EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000019728 (Gene tree)
Gene ID: -
Gene Symbol: DDX54
Alias: -
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 22721 bases
Position: chrKE721725.1:5052468-5075188
Accession: 102953390
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000023200	DBP10CT	PF08147.12	4e-05	1	1
ENSPTIP00000023200	DEAD	PF00270.29	5.4e-41	1	1
ENSPTIP00000023190	DEAD	PF00270.29	8e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000027643	DDX54-201	2040	-	ENSPTIP00000023190	679 (aa)	-	-
ENSPTIT00000027653	DDX54-202	1914	XM_015536399	ENSPTIP00000023200	637 (aa)	XP_015391885	-

Gene Model

Click here to download ENSPTIG00000019728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000019728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000019728	DDX54	50	31.778	ENSPTIG00000019604	DDX47	79	33.639

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000019728	DDX54	86	73.913	ENSG00000123064	DDX54	81	94.643	Homo_sapiens
ENSPTIG00000019728	DDX54	78	84.896	ENSAPOG00000008602	ddx54	62	84.896	Acanthochromis_polyacanthus
ENSPTIG00000019728	DDX54	86	75.362	ENSAMEG00000008775	DDX54	73	75.362	Ailuropoda_melanoleuca
ENSPTIG00000019728	DDX54	84	86.979	ENSACIG00000019104	ddx54	61	86.979	Amphilophus_citrinellus
ENSPTIG00000019728	DDX54	78	84.817	ENSAOCG00000008449	ddx54	62	84.817	Amphiprion_ocellaris
ENSPTIG00000019728	DDX54	78	84.817	ENSAPEG00000014287	ddx54	62	84.817	Amphiprion_percula
ENSPTIG00000019728	DDX54	82	83.854	ENSATEG00000018529	ddx54	62	83.854	Anabas_testudineus
ENSPTIG00000019728	DDX54	86	66.344	ENSAPLG00000013191	DDX54	78	66.344	Anas_platyrhynchos
ENSPTIG00000019728	DDX54	88	67.813	ENSACAG00000004703	DDX54	78	67.813	Anolis_carolinensis
ENSPTIG00000019728	DDX54	87	69.953	ENSANAG00000032761	-	58	89.167	Aotus_nancymaae
ENSPTIG00000019728	DDX54	79	85.333	ENSANAG00000032241	-	57	87.179	Aotus_nancymaae
ENSPTIG00000019728	DDX54	83	86.010	ENSACLG00000013176	ddx54	63	86.458	Astatotilapia_calliptera
ENSPTIG00000019728	DDX54	89	62.162	ENSAMXG00000009189	ddx54	74	62.899	Astyanax_mexicanus
ENSPTIG00000019728	DDX54	82	96.907	ENSBTAG00000011930	DDX54	58	96.907	Bos_taurus
ENSPTIG00000019728	DDX54	80	49.487	WBGene00022378	Y94H6A.5	77	49.487	Caenorhabditis_elegans
ENSPTIG00000019728	DDX54	75	94.845	ENSCJAG00000010039	DDX54	64	73.430	Callithrix_jacchus
ENSPTIG00000019728	DDX54	50	93.220	ENSCAFG00000009029	DDX54	61	93.220	Canis_familiaris
ENSPTIG00000019728	DDX54	86	74.638	ENSCAFG00020017643	DDX54	74	74.638	Canis_lupus_dingo
ENSPTIG00000019728	DDX54	82	91.667	ENSCHIG00000026798	DDX54	61	91.667	Capra_hircus
ENSPTIG00000019728	DDX54	87	74.877	ENSTSYG00000007898	DDX54	73	74.876	Carlito_syrichta
ENSPTIG00000019728	DDX54	79	95.312	ENSCAPG00000001482	DDX54	61	95.312	Cavia_aperea
ENSPTIG00000019728	DDX54	81	94.330	ENSCPOG00000020649	DDX54	60	94.330	Cavia_porcellus
ENSPTIG00000019728	DDX54	86	73.671	ENSCCAG00000022625	DDX54	73	73.671	Cebus_capucinus
ENSPTIG00000019728	DDX54	84	73.913	ENSCATG00000041943	DDX54	71	73.913	Cercocebus_atys
ENSPTIG00000019728	DDX54	81	92.188	ENSCLAG00000010748	DDX54	61	92.188	Chinchilla_lanigera
ENSPTIG00000019728	DDX54	79	93.583	ENSCSAG00000002432	DDX54	69	71.814	Chlorocebus_sabaeus
ENSPTIG00000019728	DDX54	50	81.034	ENSCPBG00000017982	DDX54	63	55.159	Chrysemys_picta_bellii
ENSPTIG00000019728	DDX54	78	52.817	ENSCING00000004789	-	76	51.887	Ciona_intestinalis
ENSPTIG00000019728	DDX54	60	73.034	ENSCSAVG00000008916	-	100	54.154	Ciona_savignyi
ENSPTIG00000019728	DDX54	93	72.540	ENSCANG00000020637	DDX54	75	82.961	Colobus_angolensis_palliatus
ENSPTIG00000019728	DDX54	86	73.913	ENSCGRG00001014803	Ddx54	73	73.913	Cricetulus_griseus_chok1gshd
ENSPTIG00000019728	DDX54	86	73.850	ENSCGRG00000002827	Ddx54	73	73.850	Cricetulus_griseus_crigri
ENSPTIG00000019728	DDX54	74	82.632	ENSCSEG00000016462	ddx54	62	82.632	Cynoglossus_semilaevis
ENSPTIG00000019728	DDX54	82	83.854	ENSCVAG00000022404	ddx54	62	83.854	Cyprinodon_variegatus
ENSPTIG00000019728	DDX54	81	86.316	ENSDARG00000105286	ddx54	62	86.316	Danio_rerio
ENSPTIG00000019728	DDX54	87	71.807	ENSDNOG00000032913	DDX54	74	71.807	Dasypus_novemcinctus
ENSPTIG00000019728	DDX54	51	89.167	ENSDORG00000003399	Ddx54	69	62.338	Dipodomys_ordii
ENSPTIG00000019728	DDX54	55	56.479	ENSEBUG00000008886	ddx54	57	56.724	Eptatretus_burgeri
ENSPTIG00000019728	DDX54	68	92.500	ENSEASG00005009501	DDX54	53	92.500	Equus_asinus_asinus
ENSPTIG00000019728	DDX54	86	74.396	ENSECAG00000012890	DDX54	79	74.396	Equus_caballus
ENSPTIG00000019728	DDX54	89	63.196	ENSELUG00000013533	ddx54	76	63.285	Esox_lucius
ENSPTIG00000019728	DDX54	87	77.570	ENSFCAG00000027806	DDX54	73	78.502	Felis_catus
ENSPTIG00000019728	DDX54	82	67.526	ENSFALG00000007737	DDX54	77	67.526	Ficedula_albicollis
ENSPTIG00000019728	DDX54	94	64.337	ENSFDAG00000019953	DDX54	91	61.826	Fukomys_damarensis
ENSPTIG00000019728	DDX54	88	60.934	ENSFHEG00000018425	ddx54	62	83.854	Fundulus_heteroclitus
ENSPTIG00000019728	DDX54	77	83.770	ENSGMOG00000011746	ddx54	64	83.770	Gadus_morhua
ENSPTIG00000019728	DDX54	88	63.971	ENSGALG00000007490	DDX54	75	63.971	Gallus_gallus
ENSPTIG00000019728	DDX54	85	63.457	ENSGAFG00000010336	ddx54	77	63.457	Gambusia_affinis
ENSPTIG00000019728	DDX54	78	83.854	ENSGACG00000016793	ddx54	76	60.185	Gasterosteus_aculeatus
ENSPTIG00000019728	DDX54	89	66.262	ENSGAGG00000022803	DDX54	79	68.608	Gopherus_agassizii
ENSPTIG00000019728	DDX54	86	73.913	ENSGGOG00000010414	DDX54	73	73.913	Gorilla_gorilla
ENSPTIG00000019728	DDX54	87	71.913	ENSHGLG00000014411	DDX54	73	71.913	Heterocephalus_glaber_female
ENSPTIG00000019728	DDX54	87	72.155	ENSHGLG00100018511	DDX54	77	67.253	Heterocephalus_glaber_male
ENSPTIG00000019728	DDX54	83	82.292	ENSHCOG00000019287	ddx54	63	82.292	Hippocampus_comes
ENSPTIG00000019728	DDX54	88	68.120	ENSIPUG00000015556	Ddx54	72	68.407	Ictalurus_punctatus
ENSPTIG00000019728	DDX54	70	90.909	ENSSTOG00000004068	DDX54	55	93.701	Ictidomys_tridecemlineatus
ENSPTIG00000019728	DDX54	86	72.816	ENSJJAG00000015712	Ddx54	73	72.816	Jaculus_jaculus
ENSPTIG00000019728	DDX54	83	83.158	ENSKMAG00000017520	ddx54	64	83.158	Kryptolebias_marmoratus
ENSPTIG00000019728	DDX54	77	82.632	ENSLBEG00000019480	ddx54	59	82.632	Labrus_bergylta
ENSPTIG00000019728	DDX54	82	65.000	ENSLACG00000008944	DDX54	70	65.000	Latimeria_chalumnae
ENSPTIG00000019728	DDX54	81	85.340	ENSLOCG00000008485	ddx54	62	85.340	Lepisosteus_oculatus
ENSPTIG00000019728	DDX54	79	94.000	ENSLAFG00000027782	DDX54	65	94.000	Loxodonta_africana
ENSPTIG00000019728	DDX54	86	73.913	ENSMFAG00000043636	DDX54	73	73.913	Macaca_fascicularis
ENSPTIG00000019728	DDX54	86	73.671	ENSMMUG00000021795	DDX54	73	73.671	Macaca_mulatta
ENSPTIG00000019728	DDX54	80	94.845	ENSMNEG00000043605	DDX54	72	75.181	Macaca_nemestrina
ENSPTIG00000019728	DDX54	86	74.752	ENSMLEG00000038981	DDX54	72	74.752	Mandrillus_leucophaeus
ENSPTIG00000019728	DDX54	83	85.417	ENSMAMG00000012784	ddx54	63	85.417	Mastacembelus_armatus
ENSPTIG00000019728	DDX54	91	86.010	ENSMZEG00005018773	ddx54	65	86.458	Maylandia_zebra
ENSPTIG00000019728	DDX54	85	66.093	ENSMGAG00000009183	DDX54	77	66.093	Meleagris_gallopavo
ENSPTIG00000019728	DDX54	86	74.155	ENSMAUG00000011051	Ddx54	73	74.155	Mesocricetus_auratus
ENSPTIG00000019728	DDX54	86	73.430	ENSMICG00000012217	DDX54	75	73.430	Microcebus_murinus
ENSPTIG00000019728	DDX54	86	72.464	ENSMOCG00000010835	Ddx54	73	72.464	Microtus_ochrogaster
ENSPTIG00000019728	DDX54	79	81.771	ENSMMOG00000009634	ddx54	64	81.771	Mola_mola
ENSPTIG00000019728	DDX54	85	67.718	ENSMODG00000003413	DDX54	63	89.947	Monodelphis_domestica
ENSPTIG00000019728	DDX54	83	84.293	ENSMALG00000022098	ddx54	63	84.293	Monopterus_albus
ENSPTIG00000019728	DDX54	86	75.121	MGP_CAROLIEiJ_G0027665	Ddx54	73	74.396	Mus_caroli
ENSPTIG00000019728	DDX54	86	73.850	ENSMUSG00000029599	Ddx54	73	73.850	Mus_musculus
ENSPTIG00000019728	DDX54	86	74.638	MGP_PahariEiJ_G0024247	Ddx54	73	73.913	Mus_pahari
ENSPTIG00000019728	DDX54	86	74.092	MGP_SPRETEiJ_G0028665	Ddx54	73	73.366	Mus_spretus
ENSPTIG00000019728	DDX54	81	95.361	ENSMPUG00000002574	DDX54	61	95.361	Mustela_putorius_furo
ENSPTIG00000019728	DDX54	87	74.155	ENSNGAG00000021313	Ddx54	73	73.430	Nannospalax_galili
ENSPTIG00000019728	DDX54	65	86.010	ENSNBRG00000005588	ddx54	52	86.458	Neolamprologus_brichardi
ENSPTIG00000019728	DDX54	86	73.913	ENSNLEG00000000162	DDX54	73	73.913	Nomascus_leucogenys
ENSPTIG00000019728	DDX54	70	67.838	ENSMEUG00000015392	DDX54	74	67.838	Notamacropus_eugenii
ENSPTIG00000019728	DDX54	69	64.784	ENSOPRG00000012000	DDX54	60	64.784	Ochotona_princeps
ENSPTIG00000019728	DDX54	89	83.505	ENSODEG00000014863	DDX54	60	83.505	Octodon_degus
ENSPTIG00000019728	DDX54	87	70.776	ENSOCUG00000008932	DDX54	74	70.290	Oryctolagus_cuniculus
ENSPTIG00000019728	DDX54	82	83.938	ENSORLG00000007385	ddx54	62	84.375	Oryzias_latipes
ENSPTIG00000019728	DDX54	82	84.456	ENSORLG00020000858	ddx54	62	84.896	Oryzias_latipes_hni
ENSPTIG00000019728	DDX54	82	84.456	ENSORLG00015006956	ddx54	62	84.896	Oryzias_latipes_hsok
ENSPTIG00000019728	DDX54	77	84.974	ENSOMEG00000003663	ddx54	62	85.417	Oryzias_melastigma
ENSPTIG00000019728	DDX54	86	74.638	ENSOGAG00000004210	DDX54	74	74.638	Otolemur_garnettii
ENSPTIG00000019728	DDX54	87	75.604	ENSOARG00000008363	DDX54	74	75.604	Ovis_aries
ENSPTIG00000019728	DDX54	86	73.913	ENSPPAG00000042178	DDX54	72	73.188	Pan_paniscus
ENSPTIG00000019728	DDX54	87	78.404	ENSPPRG00000005223	DDX54	73	78.832	Panthera_pardus
ENSPTIG00000019728	DDX54	86	73.913	ENSPTRG00000005483	DDX54	73	73.188	Pan_troglodytes
ENSPTIG00000019728	DDX54	86	74.155	ENSPANG00000008883	DDX54	73	74.155	Papio_anubis
ENSPTIG00000019728	DDX54	89	62.745	ENSPKIG00000018272	ddx54	73	64.461	Paramormyrops_kingsleyae
ENSPTIG00000019728	DDX54	52	66.237	ENSPSIG00000005055	DDX54	59	88.095	Pelodiscus_sinensis
ENSPTIG00000019728	DDX54	89	62.808	ENSPMGG00000010988	ddx54	81	62.808	Periophthalmus_magnuspinnatus
ENSPTIG00000019728	DDX54	86	74.334	ENSPEMG00000016701	Ddx54	73	74.334	Peromyscus_maniculatus_bairdii
ENSPTIG00000019728	DDX54	53	61.323	ENSPMAG00000004337	ddx54	99	61.323	Petromyzon_marinus
ENSPTIG00000019728	DDX54	92	62.927	ENSPFOG00000019822	ddx54	77	62.927	Poecilia_formosa
ENSPTIG00000019728	DDX54	88	62.899	ENSPLAG00000004530	ddx54	74	62.899	Poecilia_latipinna
ENSPTIG00000019728	DDX54	88	62.654	ENSPMEG00000010803	ddx54	74	62.654	Poecilia_mexicana
ENSPTIG00000019728	DDX54	92	62.408	ENSPREG00000014372	ddx54	78	62.222	Poecilia_reticulata
ENSPTIG00000019728	DDX54	87	74.396	ENSPPYG00000004984	DDX54	73	74.396	Pongo_abelii
ENSPTIG00000019728	DDX54	80	95.361	ENSPCAG00000008462	DDX54	61	95.833	Procavia_capensis
ENSPTIG00000019728	DDX54	86	74.155	ENSPCOG00000006050	DDX54	73	74.155	Propithecus_coquereli
ENSPTIG00000019728	DDX54	80	93.966	ENSPVAG00000017347	DDX54	61	93.966	Pteropus_vampyrus
ENSPTIG00000019728	DDX54	87	53.102	ENSPNAG00000014459	ddx54	70	65.337	Pygocentrus_nattereri
ENSPTIG00000019728	DDX54	86	74.334	ENSRNOG00000001377	Ddx54	70	74.334	Rattus_norvegicus
ENSPTIG00000019728	DDX54	87	73.430	ENSRBIG00000032535	DDX54	73	73.430	Rhinopithecus_bieti
ENSPTIG00000019728	DDX54	87	71.608	ENSRROG00000029557	DDX54	72	71.859	Rhinopithecus_roxellana
ENSPTIG00000019728	DDX54	86	73.430	ENSSBOG00000028194	DDX54	73	73.430	Saimiri_boliviensis_boliviensis
ENSPTIG00000019728	DDX54	79	68.333	ENSSHAG00000015646	DDX54	73	68.333	Sarcophilus_harrisii
ENSPTIG00000019728	DDX54	82	85.492	ENSSFOG00015014981	ddx54	62	85.492	Scleropages_formosus
ENSPTIG00000019728	DDX54	83	60.723	ENSSMAG00000003210	ddx54	78	61.823	Scophthalmus_maximus
ENSPTIG00000019728	DDX54	86	60.911	ENSSDUG00000004474	ddx54	76	61.836	Seriola_dumerili
ENSPTIG00000019728	DDX54	86	60.817	ENSSLDG00000010380	ddx54	76	61.594	Seriola_lalandi_dorsalis
ENSPTIG00000019728	DDX54	86	67.322	ENSSPUG00000014141	DDX54	74	67.322	Sphenodon_punctatus
ENSPTIG00000019728	DDX54	77	76.316	ENSSPAG00000022918	ddx54	65	76.316	Stegastes_partitus
ENSPTIG00000019728	DDX54	83	95.361	ENSSSCG00000009876	DDX54	62	95.361	Sus_scrofa
ENSPTIG00000019728	DDX54	84	65.915	ENSTGUG00000009126	DDX54	78	65.915	Taeniopygia_guttata
ENSPTIG00000019728	DDX54	84	83.938	ENSTRUG00000014939	ddx54	63	84.375	Takifugu_rubripes
ENSPTIG00000019728	DDX54	83	85.641	ENSTNIG00000009037	ddx54	75	62.621	Tetraodon_nigroviridis
ENSPTIG00000019728	DDX54	77	87.755	ENSTBEG00000003783	DDX54	68	87.234	Tupaia_belangeri
ENSPTIG00000019728	DDX54	86	71.226	ENSTTRG00000016678	DDX54	74	69.082	Tursiops_truncatus
ENSPTIG00000019728	DDX54	87	93.103	ENSUAMG00000028387	DDX54	81	73.924	Ursus_americanus
ENSPTIG00000019728	DDX54	85	96.891	ENSUMAG00000010245	DDX54	79	96.891	Ursus_maritimus
ENSPTIG00000019728	DDX54	86	74.879	ENSVVUG00000010212	DDX54	74	74.879	Vulpes_vulpes
ENSPTIG00000019728	DDX54	88	64.354	ENSXETG00000016410	ddx54	78	64.354	Xenopus_tropicalis
ENSPTIG00000019728	DDX54	88	62.899	ENSXCOG00000002909	ddx54	75	63.210	Xiphophorus_couchianus
ENSPTIG00000019728	DDX54	88	62.899	ENSXMAG00000005312	ddx54	75	63.210	Xiphophorus_maculatus