EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000019473 (Gene tree)
Gene ID: -
Gene Symbol: RRP1
Alias: -
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 13693 bases
Position: chrKE721904.1:1313337-1327029
Accession: 18785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000022797	Nop52	PF05997.12	7.7e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000027231	RRP1-201	1272	-	ENSPTIP00000022797	424 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000019473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000019473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000019473	RRP1	74	43.620	ENSPTIG00000016894	RRP1B	56	42.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000019473	RRP1	86	62.895	ENSG00000160214	RRP1	84	61.750	Homo_sapiens
ENSPTIG00000019473	RRP1	88	70.984	ENSAMEG00000011448	RRP1	83	70.725	Ailuropoda_melanoleuca
ENSPTIG00000019473	RRP1	64	44.643	ENSACIG00000019121	rrp1	73	38.420	Amphilophus_citrinellus
ENSPTIG00000019473	RRP1	70	45.215	ENSAOCG00000017894	-	68	44.516	Amphiprion_ocellaris
ENSPTIG00000019473	RRP1	78	45.954	ENSAPLG00000004310	RRP1B	52	43.351	Anas_platyrhynchos
ENSPTIG00000019473	RRP1	86	58.684	ENSANAG00000037815	RRP1	84	57.935	Aotus_nancymaae
ENSPTIG00000019473	RRP1	87	58.225	ENSBTAG00000003981	RRP1	89	58.486	Bos_taurus
ENSPTIG00000019473	RRP1	87	59.500	ENSCJAG00000043205	RRP1	80	59.900	Callithrix_jacchus
ENSPTIG00000019473	RRP1	89	67.822	ENSCAFG00000010646	RRP1	91	63.014	Canis_familiaris
ENSPTIG00000019473	RRP1	89	67.822	ENSCAFG00020018979	RRP1	85	67.822	Canis_lupus_dingo
ENSPTIG00000019473	RRP1	87	59.173	ENSCHIG00000020948	RRP1	83	59.530	Capra_hircus
ENSPTIG00000019473	RRP1	76	59.229	ENSTSYG00000012831	RRP1	83	59.694	Carlito_syrichta
ENSPTIG00000019473	RRP1	76	58.516	ENSCAPG00000008576	RRP1	90	58.402	Cavia_aperea
ENSPTIG00000019473	RRP1	87	56.234	ENSCPOG00000038986	RRP1	83	59.536	Cavia_porcellus
ENSPTIG00000019473	RRP1	88	60.750	ENSCCAG00000029828	RRP1	84	60.500	Cebus_capucinus
ENSPTIG00000019473	RRP1	67	48.829	ENSCCAG00000029384	RRP1B	56	42.670	Cebus_capucinus
ENSPTIG00000019473	RRP1	86	60.574	ENSCATG00000015632	RRP1	84	61.000	Cercocebus_atys
ENSPTIG00000019473	RRP1	87	61.299	ENSCLAG00000011639	RRP1	83	61.458	Chinchilla_lanigera
ENSPTIG00000019473	RRP1	66	66.323	ENSCSAG00000007936	RRP1	87	67.010	Chlorocebus_sabaeus
ENSPTIG00000019473	RRP1	73	52.632	ENSCPBG00000010310	RRP1B	50	47.397	Chrysemys_picta_bellii
ENSPTIG00000019473	RRP1	71	63.057	ENSCANG00000042611	RRP1	84	56.283	Colobus_angolensis_palliatus
ENSPTIG00000019473	RRP1	79	44.693	ENSCGRG00001010889	-	50	42.408	Cricetulus_griseus_chok1gshd
ENSPTIG00000019473	RRP1	87	56.186	ENSCGRG00001011920	Rrp1	86	56.186	Cricetulus_griseus_chok1gshd
ENSPTIG00000019473	RRP1	79	44.759	ENSCGRG00001023882	-	50	42.971	Cricetulus_griseus_chok1gshd
ENSPTIG00000019473	RRP1	87	56.186	ENSCGRG00000008915	Rrp1	86	56.186	Cricetulus_griseus_crigri
ENSPTIG00000019473	RRP1	79	44.663	ENSCGRG00000001553	Rrp1b	51	42.368	Cricetulus_griseus_crigri
ENSPTIG00000019473	RRP1	70	43.450	ENSCSEG00000020711	-	57	43.450	Cynoglossus_semilaevis
ENSPTIG00000019473	RRP1	75	41.141	ENSCVAG00000017568	-	82	40.367	Cyprinodon_variegatus
ENSPTIG00000019473	RRP1	70	43.279	ENSDARG00000103337	rrp1	54	39.075	Danio_rerio
ENSPTIG00000019473	RRP1	88	61.637	ENSDNOG00000019880	RRP1	83	60.459	Dasypus_novemcinctus
ENSPTIG00000019473	RRP1	71	60.494	ENSDORG00000002104	Rrp1	90	57.256	Dipodomys_ordii
ENSPTIG00000019473	RRP1	62	46.763	ENSDORG00000005496	Rrp1b	51	41.226	Dipodomys_ordii
ENSPTIG00000019473	RRP1	65	50.871	ENSETEG00000002963	-	63	49.826	Echinops_telfairi
ENSPTIG00000019473	RRP1	87	63.402	ENSEASG00005001673	RRP1	85	64.524	Equus_asinus_asinus
ENSPTIG00000019473	RRP1	87	64.858	ENSECAG00000015703	RRP1	86	65.116	Equus_caballus
ENSPTIG00000019473	RRP1	86	40.541	ENSELUG00000015885	-	82	43.522	Esox_lucius
ENSPTIG00000019473	RRP1	86	82.400	ENSFCAG00000008434	RRP1	83	82.677	Felis_catus
ENSPTIG00000019473	RRP1	88	57.881	ENSFDAG00000013728	RRP1	84	57.881	Fukomys_damarensis
ENSPTIG00000019473	RRP1	81	39.437	ENSGACG00000001438	rrp1	53	40.525	Gasterosteus_aculeatus
ENSPTIG00000019473	RRP1	70	53.226	ENSGAGG00000000375	RRP1B	51	44.810	Gopherus_agassizii
ENSPTIG00000019473	RRP1	86	62.632	ENSGGOG00000000173	RRP1	84	61.500	Gorilla_gorilla
ENSPTIG00000019473	RRP1	72	41.104	ENSHBUG00000003766	-	51	39.259	Haplochromis_burtoni
ENSPTIG00000019473	RRP1	79	44.944	ENSHGLG00000004968	RRP1B	56	43.005	Heterocephalus_glaber_female
ENSPTIG00000019473	RRP1	71	62.342	ENSHGLG00000017085	RRP1	79	58.115	Heterocephalus_glaber_female
ENSPTIG00000019473	RRP1	72	43.161	ENSHGLG00100002232	RRP1B	51	41.408	Heterocephalus_glaber_male
ENSPTIG00000019473	RRP1	68	41.139	ENSIPUG00000000673	-	68	38.244	Ictalurus_punctatus
ENSPTIG00000019473	RRP1	81	63.277	ENSSTOG00000011116	RRP1	80	62.712	Ictidomys_tridecemlineatus
ENSPTIG00000019473	RRP1	71	64.194	ENSJJAG00000018886	Rrp1	82	57.880	Jaculus_jaculus
ENSPTIG00000019473	RRP1	70	40.741	ENSLBEG00000021417	RRP1	89	39.776	Labrus_bergylta
ENSPTIG00000019473	RRP1	73	46.483	ENSLAFG00000000766	RRP1B	77	45.260	Loxodonta_africana
ENSPTIG00000019473	RRP1	76	61.143	ENSLAFG00000022901	RRP1	83	56.675	Loxodonta_africana
ENSPTIG00000019473	RRP1	87	60.652	ENSMFAG00000003202	RRP1	84	61.153	Macaca_fascicularis
ENSPTIG00000019473	RRP1	67	49.498	ENSMMUG00000000104	RRP1B	50	43.194	Macaca_mulatta
ENSPTIG00000019473	RRP1	87	60.150	ENSMMUG00000012304	RRP1	84	60.652	Macaca_mulatta
ENSPTIG00000019473	RRP1	87	60.500	ENSMNEG00000031210	RRP1	84	60.401	Macaca_nemestrina
ENSPTIG00000019473	RRP1	71	66.984	ENSMLEG00000037797	RRP1	92	61.500	Mandrillus_leucophaeus
ENSPTIG00000019473	RRP1	67	49.664	ENSMLEG00000040044	RRP1B	52	43.045	Mandrillus_leucophaeus
ENSPTIG00000019473	RRP1	71	50.321	ENSMAUG00000017653	Rrp1	81	48.238	Mesocricetus_auratus
ENSPTIG00000019473	RRP1	86	60.622	ENSMICG00000004700	RRP1	85	60.104	Microcebus_murinus
ENSPTIG00000019473	RRP1	79	43.855	ENSMICG00000004686	RRP1B	53	42.000	Microcebus_murinus
ENSPTIG00000019473	RRP1	87	44.725	ENSMOCG00000015687	Rrp1	87	45.775	Microtus_ochrogaster
ENSPTIG00000019473	RRP1	74	40.741	ENSMMOG00000019175	rrp1	82	41.358	Mola_mola
ENSPTIG00000019473	RRP1	71	55.238	ENSMODG00000021036	-	53	48.942	Monodelphis_domestica
ENSPTIG00000019473	RRP1	69	47.573	ENSMODG00000021033	RRP1B	51	42.857	Monodelphis_domestica
ENSPTIG00000019473	RRP1	70	45.779	ENSMALG00000010310	rrp1	80	44.625	Monopterus_albus
ENSPTIG00000019473	RRP1	87	47.404	MGP_CAROLIEiJ_G0015508	Rrp1	73	64.767	Mus_caroli
ENSPTIG00000019473	RRP1	71	62.319	ENSMUSG00000061032	Rrp1	88	42.045	Mus_musculus
ENSPTIG00000019473	RRP1	64	65.482	MGP_PahariEiJ_G0030921	Rrp1	76	56.098	Mus_pahari
ENSPTIG00000019473	RRP1	88	61.722	MGP_SPRETEiJ_G0016321	Rrp1	70	64.249	Mus_spretus
ENSPTIG00000019473	RRP1	85	60.606	ENSMPUG00000009826	RRP1	73	75.130	Mustela_putorius_furo
ENSPTIG00000019473	RRP1	85	67.544	ENSMLUG00000017788	RRP1	74	67.841	Myotis_lucifugus
ENSPTIG00000019473	RRP1	82	46.766	ENSNGAG00000022344	Rrp1	73	60.000	Nannospalax_galili
ENSPTIG00000019473	RRP1	67	49.498	ENSNLEG00000001490	RRP1B	51	43.194	Nomascus_leucogenys
ENSPTIG00000019473	RRP1	86	62.467	ENSNLEG00000034734	RRP1	84	61.347	Nomascus_leucogenys
ENSPTIG00000019473	RRP1	73	57.009	ENSOPRG00000001319	RRP1	87	57.632	Ochotona_princeps
ENSPTIG00000019473	RRP1	71	40.909	ENSONIG00000004264	rrp1	53	36.693	Oreochromis_niloticus
ENSPTIG00000019473	RRP1	70	48.232	ENSOANG00000006470	RRP1B	56	40.509	Ornithorhynchus_anatinus
ENSPTIG00000019473	RRP1	70	51.466	ENSOANG00000006472	-	91	45.773	Ornithorhynchus_anatinus
ENSPTIG00000019473	RRP1	57	63.636	ENSOCUG00000022843	-	71	62.585	Oryctolagus_cuniculus
ENSPTIG00000019473	RRP1	67	48.311	ENSOGAG00000009872	RRP1B	56	40.470	Otolemur_garnettii
ENSPTIG00000019473	RRP1	81	61.496	ENSOGAG00000006105	RRP1	82	59.898	Otolemur_garnettii
ENSPTIG00000019473	RRP1	87	54.856	ENSOARG00000011434	RRP1	83	54.897	Ovis_aries
ENSPTIG00000019473	RRP1	86	62.632	ENSPPAG00000029050	RRP1	84	61.500	Pan_paniscus
ENSPTIG00000019473	RRP1	74	44.379	ENSPPRG00000010356	RRP1B	55	41.176	Panthera_pardus
ENSPTIG00000019473	RRP1	86	82.888	ENSPPRG00000010656	RRP1	83	82.940	Panthera_pardus
ENSPTIG00000019473	RRP1	86	62.368	ENSPTRG00000013962	RRP1	84	61.250	Pan_troglodytes
ENSPTIG00000019473	RRP1	86	61.680	ENSPANG00000015097	RRP1	84	60.750	Papio_anubis
ENSPTIG00000019473	RRP1	71	33.750	ENSPMGG00000007512	-	84	31.653	Periophthalmus_magnuspinnatus
ENSPTIG00000019473	RRP1	71	62.300	ENSPEMG00000018421	Rrp1	83	58.021	Peromyscus_maniculatus_bairdii
ENSPTIG00000019473	RRP1	83	50.267	ENSPCIG00000015523	-	77	51.977	Phascolarctos_cinereus
ENSPTIG00000019473	RRP1	73	46.667	ENSPCIG00000015513	RRP1B	53	43.536	Phascolarctos_cinereus
ENSPTIG00000019473	RRP1	86	62.205	ENSPPYG00000011474	RRP1	84	61.097	Pongo_abelii
ENSPTIG00000019473	RRP1	66	49.135	ENSPCAG00000008370	-	78	49.658	Procavia_capensis
ENSPTIG00000019473	RRP1	71	63.158	ENSPCOG00000017706	RRP1	73	61.538	Propithecus_coquereli
ENSPTIG00000019473	RRP1	72	45.427	ENSPCOG00000017927	RRP1B	53	42.500	Propithecus_coquereli
ENSPTIG00000019473	RRP1	71	51.724	ENSPVAG00000009925	-	65	51.724	Pteropus_vampyrus
ENSPTIG00000019473	RRP1	72	57.357	ENSRNOG00000001203	Rrp1	87	54.408	Rattus_norvegicus
ENSPTIG00000019473	RRP1	71	66.667	ENSRBIG00000032082	RRP1	80	61.579	Rhinopithecus_bieti
ENSPTIG00000019473	RRP1	67	49.498	ENSRROG00000031499	RRP1B	54	43.194	Rhinopithecus_roxellana
ENSPTIG00000019473	RRP1	86	57.828	ENSRROG00000039799	RRP1	84	60.000	Rhinopithecus_roxellana
ENSPTIG00000019473	RRP1	83	61.538	ENSSBOG00000034689	RRP1	84	60.256	Saimiri_boliviensis_boliviensis
ENSPTIG00000019473	RRP1	67	44.444	ENSSBOG00000034727	RRP1B	53	39.558	Saimiri_boliviensis_boliviensis
ENSPTIG00000019473	RRP1	72	52.681	ENSSHAG00000010304	-	96	50.448	Sarcophilus_harrisii
ENSPTIG00000019473	RRP1	72	43.925	ENSSMAG00000016847	-	73	43.729	Scophthalmus_maximus
ENSPTIG00000019473	RRP1	75	46.176	ENSSSCG00000021698	RRP1B	51	44.000	Sus_scrofa
ENSPTIG00000019473	RRP1	85	61.905	ENSSSCG00000037061	RRP1	83	61.917	Sus_scrofa
ENSPTIG00000019473	RRP1	70	44.337	ENSTRUG00000017592	rrp1	87	44.337	Takifugu_rubripes
ENSPTIG00000019473	RRP1	73	43.260	ENSTNIG00000005053	rrp1	51	43.887	Tetraodon_nigroviridis
ENSPTIG00000019473	RRP1	59	74.000	ENSTBEG00000001260	-	56	74.000	Tupaia_belangeri
ENSPTIG00000019473	RRP1	82	43.207	ENSTBEG00000000422	RRP1B	61	43.207	Tupaia_belangeri
ENSPTIG00000019473	RRP1	64	60.000	ENSTTRG00000011162	RRP1	68	55.215	Tursiops_truncatus
ENSPTIG00000019473	RRP1	69	65.161	ENSUAMG00000014189	-	90	63.871	Ursus_americanus
ENSPTIG00000019473	RRP1	79	44.538	ENSUMAG00000025510	RRP1B	68	44.044	Ursus_maritimus
ENSPTIG00000019473	RRP1	88	70.663	ENSUMAG00000025507	RRP1	92	68.750	Ursus_maritimus
ENSPTIG00000019473	RRP1	63	62.898	ENSVVUG00000024498	-	68	62.807	Vulpes_vulpes