EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTIG00000019298 (Gene tree)
Gene ID
102967248
Gene Symbol
PATL1
Alias
-
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Panthera_tigris_altaica
Status
putative
Strand
Plus strand
Length
31387 bases
Position
chrKE721980.1:5975288-6006674
Accession
102967248
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTIP00000022507PAT1PF09770.91.8e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTIT00000026933PATL1-2013937XM_007092039ENSPTIP00000022507770 (aa)XP_007092101UPI00042B9E1B
Gene Model
Click here to download ENSPTIG00000019298's gene model file
Pathways
Pathway IDPathway NameSource
ptg03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000019298's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTIG00000019298PATL16234.156ENSPTIG00000018964PATL28633.470
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTIG00000019298PATL110096.234ENSG00000166889PATL110096.234Homo_sapiens
ENSPTIG00000019298PATL16334.774ENSG00000229474PATL29936.538Homo_sapiens
ENSPTIG00000019298PATL15452.998ENSAPOG00000021290patl19846.115Acanthochromis_polyacanthus
ENSPTIG00000019298PATL16834.082ENSAPOG00000022988patl26334.388Acanthochromis_polyacanthus
ENSPTIG00000019298PATL110097.665ENSAMEG00000014215PATL110097.665Ailuropoda_melanoleuca
ENSPTIG00000019298PATL16233.884ENSAMEG00000014997PATL28832.919Ailuropoda_melanoleuca
ENSPTIG00000019298PATL19646.015ENSACIG00000005182patl19946.393Amphilophus_citrinellus
ENSPTIG00000019298PATL18731.075ENSAOCG00000023738patl25933.528Amphiprion_ocellaris
ENSPTIG00000019298PATL16265.000ENSAPEG00000021391patl18159.722Amphiprion_percula
ENSPTIG00000019298PATL16633.592ENSAPEG00000011299patl27133.006Amphiprion_percula
ENSPTIG00000019298PATL19163.333ENSATEG00000002230patl18354.545Anabas_testudineus
ENSPTIG00000019298PATL16434.122ENSATEG00000019567patl27033.988Anabas_testudineus
ENSPTIG00000019298PATL15339.709ENSAPLG00000003980PATL26439.709Anas_platyrhynchos
ENSPTIG00000019298PATL17170.833ENSAPLG00000013394PATL110071.196Anas_platyrhynchos
ENSPTIG00000019298PATL19980.026ENSACAG00000006607PATL19979.637Anolis_carolinensis
ENSPTIG00000019298PATL110096.753ENSANAG00000023078PATL110096.753Aotus_nancymaae
ENSPTIG00000019298PATL16235.537ENSACLG00000010326patl26034.990Astatotilapia_calliptera
ENSPTIG00000019298PATL16266.667ENSACLG00000005144patl18450.383Astatotilapia_calliptera
ENSPTIG00000019298PATL19830.385ENSAMXG00000020293patl26136.425Astyanax_mexicanus
ENSPTIG00000019298PATL19941.111ENSAMXG00000010731patl19946.097Astyanax_mexicanus
ENSPTIG00000019298PATL110094.812ENSBTAG00000005913PATL110095.720Bos_taurus
ENSPTIG00000019298PATL110096.364ENSCJAG00000016192PATL110096.364Callithrix_jacchus
ENSPTIG00000019298PATL16334.568ENSCJAG00000002379PATL27236.232Callithrix_jacchus
ENSPTIG00000019298PATL16634.436ENSCAFG00000013629PATL27235.990Canis_familiaris
ENSPTIG00000019298PATL110098.184ENSCAFG00000007581PATL110098.184Canis_familiaris
ENSPTIG00000019298PATL19998.170ENSCAFG00020001648PATL110098.170Canis_lupus_dingo
ENSPTIG00000019298PATL16634.436ENSCAFG00020022169PATL27235.990Canis_lupus_dingo
ENSPTIG00000019298PATL110093.515ENSCHIG00000025913PATL110094.423Capra_hircus
ENSPTIG00000019298PATL16236.831ENSCHIG00000026665PATL28536.420Capra_hircus
ENSPTIG00000019298PATL19995.437ENSTSYG00000012748PATL19695.437Carlito_syrichta
ENSPTIG00000019298PATL110090.544ENSCAPG00000013668PATL19991.062Cavia_aperea
ENSPTIG00000019298PATL110088.987ENSCPOG00000006827PATL110089.494Cavia_porcellus
ENSPTIG00000019298PATL110096.883ENSCCAG00000023759PATL110096.883Cebus_capucinus
ENSPTIG00000019298PATL110096.364ENSCATG00000009629PATL110096.364Cercocebus_atys
ENSPTIG00000019298PATL15135.714ENSCLAG00000014407PATL27335.714Chinchilla_lanigera
ENSPTIG00000019298PATL19991.895ENSCLAG00000003427PATL110091.895Chinchilla_lanigera
ENSPTIG00000019298PATL19096.115ENSCSAG00000006095PATL110096.115Chlorocebus_sabaeus
ENSPTIG00000019298PATL16896.244ENSCHOG00000001611PATL18496.244Choloepus_hoffmanni
ENSPTIG00000019298PATL15838.393ENSCPBG00000006150PATL25938.499Chrysemys_picta_bellii
ENSPTIG00000019298PATL19996.489ENSCANG00000039197PATL19996.534Colobus_angolensis_palliatus
ENSPTIG00000019298PATL16334.292ENSCANG00000013856PATL28534.426Colobus_angolensis_palliatus
ENSPTIG00000019298PATL110095.714ENSCGRG00001024927Patl110095.714Cricetulus_griseus_chok1gshd
ENSPTIG00000019298PATL110095.201ENSCGRG00000000461Patl110095.686Cricetulus_griseus_crigri
ENSPTIG00000019298PATL16034.690ENSCSEG00000009438patl26333.750Cynoglossus_semilaevis
ENSPTIG00000019298PATL19265.000ENSCSEG00000008261patl18253.488Cynoglossus_semilaevis
ENSPTIG00000019298PATL15831.197ENSCVAG00000016203patl26330.787Cyprinodon_variegatus
ENSPTIG00000019298PATL18952.153ENSCVAG00000006664patl110047.029Cyprinodon_variegatus
ENSPTIG00000019298PATL16734.515ENSDARG00000089567patl26335.200Danio_rerio
ENSPTIG00000019298PATL19946.602ENSDARG00000017423patl110046.731Danio_rerio
ENSPTIG00000019298PATL19988.773ENSDNOG00000038865PATL19894.465Dasypus_novemcinctus
ENSPTIG00000019298PATL15136.573ENSDORG00000026649Patl27235.806Dipodomys_ordii
ENSPTIG00000019298PATL110095.325ENSDORG00000000237Patl110095.325Dipodomys_ordii
ENSPTIG00000019298PATL110096.114ENSEASG00005007963PATL110096.114Equus_asinus_asinus
ENSPTIG00000019298PATL110094.948ENSECAG00000011411PATL110095.855Equus_caballus
ENSPTIG00000019298PATL16933.458ENSELUG00000023244patl25435.646Esox_lucius
ENSPTIG00000019298PATL18958.730ENSELUG00000024249patl19945.657Esox_lucius
ENSPTIG00000019298PATL16234.568ENSFCAG00000027170PATL28633.607Felis_catus
ENSPTIG00000019298PATL110099.870ENSFCAG00000015573PATL110099.870Felis_catus
ENSPTIG00000019298PATL19980.052ENSFALG00000012150PATL19979.661Ficedula_albicollis
ENSPTIG00000019298PATL19632.656ENSFALG00000009768PATL25538.499Ficedula_albicollis
ENSPTIG00000019298PATL15134.422ENSFDAG00000012242PATL27335.678Fukomys_damarensis
ENSPTIG00000019298PATL19992.157ENSFDAG00000016128PATL110092.418Fukomys_damarensis
ENSPTIG00000019298PATL16266.667ENSFHEG00000017790patl18358.333Fundulus_heteroclitus
ENSPTIG00000019298PATL15831.947ENSGMOG00000005666patl29932.854Gadus_morhua
ENSPTIG00000019298PATL19977.647ENSGALG00000042641PATL110078.170Gallus_gallus
ENSPTIG00000019298PATL16458.904ENSGAFG00000006508patl18458.904Gambusia_affinis
ENSPTIG00000019298PATL18632.440ENSGAFG00000019344patl26335.259Gambusia_affinis
ENSPTIG00000019298PATL19948.067ENSGACG00000016448patl19949.424Gasterosteus_aculeatus
ENSPTIG00000019298PATL110083.700ENSGAGG00000004461PATL110084.097Gopherus_agassizii
ENSPTIG00000019298PATL110096.234ENSGGOG00000004335PATL110096.234Gorilla_gorilla
ENSPTIG00000019298PATL16334.568ENSGGOG00000025923PATL28534.553Gorilla_gorilla
ENSPTIG00000019298PATL16234.711ENSHBUG00000005929patl26535.440Haplochromis_burtoni
ENSPTIG00000019298PATL16266.667ENSHBUG00000005365patl18450.459Haplochromis_burtoni
ENSPTIG00000019298PATL110092.987ENSHGLG00000018173PATL110092.987Heterocephalus_glaber_female
ENSPTIG00000019298PATL19991.373ENSHGLG00100003453PATL110091.373Heterocephalus_glaber_male
ENSPTIG00000019298PATL19930.296ENSHCOG00000016754patl26033.954Hippocampus_comes
ENSPTIG00000019298PATL19265.000ENSHCOG00000001898patl18254.430Hippocampus_comes
ENSPTIG00000019298PATL19896.306ENSSTOG00000013764PATL19996.306Ictidomys_tridecemlineatus
ENSPTIG00000019298PATL15437.108ENSSTOG00000033848PATL27236.386Ictidomys_tridecemlineatus
ENSPTIG00000019298PATL19994.764ENSJJAG00000010135Patl110094.764Jaculus_jaculus
ENSPTIG00000019298PATL16233.682ENSKMAG00000021275patl25435.000Kryptolebias_marmoratus
ENSPTIG00000019298PATL19360.000ENSKMAG00000020848patl18255.556Kryptolebias_marmoratus
ENSPTIG00000019298PATL18730.938ENSLBEG00000022344patl25834.583Labrus_bergylta
ENSPTIG00000019298PATL19268.333ENSLBEG00000023617patl17968.333Labrus_bergylta
ENSPTIG00000019298PATL19857.087ENSLACG00000004640PATL19956.477Latimeria_chalumnae
ENSPTIG00000019298PATL19830.572ENSLACG00000005291-6036.000Latimeria_chalumnae
ENSPTIG00000019298PATL19947.273ENSLOCG00000000717patl19947.700Lepisosteus_oculatus
ENSPTIG00000019298PATL110096.109ENSLAFG00000015161PATL110096.109Loxodonta_africana
ENSPTIG00000019298PATL15137.340ENSLAFG00000031124PATL27136.573Loxodonta_africana
ENSPTIG00000019298PATL16334.568ENSMFAG00000003565PATL28534.426Macaca_fascicularis
ENSPTIG00000019298PATL110096.364ENSMFAG00000040851PATL110096.364Macaca_fascicularis
ENSPTIG00000019298PATL110096.364ENSMMUG00000017287PATL110096.364Macaca_mulatta
ENSPTIG00000019298PATL110096.364ENSMNEG00000038692PATL110096.364Macaca_nemestrina
ENSPTIG00000019298PATL110096.234ENSMLEG00000030044PATL110096.234Mandrillus_leucophaeus
ENSPTIG00000019298PATL16133.970ENSMAMG00000013327patl26434.475Mastacembelus_armatus
ENSPTIG00000019298PATL19645.058ENSMAMG00000003950patl19847.015Mastacembelus_armatus
ENSPTIG00000019298PATL16235.537ENSMZEG00005014292patl26034.990Maylandia_zebra
ENSPTIG00000019298PATL16266.667ENSMZEG00005013404patl18450.383Maylandia_zebra
ENSPTIG00000019298PATL19277.215ENSMGAG00000003406PATL19976.783Meleagris_gallopavo
ENSPTIG00000019298PATL18595.399ENSMAUG00000012059Patl19695.399Mesocricetus_auratus
ENSPTIG00000019298PATL19992.177ENSMICG00000004172PATL19896.994Microcebus_murinus
ENSPTIG00000019298PATL15734.821ENSMOCG00000015367Patl27235.162Microtus_ochrogaster
ENSPTIG00000019298PATL110095.455ENSMOCG00000010087Patl110095.455Microtus_ochrogaster
ENSPTIG00000019298PATL19945.946ENSMMOG00000013711patl110045.655Mola_mola
ENSPTIG00000019298PATL110087.694ENSMODG00000020201PATL110087.565Monodelphis_domestica
ENSPTIG00000019298PATL16236.049ENSMODG00000017690PATL28334.739Monodelphis_domestica
ENSPTIG00000019298PATL17755.496ENSMALG00000018706patl19943.669Monopterus_albus
ENSPTIG00000019298PATL15933.921ENSMALG00000008131patl25234.606Monopterus_albus
ENSPTIG00000019298PATL110094.935MGP_CAROLIEiJ_G0022739Patl110094.935Mus_caroli
ENSPTIG00000019298PATL110095.065ENSMUSG00000046139Patl110095.065Mus_musculus
ENSPTIG00000019298PATL110094.805MGP_PahariEiJ_G0014233Patl110094.805Mus_pahari
ENSPTIG00000019298PATL110095.195MGP_SPRETEiJ_G0023652Patl110095.195Mus_spretus
ENSPTIG00000019298PATL110098.054ENSMPUG00000014607PATL110098.054Mustela_putorius_furo
ENSPTIG00000019298PATL110092.607ENSMLUG00000011169PATL110092.607Myotis_lucifugus
ENSPTIG00000019298PATL110094.961ENSNGAG00000003682Patl110094.961Nannospalax_galili
ENSPTIG00000019298PATL15935.604ENSNBRG00000011745patl26434.091Neolamprologus_brichardi
ENSPTIG00000019298PATL19992.932ENSNLEG00000013081PATL110092.801Nomascus_leucogenys
ENSPTIG00000019298PATL16335.185ENSNLEG00000005673PATL28534.497Nomascus_leucogenys
ENSPTIG00000019298PATL16490.774ENSMEUG00000009391PATL17590.774Notamacropus_eugenii
ENSPTIG00000019298PATL16894.949ENSOPRG00000007963PATL17994.911Ochotona_princeps
ENSPTIG00000019298PATL17392.430ENSODEG00000001792PATL19992.430Octodon_degus
ENSPTIG00000019298PATL16236.289ENSONIG00000011519patl26035.331Oreochromis_niloticus
ENSPTIG00000019298PATL16266.667ENSONIG00000004170patl110048.254Oreochromis_niloticus
ENSPTIG00000019298PATL15137.129ENSOANG00000001538-8437.653Ornithorhynchus_anatinus
ENSPTIG00000019298PATL15287.657ENSOANG00000011117-9687.786Ornithorhynchus_anatinus
ENSPTIG00000019298PATL110096.234ENSOCUG00000002156PATL110096.234Oryctolagus_cuniculus
ENSPTIG00000019298PATL15235.000ENSOCUG00000006339PATL27435.000Oryctolagus_cuniculus
ENSPTIG00000019298PATL16533.465ENSORLG00000005780patl26233.728Oryzias_latipes
ENSPTIG00000019298PATL16433.400ENSORLG00020016506patl26133.465Oryzias_latipes_hni
ENSPTIG00000019298PATL16533.663ENSORLG00015014500patl26233.925Oryzias_latipes_hsok
ENSPTIG00000019298PATL18731.664ENSOMEG00000021628patl26534.638Oryzias_melastigma
ENSPTIG00000019298PATL110096.494ENSOGAG00000004351PATL110096.494Otolemur_garnettii
ENSPTIG00000019298PATL16633.268ENSOGAG00000004709PATL27234.762Otolemur_garnettii
ENSPTIG00000019298PATL16136.287ENSOARG00000003762PATL27237.284Ovis_aries
ENSPTIG00000019298PATL19993.864ENSOARG00000012005PATL19694.778Ovis_aries
ENSPTIG00000019298PATL110096.364ENSPPAG00000034275PATL110096.364Pan_paniscus
ENSPTIG00000019298PATL16335.113ENSPPAG00000007221PATL28434.483Pan_paniscus
ENSPTIG00000019298PATL199100.000ENSPPRG00000020639PATL1100100.000Panthera_pardus
ENSPTIG00000019298PATL16234.362ENSPPRG00000004279PATL28633.676Panthera_pardus
ENSPTIG00000019298PATL19988.220ENSPTRG00000003697PATL110087.958Pan_troglodytes
ENSPTIG00000019298PATL16334.774ENSPTRG00000041536PATL28434.146Pan_troglodytes
ENSPTIG00000019298PATL110096.364ENSPANG00000035620PATL110096.364Papio_anubis
ENSPTIG00000019298PATL19946.446ENSPKIG00000016224patl19947.917Paramormyrops_kingsleyae
ENSPTIG00000019298PATL110083.312ENSPSIG00000016206PATL19682.924Pelodiscus_sinensis
ENSPTIG00000019298PATL15436.993ENSPSIG00000017690PATL29535.484Pelodiscus_sinensis
ENSPTIG00000019298PATL18954.676ENSPMGG00000002644patl19945.192Periophthalmus_magnuspinnatus
ENSPTIG00000019298PATL15934.874ENSPMGG00000014550patl26535.469Periophthalmus_magnuspinnatus
ENSPTIG00000019298PATL110095.584ENSPEMG00000014215Patl110095.584Peromyscus_maniculatus_bairdii
ENSPTIG00000019298PATL16134.025ENSPEMG00000016509Patl27035.550Peromyscus_maniculatus_bairdii
ENSPTIG00000019298PATL16533.333ENSPCIG00000018256PATL27635.961Phascolarctos_cinereus
ENSPTIG00000019298PATL110088.601ENSPCIG00000010852PATL110088.472Phascolarctos_cinereus
ENSPTIG00000019298PATL110046.467ENSPFOG00000007768patl110047.066Poecilia_formosa
ENSPTIG00000019298PATL18632.692ENSPFOG00000007305patl29430.480Poecilia_formosa
ENSPTIG00000019298PATL15553.682ENSPLAG00000018465patl17650.531Poecilia_latipinna
ENSPTIG00000019298PATL19731.860ENSPMEG00000018942patl29430.839Poecilia_mexicana
ENSPTIG00000019298PATL18549.772ENSPMEG00000006555patl17650.531Poecilia_mexicana
ENSPTIG00000019298PATL17449.040ENSPREG00000003874patl17050.262Poecilia_reticulata
ENSPTIG00000019298PATL18730.147ENSPREG00000023066patl25136.336Poecilia_reticulata
ENSPTIG00000019298PATL110096.753ENSPPYG00000003230PATL110096.753Pongo_abelii
ENSPTIG00000019298PATL15337.198ENSPCOG00000000295PATL29938.462Propithecus_coquereli
ENSPTIG00000019298PATL110096.234ENSPCOG00000020770PATL110096.234Propithecus_coquereli
ENSPTIG00000019298PATL18589.634ENSPVAG00000015239PATL110090.549Pteropus_vampyrus
ENSPTIG00000019298PATL16234.298ENSPNYG00000017381patl26534.989Pundamilia_nyererei
ENSPTIG00000019298PATL17853.172ENSPNYG00000018936patl19653.153Pundamilia_nyererei
ENSPTIG00000019298PATL16235.430ENSPNAG00000002315patl26334.864Pygocentrus_nattereri
ENSPTIG00000019298PATL19944.511ENSPNAG00000017907patl18462.295Pygocentrus_nattereri
ENSPTIG00000019298PATL110094.675ENSRNOG00000021052Patl110094.675Rattus_norvegicus
ENSPTIG00000019298PATL110085.963ENSRBIG00000032263PATL110085.963Rhinopithecus_bieti
ENSPTIG00000019298PATL110096.494ENSRROG00000032861PATL110096.494Rhinopithecus_roxellana
ENSPTIG00000019298PATL110096.494ENSSBOG00000025195PATL110096.494Saimiri_boliviensis_boliviensis
ENSPTIG00000019298PATL110088.372ENSSHAG00000004309PATL110088.243Sarcophilus_harrisii
ENSPTIG00000019298PATL15636.018ENSSFOG00015000720patl25836.161Scleropages_formosus
ENSPTIG00000019298PATL19944.952ENSSFOG00015009614patl19945.868Scleropages_formosus
ENSPTIG00000019298PATL19261.667ENSSMAG00000009482patl18153.086Scophthalmus_maximus
ENSPTIG00000019298PATL16234.511ENSSMAG00000017262patl26734.483Scophthalmus_maximus
ENSPTIG00000019298PATL18730.588ENSSDUG00000022927patl26034.161Seriola_dumerili
ENSPTIG00000019298PATL19268.333ENSSDUG00000005362patl17959.722Seriola_dumerili
ENSPTIG00000019298PATL19266.667ENSSLDG00000019146patl17958.333Seriola_lalandi_dorsalis
ENSPTIG00000019298PATL16134.947ENSSLDG00000017922patl26433.895Seriola_lalandi_dorsalis
ENSPTIG00000019298PATL18097.619ENSSARG00000009600PATL18097.619Sorex_araneus
ENSPTIG00000019298PATL15136.387ENSSARG00000009047PATL27635.369Sorex_araneus
ENSPTIG00000019298PATL110081.842ENSSPUG00000009453PATL110081.712Sphenodon_punctatus
ENSPTIG00000019298PATL16433.665ENSSPAG00000004784patl26832.803Stegastes_partitus
ENSPTIG00000019298PATL15452.998ENSSPAG00000003187patl19846.658Stegastes_partitus
ENSPTIG00000019298PATL110097.017ENSSSCG00000013124PATL110097.017Sus_scrofa
ENSPTIG00000019298PATL15236.725ENSTGUG00000004619-9837.871Taeniopygia_guttata
ENSPTIG00000019298PATL19980.000ENSTGUG00000006222PATL110079.221Taeniopygia_guttata
ENSPTIG00000019298PATL19453.165ENSTRUG00000000709patl19944.608Takifugu_rubripes
ENSPTIG00000019298PATL16633.786ENSTRUG00000005647patl26233.820Takifugu_rubripes
ENSPTIG00000019298PATL19094.406ENSTBEG00000000796PATL19094.406Tupaia_belangeri
ENSPTIG00000019298PATL17295.707ENSTTRG00000009389PATL18495.674Tursiops_truncatus
ENSPTIG00000019298PATL16234.016ENSUAMG00000018533PATL28433.333Ursus_americanus
ENSPTIG00000019298PATL19998.026ENSUMAG00000018634PATL110098.276Ursus_maritimus
ENSPTIG00000019298PATL16234.631ENSUMAG00000007738PATL28433.539Ursus_maritimus
ENSPTIG00000019298PATL16597.024ENSVPAG00000009224PATL17697.024Vicugna_pacos
ENSPTIG00000019298PATL16634.630ENSVVUG00000011576PATL27235.990Vulpes_vulpes
ENSPTIG00000019298PATL110097.665ENSVVUG00000016668PATL110098.132Vulpes_vulpes
ENSPTIG00000019298PATL15337.198ENSXETG00000014167patl27534.818Xenopus_tropicalis
ENSPTIG00000019298PATL16161.404ENSXCOG00000010808patl19861.404Xiphophorus_couchianus
ENSPTIG00000019298PATL16265.000ENSXMAG00000013834patl18456.164Xiphophorus_maculatus
ENSPTIG00000019298PATL19730.435ENSXMAG00000018464patl25436.386Xiphophorus_maculatus

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