EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000020959 (Gene tree)
Gene ID: 102950815
Gene Symbol: SMARCA5
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 37697 bases
Position: chrKE721976.1:4382985-4420681
Accession: 102950815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000025061	ResIII	PF04851.15	6.5e-11	1	1
ENSPTIP00000025061	DEAD	PF00270.29	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000029569	SMARCA5-201	4316	XM_015541904	ENSPTIP00000025061	1040 (aa)	XP_015397390	-

Gene Model

Click here to download ENSPTIG00000020959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000020959's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000020959	SMARCA5	94	83.968	ENSPTIG00000000915	SMARCA1	96	83.968

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000020959	SMARCA5	97	99.109	ENSG00000153147	SMARCA5	96	99.109	Homo_sapiens
ENSPTIG00000020959	SMARCA5	97	100.000	ENSAMEG00000009585	SMARCA5	96	100.000	Ailuropoda_melanoleuca
ENSPTIG00000020959	SMARCA5	93	96.920	ENSAPLG00000009206	SMARCA5	100	96.920	Anas_platyrhynchos
ENSPTIG00000020959	SMARCA5	97	95.450	ENSACAG00000003038	SMARCA5	98	95.450	Anolis_carolinensis
ENSPTIG00000020959	SMARCA5	97	99.010	ENSANAG00000019345	SMARCA5	99	99.297	Aotus_nancymaae
ENSPTIG00000020959	SMARCA5	97	99.307	ENSBTAG00000003399	SMARCA5	96	99.307	Bos_taurus
ENSPTIG00000020959	SMARCA5	97	99.109	ENSCJAG00000002735	SMARCA5	96	99.109	Callithrix_jacchus
ENSPTIG00000020959	SMARCA5	97	99.802	ENSCAFG00000007525	SMARCA5	96	99.802	Canis_familiaris
ENSPTIG00000020959	SMARCA5	95	99.697	ENSCAFG00020025641	SMARCA5	95	99.697	Canis_lupus_dingo
ENSPTIG00000020959	SMARCA5	97	97.921	ENSCHIG00000016375	-	97	97.921	Capra_hircus
ENSPTIG00000020959	SMARCA5	97	99.703	ENSCHIG00000013730	-	96	99.703	Capra_hircus
ENSPTIG00000020959	SMARCA5	97	98.808	ENSTSYG00000009954	SMARCA5	99	99.799	Carlito_syrichta
ENSPTIG00000020959	SMARCA5	93	99.174	ENSCAPG00000013747	SMARCA5	95	99.174	Cavia_aperea
ENSPTIG00000020959	SMARCA5	97	98.910	ENSCPOG00000002259	SMARCA5	96	98.910	Cavia_porcellus
ENSPTIG00000020959	SMARCA5	97	99.109	ENSCCAG00000027215	SMARCA5	99	99.398	Cebus_capucinus
ENSPTIG00000020959	SMARCA5	97	99.208	ENSCATG00000044917	SMARCA5	96	99.208	Cercocebus_atys
ENSPTIG00000020959	SMARCA5	97	98.121	ENSCLAG00000006153	SMARCA5	100	99.496	Chinchilla_lanigera
ENSPTIG00000020959	SMARCA5	93	99.587	ENSCSAG00000003448	SMARCA5	100	99.587	Chlorocebus_sabaeus
ENSPTIG00000020959	SMARCA5	88	98.519	ENSCHOG00000011724	SMARCA5	86	100.000	Choloepus_hoffmanni
ENSPTIG00000020959	SMARCA5	97	97.324	ENSCPBG00000027535	SMARCA5	97	97.324	Chrysemys_picta_bellii
ENSPTIG00000020959	SMARCA5	97	99.109	ENSCANG00000041629	SMARCA5	96	99.109	Colobus_angolensis_palliatus
ENSPTIG00000020959	SMARCA5	97	99.109	ENSCGRG00001012719	Smarca5	96	99.109	Cricetulus_griseus_chok1gshd
ENSPTIG00000020959	SMARCA5	96	99.398	ENSCGRG00000001417	Smarca5	99	99.597	Cricetulus_griseus_crigri
ENSPTIG00000020959	SMARCA5	97	96.620	ENSDNOG00000009158	SMARCA5	95	96.794	Dasypus_novemcinctus
ENSPTIG00000020959	SMARCA5	91	90.928	ENSDORG00000003466	Smarca5	97	90.928	Dipodomys_ordii
ENSPTIG00000020959	SMARCA5	93	85.744	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSPTIG00000020959	SMARCA5	97	99.604	ENSEASG00005001866	SMARCA5	98	99.879	Equus_asinus_asinus
ENSPTIG00000020959	SMARCA5	97	99.604	ENSECAG00000002676	SMARCA5	96	99.604	Equus_caballus
ENSPTIG00000020959	SMARCA5	95	95.267	ENSEEUG00000013176	SMARCA5	100	95.267	Erinaceus_europaeus
ENSPTIG00000020959	SMARCA5	93	89.278	ENSELUG00000014653	SMARCA5	99	89.278	Esox_lucius
ENSPTIG00000020959	SMARCA5	97	100.000	ENSFCAG00000004544	SMARCA5	96	100.000	Felis_catus
ENSPTIG00000020959	SMARCA5	93	97.526	ENSFALG00000004987	SMARCA5	100	97.526	Ficedula_albicollis
ENSPTIG00000020959	SMARCA5	97	98.806	ENSFDAG00000021016	SMARCA5	100	99.698	Fukomys_damarensis
ENSPTIG00000020959	SMARCA5	97	86.798	ENSGMOG00000007519	SMARCA5	94	89.355	Gadus_morhua
ENSPTIG00000020959	SMARCA5	97	96.934	ENSGALG00000009913	SMARCA5	97	96.934	Gallus_gallus
ENSPTIG00000020959	SMARCA5	94	90.686	ENSGACG00000017238	SMARCA5	95	90.686	Gasterosteus_aculeatus
ENSPTIG00000020959	SMARCA5	97	97.423	ENSGAGG00000019882	SMARCA5	97	97.423	Gopherus_agassizii
ENSPTIG00000020959	SMARCA5	97	99.109	ENSGGOG00000012595	SMARCA5	99	99.496	Gorilla_gorilla
ENSPTIG00000020959	SMARCA5	97	98.811	ENSHGLG00000000816	-	96	98.811	Heterocephalus_glaber_female
ENSPTIG00000020959	SMARCA5	97	89.652	ENSHGLG00000000317	-	95	89.780	Heterocephalus_glaber_female
ENSPTIG00000020959	SMARCA5	97	98.117	ENSHGLG00100018421	-	100	99.597	Heterocephalus_glaber_male
ENSPTIG00000020959	SMARCA5	97	99.406	ENSSTOG00000010683	SMARCA5	96	99.406	Ictidomys_tridecemlineatus
ENSPTIG00000020959	SMARCA5	97	99.010	ENSJJAG00000014965	Smarca5	96	99.010	Jaculus_jaculus
ENSPTIG00000020959	SMARCA5	95	95.661	ENSLACG00000007091	SMARCA5	97	95.661	Latimeria_chalumnae
ENSPTIG00000020959	SMARCA5	95	92.386	ENSLOCG00000008966	SMARCA5	96	92.386	Lepisosteus_oculatus
ENSPTIG00000020959	SMARCA5	97	99.505	ENSLAFG00000007795	SMARCA5	96	99.505	Loxodonta_africana
ENSPTIG00000020959	SMARCA5	97	99.208	ENSMFAG00000043649	SMARCA5	96	99.208	Macaca_fascicularis
ENSPTIG00000020959	SMARCA5	97	99.208	ENSMMUG00000000829	SMARCA5	97	99.473	Macaca_mulatta
ENSPTIG00000020959	SMARCA5	97	99.208	ENSMNEG00000031916	SMARCA5	96	99.208	Macaca_nemestrina
ENSPTIG00000020959	SMARCA5	97	99.208	ENSMLEG00000042393	SMARCA5	96	99.208	Mandrillus_leucophaeus
ENSPTIG00000020959	SMARCA5	96	97.300	ENSMGAG00000003517	SMARCA5	99	97.300	Meleagris_gallopavo
ENSPTIG00000020959	SMARCA5	95	99.698	ENSMAUG00000015902	Smarca5	98	99.698	Mesocricetus_auratus
ENSPTIG00000020959	SMARCA5	97	99.504	ENSMICG00000003971	SMARCA5	99	98.198	Microcebus_murinus
ENSPTIG00000020959	SMARCA5	97	98.911	ENSMOCG00000016986	-	96	98.911	Microtus_ochrogaster
ENSPTIG00000020959	SMARCA5	97	98.218	ENSMODG00000000391	SMARCA5	96	98.218	Monodelphis_domestica
ENSPTIG00000020959	SMARCA5	97	99.108	ENSMUSG00000031715	Smarca5	96	99.108	Mus_musculus
ENSPTIG00000020959	SMARCA5	97	99.306	MGP_PahariEiJ_G0022862	Smarca5	96	99.306	Mus_pahari
ENSPTIG00000020959	SMARCA5	97	99.703	ENSMLUG00000000468	SMARCA5	96	99.703	Myotis_lucifugus
ENSPTIG00000020959	SMARCA5	97	98.814	ENSNGAG00000000441	Smarca5	96	98.814	Nannospalax_galili
ENSPTIG00000020959	SMARCA5	97	99.208	ENSNLEG00000005383	SMARCA5	96	99.208	Nomascus_leucogenys
ENSPTIG00000020959	SMARCA5	93	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSPTIG00000020959	SMARCA5	86	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSPTIG00000020959	SMARCA5	93	99.174	ENSOANG00000013921	SMARCA5	100	99.174	Ornithorhynchus_anatinus
ENSPTIG00000020959	SMARCA5	93	99.794	ENSOCUG00000013042	SMARCA5	100	99.794	Oryctolagus_cuniculus
ENSPTIG00000020959	SMARCA5	97	99.505	ENSOGAG00000009702	SMARCA5	96	99.505	Otolemur_garnettii
ENSPTIG00000020959	SMARCA5	97	99.405	ENSOARG00000010589	SMARCA5	95	99.405	Ovis_aries
ENSPTIG00000020959	SMARCA5	97	99.010	ENSPPAG00000028523	SMARCA5	99	99.396	Pan_paniscus
ENSPTIG00000020959	SMARCA5	96	94.088	ENSPPRG00000004925	SMARCA5	95	94.990	Panthera_pardus
ENSPTIG00000020959	SMARCA5	97	99.109	ENSPTRG00000016472	SMARCA5	99	99.496	Pan_troglodytes
ENSPTIG00000020959	SMARCA5	97	99.208	ENSPANG00000001175	SMARCA5	96	99.208	Papio_anubis
ENSPTIG00000020959	SMARCA5	94	90.881	ENSPKIG00000015699	SMARCA5	98	89.835	Paramormyrops_kingsleyae
ENSPTIG00000020959	SMARCA5	96	89.500	ENSPKIG00000015885	SMARCA5	100	91.340	Paramormyrops_kingsleyae
ENSPTIG00000020959	SMARCA5	96	96.289	ENSPSIG00000004177	SMARCA5	100	96.289	Pelodiscus_sinensis
ENSPTIG00000020959	SMARCA5	93	90.021	ENSPMGG00000012316	SMARCA5	100	90.021	Periophthalmus_magnuspinnatus
ENSPTIG00000020959	SMARCA5	96	99.498	ENSPEMG00000008060	Smarca5	98	99.498	Peromyscus_maniculatus_bairdii
ENSPTIG00000020959	SMARCA5	97	69.813	ENSPMAG00000006011	SMARCA5	81	85.600	Petromyzon_marinus
ENSPTIG00000020959	SMARCA5	61	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSPTIG00000020959	SMARCA5	97	98.317	ENSPCIG00000003926	SMARCA5	96	98.317	Phascolarctos_cinereus
ENSPTIG00000020959	SMARCA5	97	99.109	ENSPPYG00000015091	SMARCA5	96	99.109	Pongo_abelii
ENSPTIG00000020959	SMARCA5	84	91.627	ENSPCAG00000014230	SMARCA5	83	95.833	Procavia_capensis
ENSPTIG00000020959	SMARCA5	97	96.634	ENSPCOG00000026744	SMARCA5	99	96.278	Propithecus_coquereli
ENSPTIG00000020959	SMARCA5	97	99.505	ENSPVAG00000006482	SMARCA5	96	99.505	Pteropus_vampyrus
ENSPTIG00000020959	SMARCA5	97	88.594	ENSPNAG00000027824	SMARCA5	97	90.456	Pygocentrus_nattereri
ENSPTIG00000020959	SMARCA5	96	99.497	ENSRNOG00000018149	Smarca5	100	99.497	Rattus_norvegicus
ENSPTIG00000020959	SMARCA5	97	99.011	ENSRBIG00000044644	SMARCA5	96	99.011	Rhinopithecus_bieti
ENSPTIG00000020959	SMARCA5	96	99.497	ENSRROG00000029591	SMARCA5	99	99.497	Rhinopithecus_roxellana
ENSPTIG00000020959	SMARCA5	97	99.010	ENSSBOG00000036257	SMARCA5	96	99.010	Saimiri_boliviensis_boliviensis
ENSPTIG00000020959	SMARCA5	95	99.194	ENSSHAG00000008464	SMARCA5	100	99.194	Sarcophilus_harrisii
ENSPTIG00000020959	SMARCA5	96	89.930	ENSSFOG00015013252	SMARCA5	97	90.352	Scleropages_formosus
ENSPTIG00000020959	SMARCA5	97	95.635	ENSSPUG00000007604	SMARCA5	99	96.583	Sphenodon_punctatus
ENSPTIG00000020959	SMARCA5	97	99.703	ENSSSCG00000009047	SMARCA5	96	99.703	Sus_scrofa
ENSPTIG00000020959	SMARCA5	97	96.230	ENSTGUG00000002408	SMARCA5	100	96.230	Taeniopygia_guttata
ENSPTIG00000020959	SMARCA5	95	99.798	ENSUAMG00000023495	SMARCA5	95	99.798	Ursus_americanus
ENSPTIG00000020959	SMARCA5	96	100.000	ENSUMAG00000015324	SMARCA5	97	100.000	Ursus_maritimus
ENSPTIG00000020959	SMARCA5	97	99.505	ENSVPAG00000008982	SMARCA5	96	99.505	Vicugna_pacos
ENSPTIG00000020959	SMARCA5	97	99.901	ENSVVUG00000017473	SMARCA5	96	99.901	Vulpes_vulpes
ENSPTIG00000020959	SMARCA5	91	93.242	ENSXETG00000017566	smarca5	95	93.242	Xenopus_tropicalis