EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000019649 (Gene tree)
Gene ID: 102970394
Gene Symbol: GPATCH1
Alias: -
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 39445 bases
Position: chrKE722261.1:11865803-11905247
Accession: 102970394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000023034	DUF1604	PF07713.13	1e-35	1	1
ENSPTIP00000023034	G-patch	PF01585.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000027484	GPATCH1-201	3058	XM_007096734	ENSPTIP00000023034	932 (aa)	XP_007096796	UPI00042C0AAD

Gene Model

Click here to download ENSPTIG00000019649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000019649's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000019649	GPATCH1	100	89.175	ENSG00000076650	GPATCH1	100	89.389	Homo_sapiens
ENSPTIG00000019649	GPATCH1	100	93.777	ENSAMEG00000015575	GPATCH1	100	93.777	Ailuropoda_melanoleuca
ENSPTIG00000019649	GPATCH1	81	70.166	ENSAOCG00000006668	gpatch1	80	70.166	Amphiprion_ocellaris
ENSPTIG00000019649	GPATCH1	81	54.486	ENSAPEG00000000026	gpatch1	90	52.139	Amphiprion_percula
ENSPTIG00000019649	GPATCH1	89	50.171	ENSATEG00000014494	gpatch1	90	51.484	Anabas_testudineus
ENSPTIG00000019649	GPATCH1	90	61.676	ENSAPLG00000007584	GPATCH1	96	61.335	Anas_platyrhynchos
ENSPTIG00000019649	GPATCH1	100	88.960	ENSANAG00000027002	GPATCH1	100	88.960	Aotus_nancymaae
ENSPTIG00000019649	GPATCH1	81	53.512	ENSACLG00000024740	gpatch1	83	53.244	Astatotilapia_calliptera
ENSPTIG00000019649	GPATCH1	91	51.852	ENSAMXG00000020177	gpatch1	97	52.360	Astyanax_mexicanus
ENSPTIG00000019649	GPATCH1	91	90.931	ENSBTAG00000000721	GPATCH1	100	86.481	Bos_taurus
ENSPTIG00000019649	GPATCH1	100	88.532	ENSCJAG00000000684	GPATCH1	100	88.532	Callithrix_jacchus
ENSPTIG00000019649	GPATCH1	100	93.140	ENSCAFG00000007457	GPATCH1	84	93.140	Canis_familiaris
ENSPTIG00000019649	GPATCH1	94	93.364	ENSCAFG00020019731	GPATCH1	91	93.302	Canis_lupus_dingo
ENSPTIG00000019649	GPATCH1	99	91.658	ENSCHIG00000019626	GPATCH1	100	87.446	Capra_hircus
ENSPTIG00000019649	GPATCH1	97	78.878	ENSCAPG00000008827	GPATCH1	100	79.428	Cavia_aperea
ENSPTIG00000019649	GPATCH1	100	81.711	ENSCPOG00000024477	GPATCH1	100	82.139	Cavia_porcellus
ENSPTIG00000019649	GPATCH1	100	88.424	ENSCCAG00000024676	GPATCH1	100	88.424	Cebus_capucinus
ENSPTIG00000019649	GPATCH1	100	89.186	ENSCATG00000043637	GPATCH1	100	89.068	Cercocebus_atys
ENSPTIG00000019649	GPATCH1	96	83.091	ENSCLAG00000003395	-	100	83.203	Chinchilla_lanigera
ENSPTIG00000019649	GPATCH1	100	86.510	ENSCSAG00000004743	GPATCH1	100	86.724	Chlorocebus_sabaeus
ENSPTIG00000019649	GPATCH1	92	77.315	ENSCHOG00000012865	GPATCH1	89	80.804	Choloepus_hoffmanni
ENSPTIG00000019649	GPATCH1	78	69.494	ENSCPBG00000000666	GPATCH1	92	69.494	Chrysemys_picta_bellii
ENSPTIG00000019649	GPATCH1	93	32.366	ENSCING00000012518	-	99	33.333	Ciona_intestinalis
ENSPTIG00000019649	GPATCH1	93	85.714	ENSCANG00000012540	GPATCH1	100	86.207	Colobus_angolensis_palliatus
ENSPTIG00000019649	GPATCH1	97	82.088	ENSCGRG00001016736	Gpatch1	100	82.088	Cricetulus_griseus_chok1gshd
ENSPTIG00000019649	GPATCH1	93	68.126	ENSCGRG00000005069	Gpatch1	91	67.099	Cricetulus_griseus_crigri
ENSPTIG00000019649	GPATCH1	78	50.773	ENSCSEG00000019456	-	84	61.468	Cynoglossus_semilaevis
ENSPTIG00000019649	GPATCH1	90	50.497	ENSDARG00000033418	gpatch1	92	51.111	Danio_rerio
ENSPTIG00000019649	GPATCH1	91	87.427	ENSDNOG00000005291	GPATCH1	95	87.427	Dasypus_novemcinctus
ENSPTIG00000019649	GPATCH1	94	79.977	ENSDORG00000012546	Gpatch1	95	80.024	Dipodomys_ordii
ENSPTIG00000019649	GPATCH1	69	34.253	FBgn0036386	CG8833	67	34.543	Drosophila_melanogaster
ENSPTIG00000019649	GPATCH1	99	76.706	ENSETEG00000003626	GPATCH1	92	77.556	Echinops_telfairi
ENSPTIG00000019649	GPATCH1	94	37.281	ENSEBUG00000011286	gpatch1	91	37.975	Eptatretus_burgeri
ENSPTIG00000019649	GPATCH1	91	89.929	ENSEASG00005021162	GPATCH1	93	91.034	Equus_asinus_asinus
ENSPTIG00000019649	GPATCH1	94	90.951	ENSECAG00000022743	GPATCH1	88	90.706	Equus_caballus
ENSPTIG00000019649	GPATCH1	78	79.902	ENSEEUG00000012925	GPATCH1	78	79.902	Erinaceus_europaeus
ENSPTIG00000019649	GPATCH1	99	49.693	ENSELUG00000018195	gpatch1	90	50.668	Esox_lucius
ENSPTIG00000019649	GPATCH1	100	98.391	ENSFCAG00000014917	GPATCH1	100	98.391	Felis_catus
ENSPTIG00000019649	GPATCH1	99	63.002	ENSFALG00000007821	GPATCH1	89	63.090	Ficedula_albicollis
ENSPTIG00000019649	GPATCH1	96	83.073	ENSFDAG00000003871	GPATCH1	100	83.073	Fukomys_damarensis
ENSPTIG00000019649	GPATCH1	75	51.972	ENSGMOG00000003830	gpatch1	95	51.972	Gadus_morhua
ENSPTIG00000019649	GPATCH1	93	64.059	ENSGALG00000004839	GPATCH1	93	64.075	Gallus_gallus
ENSPTIG00000019649	GPATCH1	81	51.295	ENSGACG00000017544	gpatch1	94	48.454	Gasterosteus_aculeatus
ENSPTIG00000019649	GPATCH1	100	65.084	ENSGAGG00000010067	GPATCH1	100	64.979	Gopherus_agassizii
ENSPTIG00000019649	GPATCH1	98	88.550	ENSGGOG00000010862	GPATCH1	100	89.427	Gorilla_gorilla
ENSPTIG00000019649	GPATCH1	81	53.846	ENSHBUG00000023462	gpatch1	91	51.361	Haplochromis_burtoni
ENSPTIG00000019649	GPATCH1	100	84.261	ENSHGLG00000009334	GPATCH1	100	84.475	Heterocephalus_glaber_female
ENSPTIG00000019649	GPATCH1	100	84.368	ENSHGLG00100018074	GPATCH1	100	84.582	Heterocephalus_glaber_male
ENSPTIG00000019649	GPATCH1	93	51.545	ENSIPUG00000014977	gpatch1	90	52.847	Ictalurus_punctatus
ENSPTIG00000019649	GPATCH1	100	88.317	ENSSTOG00000003720	GPATCH1	100	88.317	Ictidomys_tridecemlineatus
ENSPTIG00000019649	GPATCH1	91	84.335	ENSJJAG00000023765	Gpatch1	100	83.996	Jaculus_jaculus
ENSPTIG00000019649	GPATCH1	89	52.381	ENSKMAG00000017950	gpatch1	89	52.260	Kryptolebias_marmoratus
ENSPTIG00000019649	GPATCH1	81	51.880	ENSLBEG00000026527	gpatch1	88	50.281	Labrus_bergylta
ENSPTIG00000019649	GPATCH1	88	58.873	ENSLACG00000008130	GPATCH1	90	59.113	Latimeria_chalumnae
ENSPTIG00000019649	GPATCH1	81	57.658	ENSLOCG00000001800	gpatch1	90	53.628	Lepisosteus_oculatus
ENSPTIG00000019649	GPATCH1	99	89.554	ENSLAFG00000013589	GPATCH1	100	89.592	Loxodonta_africana
ENSPTIG00000019649	GPATCH1	90	89.430	ENSMFAG00000034418	GPATCH1	95	89.430	Macaca_fascicularis
ENSPTIG00000019649	GPATCH1	100	88.865	ENSMMUG00000011790	GPATCH1	100	88.865	Macaca_mulatta
ENSPTIG00000019649	GPATCH1	100	88.746	ENSMNEG00000045084	GPATCH1	100	88.960	Macaca_nemestrina
ENSPTIG00000019649	GPATCH1	100	77.921	ENSMLEG00000043840	GPATCH1	100	78.028	Mandrillus_leucophaeus
ENSPTIG00000019649	GPATCH1	81	53.768	ENSMZEG00005001926	gpatch1	83	53.244	Maylandia_zebra
ENSPTIG00000019649	GPATCH1	90	63.915	ENSMGAG00000005775	GPATCH1	89	63.680	Meleagris_gallopavo
ENSPTIG00000019649	GPATCH1	90	80.307	ENSMICG00000004829	GPATCH1	93	80.425	Microcebus_murinus
ENSPTIG00000019649	GPATCH1	99	82.239	ENSMOCG00000000174	Gpatch1	100	82.239	Microtus_ochrogaster
ENSPTIG00000019649	GPATCH1	81	50.820	ENSMMOG00000002140	gpatch1	87	51.515	Mola_mola
ENSPTIG00000019649	GPATCH1	91	74.765	ENSMODG00000012226	GPATCH1	100	73.701	Monodelphis_domestica
ENSPTIG00000019649	GPATCH1	99	47.363	ENSMALG00000014386	gpatch1	91	49.772	Monopterus_albus
ENSPTIG00000019649	GPATCH1	100	84.120	ENSMUSG00000063808	Gpatch1	100	94.898	Mus_musculus
ENSPTIG00000019649	GPATCH1	100	83.619	MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	Mus_pahari
ENSPTIG00000019649	GPATCH1	100	83.601	MGP_SPRETEiJ_G0030681	Gpatch1	100	95.918	Mus_spretus
ENSPTIG00000019649	GPATCH1	100	92.918	ENSMPUG00000007658	GPATCH1	100	92.918	Mustela_putorius_furo
ENSPTIG00000019649	GPATCH1	100	88.841	ENSMLUG00000012161	GPATCH1	100	85.622	Myotis_lucifugus
ENSPTIG00000019649	GPATCH1	100	84.871	ENSNGAG00000012455	Gpatch1	100	84.764	Nannospalax_galili
ENSPTIG00000019649	GPATCH1	100	89.068	ENSNLEG00000007659	GPATCH1	100	89.282	Nomascus_leucogenys
ENSPTIG00000019649	GPATCH1	79	67.667	ENSMEUG00000015174	GPATCH1	79	67.030	Notamacropus_eugenii
ENSPTIG00000019649	GPATCH1	99	81.799	ENSODEG00000007103	GPATCH1	99	82.208	Octodon_degus
ENSPTIG00000019649	GPATCH1	81	55.297	ENSONIG00000003302	gpatch1	91	52.650	Oreochromis_niloticus
ENSPTIG00000019649	GPATCH1	99	70.267	ENSOANG00000012732	GPATCH1	99	68.528	Ornithorhynchus_anatinus
ENSPTIG00000019649	GPATCH1	100	87.876	ENSOCUG00000015905	GPATCH1	100	87.876	Oryctolagus_cuniculus
ENSPTIG00000019649	GPATCH1	99	47.574	ENSORLG00000018706	gpatch1	88	50.293	Oryzias_latipes
ENSPTIG00000019649	GPATCH1	89	48.953	ENSOMEG00000022688	gpatch1	90	49.131	Oryzias_melastigma
ENSPTIG00000019649	GPATCH1	85	88.748	ENSOGAG00000004016	GPATCH1	100	88.748	Otolemur_garnettii
ENSPTIG00000019649	GPATCH1	90	91.686	ENSOARG00000004365	GPATCH1	99	87.027	Ovis_aries
ENSPTIG00000019649	GPATCH1	100	88.746	ENSPPAG00000020990	GPATCH1	100	88.960	Pan_paniscus
ENSPTIG00000019649	GPATCH1	100	98.820	ENSPPRG00000017245	GPATCH1	100	98.820	Panthera_pardus
ENSPTIG00000019649	GPATCH1	100	88.853	ENSPTRG00000010803	GPATCH1	100	89.068	Pan_troglodytes
ENSPTIG00000019649	GPATCH1	91	89.189	ENSPANG00000012374	GPATCH1	96	88.954	Papio_anubis
ENSPTIG00000019649	GPATCH1	81	55.852	ENSPKIG00000020745	gpatch1	79	56.877	Paramormyrops_kingsleyae
ENSPTIG00000019649	GPATCH1	100	62.500	ENSPSIG00000013433	GPATCH1	100	62.818	Pelodiscus_sinensis
ENSPTIG00000019649	GPATCH1	100	83.369	ENSPEMG00000000636	Gpatch1	100	83.369	Peromyscus_maniculatus_bairdii
ENSPTIG00000019649	GPATCH1	91	75.469	ENSPCIG00000021003	GPATCH1	96	75.469	Phascolarctos_cinereus
ENSPTIG00000019649	GPATCH1	71	49.702	ENSPREG00000008264	gpatch1	97	45.210	Poecilia_reticulata
ENSPTIG00000019649	GPATCH1	100	86.281	ENSPPYG00000009824	GPATCH1	100	86.495	Pongo_abelii
ENSPTIG00000019649	GPATCH1	83	81.754	ENSPCAG00000005931	GPATCH1	93	82.669	Procavia_capensis
ENSPTIG00000019649	GPATCH1	93	82.624	ENSPCOG00000009674	GPATCH1	97	83.943	Propithecus_coquereli
ENSPTIG00000019649	GPATCH1	99	81.610	ENSPVAG00000017767	GPATCH1	92	88.976	Pteropus_vampyrus
ENSPTIG00000019649	GPATCH1	81	53.668	ENSPNYG00000018189	gpatch1	96	52.669	Pundamilia_nyererei
ENSPTIG00000019649	GPATCH1	91	52.313	ENSPNAG00000013187	gpatch1	92	52.550	Pygocentrus_nattereri
ENSPTIG00000019649	GPATCH1	100	83.691	ENSRNOG00000011584	Gpatch1	100	83.691	Rattus_norvegicus
ENSPTIG00000019649	GPATCH1	100	81.478	ENSRBIG00000034723	GPATCH1	100	77.623	Rhinopithecus_bieti
ENSPTIG00000019649	GPATCH1	100	89.068	ENSRROG00000024428	GPATCH1	100	89.282	Rhinopithecus_roxellana
ENSPTIG00000019649	GPATCH1	100	87.460	ENSSBOG00000034650	GPATCH1	100	88.317	Saimiri_boliviensis_boliviensis
ENSPTIG00000019649	GPATCH1	99	74.149	ENSSHAG00000016016	GPATCH1	99	74.468	Sarcophilus_harrisii
ENSPTIG00000019649	GPATCH1	81	54.707	ENSSFOG00015011535	gpatch1	89	52.436	Scleropages_formosus
ENSPTIG00000019649	GPATCH1	81	49.204	ENSSMAG00000002883	gpatch1	93	47.097	Scophthalmus_maximus
ENSPTIG00000019649	GPATCH1	81	52.428	ENSSDUG00000007444	gpatch1	90	49.501	Seriola_dumerili
ENSPTIG00000019649	GPATCH1	81	51.995	ENSSLDG00000002856	gpatch1	92	51.222	Seriola_lalandi_dorsalis
ENSPTIG00000019649	GPATCH1	72	85.905	ENSSARG00000004108	GPATCH1	72	85.757	Sorex_araneus
ENSPTIG00000019649	GPATCH1	91	91.284	ENSSSCG00000002865	GPATCH1	94	91.284	Sus_scrofa
ENSPTIG00000019649	GPATCH1	92	63.931	ENSTGUG00000009401	GPATCH1	91	63.820	Taeniopygia_guttata
ENSPTIG00000019649	GPATCH1	81	52.005	ENSTRUG00000005785	-	90	49.242	Takifugu_rubripes
ENSPTIG00000019649	GPATCH1	81	52.005	ENSTRUG00000025081	gpatch1	90	49.242	Takifugu_rubripes
ENSPTIG00000019649	GPATCH1	81	52.393	ENSTNIG00000002554	gpatch1	99	53.015	Tetraodon_nigroviridis
ENSPTIG00000019649	GPATCH1	64	78.935	ENSTBEG00000007750	-	84	78.935	Tupaia_belangeri
ENSPTIG00000019649	GPATCH1	91	82.746	ENSTTRG00000012221	GPATCH1	100	83.316	Tursiops_truncatus
ENSPTIG00000019649	GPATCH1	91	93.254	ENSUMAG00000014645	GPATCH1	100	92.840	Ursus_maritimus
ENSPTIG00000019649	GPATCH1	79	97.143	ENSVPAG00000010313	GPATCH1	86	97.283	Vicugna_pacos
ENSPTIG00000019649	GPATCH1	94	93.021	ENSVVUG00000016572	GPATCH1	91	92.949	Vulpes_vulpes
ENSPTIG00000019649	GPATCH1	99	50.629	ENSXETG00000018276	gpatch1	100	50.472	Xenopus_tropicalis