EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000020652 (Gene tree)
Gene ID: 102967867
Gene Symbol: RIF1
Alias: -
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 67418 bases
Position: chrKE721711.1:11080202-11147619
Accession: 102967867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000024653	Rif1_N	PF12231.8	2.2e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000029138	RIF1-201	7443	XM_007078532	ENSPTIP00000024653	2480 (aa)	XP_007078594	-

Gene Model

Click here to download ENSPTIG00000020652's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000020652's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000020652	RIF1	100	79.485	ENSG00000080345	RIF1	97	89.781	Homo_sapiens
ENSPTIG00000020652	RIF1	51	48.154	ENSAPOG00000011073	rif1	50	48.154	Acanthochromis_polyacanthus
ENSPTIG00000020652	RIF1	99	88.437	ENSAMEG00000008461	RIF1	100	88.437	Ailuropoda_melanoleuca
ENSPTIG00000020652	RIF1	66	49.268	ENSACIG00000017765	rif1	73	49.268	Amphilophus_citrinellus
ENSPTIG00000020652	RIF1	65	47.802	ENSAOCG00000017231	rif1	66	47.731	Amphiprion_ocellaris
ENSPTIG00000020652	RIF1	61	55.627	ENSAPEG00000013228	rif1	65	55.627	Amphiprion_percula
ENSPTIG00000020652	RIF1	67	47.788	ENSATEG00000022887	rif1	69	47.476	Anabas_testudineus
ENSPTIG00000020652	RIF1	84	65.689	ENSAPLG00000007092	RIF1	95	65.689	Anas_platyrhynchos
ENSPTIG00000020652	RIF1	83	56.447	ENSACAG00000003714	RIF1	99	48.678	Anolis_carolinensis
ENSPTIG00000020652	RIF1	100	78.399	ENSANAG00000024840	RIF1	100	78.238	Aotus_nancymaae
ENSPTIG00000020652	RIF1	50	51.456	ENSAMXG00000010910	rif1	52	51.368	Astyanax_mexicanus
ENSPTIG00000020652	RIF1	94	81.760	ENSBTAG00000021020	RIF1	99	82.511	Bos_taurus
ENSPTIG00000020652	RIF1	100	77.796	ENSCJAG00000003138	RIF1	100	77.595	Callithrix_jacchus
ENSPTIG00000020652	RIF1	100	86.645	ENSCAFG00000005670	RIF1	97	86.645	Canis_familiaris
ENSPTIG00000020652	RIF1	100	85.588	ENSCAFG00020016401	RIF1	100	85.588	Canis_lupus_dingo
ENSPTIG00000020652	RIF1	100	81.643	ENSCHIG00000020327	RIF1	100	81.643	Capra_hircus
ENSPTIG00000020652	RIF1	99	77.022	ENSTSYG00000008861	RIF1	100	77.022	Carlito_syrichta
ENSPTIG00000020652	RIF1	79	73.843	ENSCAPG00000008957	RIF1	95	73.843	Cavia_aperea
ENSPTIG00000020652	RIF1	99	69.811	ENSCPOG00000037898	RIF1	99	69.972	Cavia_porcellus
ENSPTIG00000020652	RIF1	100	77.273	ENSCCAG00000024760	RIF1	100	77.112	Cebus_capucinus
ENSPTIG00000020652	RIF1	100	79.606	ENSCATG00000033353	RIF1	100	79.485	Cercocebus_atys
ENSPTIG00000020652	RIF1	96	73.289	ENSCLAG00000001517	RIF1	99	73.247	Chinchilla_lanigera
ENSPTIG00000020652	RIF1	100	79.726	ENSCSAG00000016089	RIF1	100	79.606	Chlorocebus_sabaeus
ENSPTIG00000020652	RIF1	97	74.348	ENSCHOG00000007187	RIF1	97	74.348	Choloepus_hoffmanni
ENSPTIG00000020652	RIF1	86	72.107	ENSCPBG00000025885	RIF1	94	72.700	Chrysemys_picta_bellii
ENSPTIG00000020652	RIF1	100	78.569	ENSCANG00000028962	RIF1	100	79.067	Colobus_angolensis_palliatus
ENSPTIG00000020652	RIF1	99	69.274	ENSCGRG00001024589	Rif1	100	69.154	Cricetulus_griseus_chok1gshd
ENSPTIG00000020652	RIF1	99	70.464	ENSCGRG00000010713	Rif1	100	70.342	Cricetulus_griseus_crigri
ENSPTIG00000020652	RIF1	62	54.086	ENSCSEG00000003945	rif1	67	54.086	Cynoglossus_semilaevis
ENSPTIG00000020652	RIF1	64	48.125	ENSCVAG00000022479	rif1	68	47.819	Cyprinodon_variegatus
ENSPTIG00000020652	RIF1	99	76.506	ENSDNOG00000011194	RIF1	97	76.506	Dasypus_novemcinctus
ENSPTIG00000020652	RIF1	94	72.934	ENSETEG00000012421	RIF1	92	72.479	Echinops_telfairi
ENSPTIG00000020652	RIF1	95	94.667	ENSEASG00005023434	RIF1	99	95.302	Equus_asinus_asinus
ENSPTIG00000020652	RIF1	97	93.051	ENSECAG00000012679	RIF1	100	93.051	Equus_caballus
ENSPTIG00000020652	RIF1	62	50.439	ENSELUG00000006826	rif1	56	50.394	Esox_lucius
ENSPTIG00000020652	RIF1	100	98.911	ENSFCAG00000029742	RIF1	100	98.911	Felis_catus
ENSPTIG00000020652	RIF1	76	64.401	ENSFALG00000013874	RIF1	89	64.725	Ficedula_albicollis
ENSPTIG00000020652	RIF1	99	73.925	ENSFDAG00000006538	RIF1	99	73.913	Fukomys_damarensis
ENSPTIG00000020652	RIF1	62	50.243	ENSFHEG00000013721	rif1	66	49.329	Fundulus_heteroclitus
ENSPTIG00000020652	RIF1	53	49.630	ENSGMOG00000003517	rif1	81	49.797	Gadus_morhua
ENSPTIG00000020652	RIF1	81	59.296	ENSGALG00000012484	RIF1	94	59.398	Gallus_gallus
ENSPTIG00000020652	RIF1	62	54.352	ENSGAFG00000017196	rif1	69	54.389	Gambusia_affinis
ENSPTIG00000020652	RIF1	59	55.102	ENSGACG00000008579	rif1	66	54.618	Gasterosteus_aculeatus
ENSPTIG00000020652	RIF1	86	71.772	ENSGAGG00000012595	RIF1	95	72.372	Gopherus_agassizii
ENSPTIG00000020652	RIF1	90	89.700	ENSGGOG00000040178	RIF1	96	89.700	Gorilla_gorilla
ENSPTIG00000020652	RIF1	60	56.067	ENSHBUG00000007125	rif1	66	56.067	Haplochromis_burtoni
ENSPTIG00000020652	RIF1	95	73.664	ENSHGLG00100009807	RIF1	99	73.865	Heterocephalus_glaber_male
ENSPTIG00000020652	RIF1	65	49.232	ENSHCOG00000015943	rif1	62	49.151	Hippocampus_comes
ENSPTIG00000020652	RIF1	100	77.351	ENSSTOG00000020712	RIF1	100	77.462	Ictidomys_tridecemlineatus
ENSPTIG00000020652	RIF1	99	68.650	ENSJJAG00000023000	Rif1	100	68.690	Jaculus_jaculus
ENSPTIG00000020652	RIF1	64	49.451	ENSKMAG00000002852	rif1	67	49.451	Kryptolebias_marmoratus
ENSPTIG00000020652	RIF1	63	50.591	ENSLBEG00000023196	rif1	60	50.591	Labrus_bergylta
ENSPTIG00000020652	RIF1	85	63.018	ENSLACG00000005425	RIF1	89	63.018	Latimeria_chalumnae
ENSPTIG00000020652	RIF1	62	54.712	ENSLOCG00000002657	rif1	82	52.769	Lepisosteus_oculatus
ENSPTIG00000020652	RIF1	99	77.013	ENSLAFG00000009796	RIF1	100	77.013	Loxodonta_africana
ENSPTIG00000020652	RIF1	100	79.566	ENSMFAG00000032233	RIF1	100	79.445	Macaca_fascicularis
ENSPTIG00000020652	RIF1	100	79.606	ENSMMUG00000008611	RIF1	100	79.485	Macaca_mulatta
ENSPTIG00000020652	RIF1	100	79.646	ENSMNEG00000031616	RIF1	100	79.525	Macaca_nemestrina
ENSPTIG00000020652	RIF1	100	79.646	ENSMLEG00000042945	RIF1	100	79.525	Mandrillus_leucophaeus
ENSPTIG00000020652	RIF1	75	48.758	ENSMAMG00000001745	rif1	65	48.821	Mastacembelus_armatus
ENSPTIG00000020652	RIF1	64	50.624	ENSMZEG00005020920	rif1	70	50.546	Maylandia_zebra
ENSPTIG00000020652	RIF1	83	61.648	ENSMGAG00000012732	RIF1	91	61.756	Meleagris_gallopavo
ENSPTIG00000020652	RIF1	95	86.351	ENSMAUG00000013158	Rif1	99	86.351	Mesocricetus_auratus
ENSPTIG00000020652	RIF1	100	81.489	ENSMICG00000046127	RIF1	100	81.489	Microcebus_murinus
ENSPTIG00000020652	RIF1	99	68.810	ENSMOCG00000009381	Rif1	100	68.387	Microtus_ochrogaster
ENSPTIG00000020652	RIF1	65	49.719	ENSMMOG00000006519	rif1	67	48.957	Mola_mola
ENSPTIG00000020652	RIF1	100	59.674	ENSMODG00000003703	RIF1	100	59.674	Monodelphis_domestica
ENSPTIG00000020652	RIF1	58	52.269	ENSMALG00000016759	rif1	66	52.936	Monopterus_albus
ENSPTIG00000020652	RIF1	99	67.645	MGP_CAROLIEiJ_G0023555	Rif1	100	67.564	Mus_caroli
ENSPTIG00000020652	RIF1	99	68.337	ENSMUSG00000036202	Rif1	100	68.229	Mus_musculus
ENSPTIG00000020652	RIF1	99	67.605	MGP_PahariEiJ_G0025006	Rif1	100	67.404	Mus_pahari
ENSPTIG00000020652	RIF1	99	68.074	MGP_SPRETEiJ_G0024476	Rif1	100	67.966	Mus_spretus
ENSPTIG00000020652	RIF1	100	86.433	ENSMPUG00000000371	RIF1	100	86.433	Mustela_putorius_furo
ENSPTIG00000020652	RIF1	90	79.785	ENSMLUG00000003376	RIF1	100	79.785	Myotis_lucifugus
ENSPTIG00000020652	RIF1	100	71.778	ENSNGAG00000009268	Rif1	100	71.618	Nannospalax_galili
ENSPTIG00000020652	RIF1	64	49.079	ENSNBRG00000014257	rif1	69	49.653	Neolamprologus_brichardi
ENSPTIG00000020652	RIF1	100	78.014	ENSNLEG00000010955	RIF1	100	77.974	Nomascus_leucogenys
ENSPTIG00000020652	RIF1	78	79.464	ENSMEUG00000007601	-	85	79.464	Notamacropus_eugenii
ENSPTIG00000020652	RIF1	99	70.550	ENSODEG00000003950	RIF1	99	71.004	Octodon_degus
ENSPTIG00000020652	RIF1	66	50.313	ENSONIG00000013657	rif1	63	50.232	Oreochromis_niloticus
ENSPTIG00000020652	RIF1	79	75.235	ENSOANG00000006078	-	83	75.235	Ornithorhynchus_anatinus
ENSPTIG00000020652	RIF1	100	76.963	ENSOCUG00000017435	RIF1	100	76.843	Oryctolagus_cuniculus
ENSPTIG00000020652	RIF1	62	48.166	ENSORLG00020001302	rif1	67	47.975	Oryzias_latipes_hni
ENSPTIG00000020652	RIF1	62	47.895	ENSORLG00015000009	rif1	67	48.292	Oryzias_latipes_hsok
ENSPTIG00000020652	RIF1	61	49.157	ENSOMEG00000021513	rif1	67	48.685	Oryzias_melastigma
ENSPTIG00000020652	RIF1	99	77.827	ENSOGAG00000006141	RIF1	99	77.827	Otolemur_garnettii
ENSPTIG00000020652	RIF1	100	81.811	ENSOARG00000008930	RIF1	100	81.811	Ovis_aries
ENSPTIG00000020652	RIF1	100	79.485	ENSPPAG00000023754	RIF1	100	79.364	Pan_paniscus
ENSPTIG00000020652	RIF1	100	99.718	ENSPPRG00000003618	RIF1	100	99.718	Panthera_pardus
ENSPTIG00000020652	RIF1	100	79.445	ENSPTRG00000012534	RIF1	100	79.324	Pan_troglodytes
ENSPTIG00000020652	RIF1	100	79.566	ENSPANG00000008525	RIF1	100	79.445	Papio_anubis
ENSPTIG00000020652	RIF1	74	47.484	ENSPKIG00000004267	rif1	72	52.170	Paramormyrops_kingsleyae
ENSPTIG00000020652	RIF1	65	46.221	ENSPMGG00000016141	rif1	79	45.103	Periophthalmus_magnuspinnatus
ENSPTIG00000020652	RIF1	99	69.988	ENSPEMG00000000446	Rif1	99	69.500	Peromyscus_maniculatus_bairdii
ENSPTIG00000020652	RIF1	99	58.696	ENSPCIG00000009185	RIF1	99	59.881	Phascolarctos_cinereus
ENSPTIG00000020652	RIF1	58	51.941	ENSPFOG00000000554	-	67	52.078	Poecilia_formosa
ENSPTIG00000020652	RIF1	65	51.479	ENSPFOG00000017804	rif1	69	51.677	Poecilia_formosa
ENSPTIG00000020652	RIF1	66	51.028	ENSPLAG00000017945	rif1	72	50.870	Poecilia_latipinna
ENSPTIG00000020652	RIF1	55	50.343	ENSPMEG00000006897	-	65	50.490	Poecilia_mexicana
ENSPTIG00000020652	RIF1	66	50.156	ENSPREG00000018052	rif1	68	54.356	Poecilia_reticulata
ENSPTIG00000020652	RIF1	100	79.485	ENSPPYG00000012846	RIF1	100	79.364	Pongo_abelii
ENSPTIG00000020652	RIF1	83	83.495	ENSPCAG00000009032	RIF1	83	83.495	Procavia_capensis
ENSPTIG00000020652	RIF1	100	81.127	ENSPCOG00000027888	RIF1	100	81.127	Propithecus_coquereli
ENSPTIG00000020652	RIF1	93	90.061	ENSPVAG00000014276	RIF1	95	90.061	Pteropus_vampyrus
ENSPTIG00000020652	RIF1	64	48.782	ENSPNYG00000012940	rif1	69	48.704	Pundamilia_nyererei
ENSPTIG00000020652	RIF1	62	52.516	ENSPNAG00000016685	rif1	64	52.516	Pygocentrus_nattereri
ENSPTIG00000020652	RIF1	99	67.522	ENSRNOG00000054901	Rif1	100	67.455	Rattus_norvegicus
ENSPTIG00000020652	RIF1	100	78.600	ENSRBIG00000003704	RIF1	100	78.520	Rhinopithecus_bieti
ENSPTIG00000020652	RIF1	100	79.606	ENSRROG00000028206	RIF1	100	79.525	Rhinopithecus_roxellana
ENSPTIG00000020652	RIF1	100	74.387	ENSSBOG00000029530	RIF1	100	74.266	Saimiri_boliviensis_boliviensis
ENSPTIG00000020652	RIF1	65	52.535	ENSSFOG00015021539	rif1	73	51.504	Scleropages_formosus
ENSPTIG00000020652	RIF1	64	50.725	ENSSDUG00000015632	rif1	70	49.922	Seriola_dumerili
ENSPTIG00000020652	RIF1	61	86.486	ENSSARG00000007161	-	62	81.695	Sorex_araneus
ENSPTIG00000020652	RIF1	85	62.530	ENSSPUG00000003062	RIF1	93	62.530	Sphenodon_punctatus
ENSPTIG00000020652	RIF1	50	57.260	ENSSPAG00000018359	rif1	76	57.260	Stegastes_partitus
ENSPTIG00000020652	RIF1	100	82.528	ENSSSCG00000016395	RIF1	100	82.528	Sus_scrofa
ENSPTIG00000020652	RIF1	63	49.921	ENSTRUG00000015808	rif1	70	49.449	Takifugu_rubripes
ENSPTIG00000020652	RIF1	66	47.939	ENSTNIG00000011538	rif1	72	47.786	Tetraodon_nigroviridis
ENSPTIG00000020652	RIF1	83	89.241	ENSTBEG00000016082	RIF1	82	89.241	Tupaia_belangeri
ENSPTIG00000020652	RIF1	100	84.018	ENSTTRG00000011190	RIF1	100	84.018	Tursiops_truncatus
ENSPTIG00000020652	RIF1	86	94.473	ENSUAMG00000026385	RIF1	97	94.473	Ursus_americanus
ENSPTIG00000020652	RIF1	96	94.439	ENSUMAG00000000337	RIF1	99	94.439	Ursus_maritimus
ENSPTIG00000020652	RIF1	100	80.870	ENSVPAG00000002162	RIF1	100	80.789	Vicugna_pacos
ENSPTIG00000020652	RIF1	100	85.956	ENSVVUG00000011293	RIF1	100	85.875	Vulpes_vulpes
ENSPTIG00000020652	RIF1	66	47.853	ENSXMAG00000000506	rif1	67	47.853	Xiphophorus_maculatus