RBM42	96	100.000	ENSHGLG00100018667	RBM42	99	95.388	Heterocephalus_glaber_male
ENSPTIG00000019270	RBM42	100	100.000	ENSSTOG00000013050	RBM42	100	96.646	Ictidomys_tridecemlineatus
ENSPTIG00000019270	RBM42	100	100.000	ENSJJAG00000010421	Rbm42	99	96.226	Jaculus_jaculus
ENSPTIG00000019270	RBM42	97	98.485	ENSLAFG00000014993	RBM42	99	92.034	Loxodonta_africana
ENSPTIG00000019270	RBM42	100	100.000	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSPTIG00000019270	RBM42	100	100.000	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSPTIG00000019270	RBM42	100	100.000	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSPTIG00000019270	RBM42	100	100.000	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSPTIG00000019270	RBM42	100	100.000	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSPTIG00000019270	RBM42	100	100.000	ENSMOCG00000000405	Rbm42	99	97.275	Microtus_ochrogaster
ENSPTIG00000019270	RBM42	83	100.000	ENSMODG00000013957	RBM42	83	84.375	Monodelphis_domestica
ENSPTIG00000019270	RBM42	100	100.000	MGP_CAROLIEiJ_G0029536	Rbm42	99	96.855	Mus_caroli
ENSPTIG00000019270	RBM42	100	100.000	ENSMUSG00000036733	Rbm42	99	96.855	Mus_musculus
ENSPTIG00000019270	RBM42	100	100.000	MGP_PahariEiJ_G0012770	Rbm42	99	97.275	Mus_pahari
ENSPTIG00000019270	RBM42	100	100.000	MGP_SPRETEiJ_G0030632	Rbm42	99	96.855	Mus_spretus
ENSPTIG00000019270	RBM42	100	100.000	ENSMPUG00000006288	RBM42	100	97.802	Mustela_putorius_furo
ENSPTIG00000019270	RBM42	100	100.000	ENSMLUG00000011334	RBM42	100	97.275	Myotis_lucifugus
ENSPTIG00000019270	RBM42	100	100.000	ENSNGAG00000019698	Rbm42	99	96.646	Nannospalax_galili
ENSPTIG00000019270	RBM42	85	84.426	ENSNLEG00000011272	-	94	90.782	Nomascus_leucogenys
ENSPTIG00000019270	RBM42	90	100.000	ENSMEUG00000016300	RBM42	100	83.992	Notamacropus_eugenii
ENSPTIG00000019270	RBM42	100	100.000	ENSOPRG00000001229	RBM42	100	89.518	Ochotona_princeps
ENSPTIG00000019270	RBM42	100	100.000	ENSODEG00000013705	RBM42	99	97.065	Octodon_degus
ENSPTIG00000019270	RBM42	100	100.000	ENSOCUG00000003337	RBM42	100	95.415	Oryctolagus_cuniculus
ENSPTIG00000019270	RBM42	100	100.000	ENSOGAG00000004144	RBM42	100	96.855	Otolemur_garnettii
ENSPTIG00000019270	RBM42	99	100.000	ENSOARG00000004926	RBM42	98	93.908	Ovis_aries
ENSPTIG00000019270	RBM42	100	100.000	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSPTIG00000019270	RBM42	100	100.000	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSPTIG00000019270	RBM42	100	100.000	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSPTIG00000019270	RBM42	100	100.000	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSPTIG00000019270	RBM42	100	100.000	ENSPEMG00000012065	Rbm42	99	97.484	Peromyscus_maniculatus_bairdii
ENSPTIG00000019270	RBM42	100	100.000	ENSPCIG00000015737	RBM42	100	84.583	Phascolarctos_cinereus
ENSPTIG00000019270	RBM42	100	100.000	ENSPPYG00000009871	RBM42	100	96.701	Pongo_abelii
ENSPTIG00000019270	RBM42	90	100.000	ENSPCAG00000013053	RBM42	88	94.505	Procavia_capensis
ENSPTIG00000019270	RBM42	97	75.814	ENSPCOG00000020672	RBM42	81	98.498	Propithecus_coquereli
ENSPTIG00000019270	RBM42	100	100.000	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSPTIG00000019270	RBM42	100	100.000	ENSPVAG00000012815	RBM42	100	98.323	Pteropus_vampyrus
ENSPTIG00000019270	RBM42	100	100.000	ENSRNOG00000024278	Rbm42	99	97.065	Rattus_norvegicus
ENSPTIG00000019270	RBM42	100	100.000	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSPTIG00000019270	RBM42	100	100.000	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSPTIG00000019270	RBM42	90	97.895	ENSSBOG00000030666	RBM42	100	98.276	Saimiri_boliviensis_boliviensis
ENSPTIG00000019270	RBM42	100	87.083	ENSSARG00000010724	RBM42	100	87.083	Sorex_araneus
ENSPTIG00000019270	RBM42	100	100.000	ENSSSCG00000002905	RBM42	100	97.163	Sus_scrofa
ENSPTIG00000019270	RBM42	100	100.000	ENSUAMG00000020711	RBM42	100	98.742	Ursus_americanus
ENSPTIG00000019270	RBM42	100	100.000	ENSUMAG00000020223	RBM42	100	98.742	Ursus_maritimus
ENSPTIG00000019270	RBM42	100	100.000	ENSVVUG00000015117	RBM42	100	97.275	Vulpes_vulpes