EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000021101 (Gene tree)
Gene ID: 102951645
Gene Symbol: SETX
Alias: -
Full Name: senataxin
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 55563 bases
Position: chrKE721715.1:3033149-3088711
Accession: 102951645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000025261	SEN1_N	PF12726.7	2.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000029776	SETX-201	8010	XM_007078842	ENSPTIP00000025261	2669 (aa)	XP_007078904	UPI00042BD468

Gene Model

Click here to download ENSPTIG00000021101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000021101's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000021101	SETX	100	77.646	ENSG00000107290	SETX	100	81.560	Homo_sapiens
ENSPTIG00000021101	SETX	70	43.750	ENSAMXG00000014406	-	84	43.750	Astyanax_mexicanus
ENSPTIG00000021101	SETX	100	76.837	ENSCJAG00000018245	SETX	100	76.912	Callithrix_jacchus
ENSPTIG00000021101	SETX	100	71.466	ENSCPOG00000001492	SETX	100	71.466	Cavia_porcellus
ENSPTIG00000021101	SETX	97	74.111	ENSCLAG00000012582	SETX	99	73.461	Chinchilla_lanigera
ENSPTIG00000021101	SETX	74	93.817	ENSETEG00000008111	-	74	93.817	Echinops_telfairi
ENSPTIG00000021101	SETX	91	82.495	ENSECAG00000012019	SETX	99	82.536	Equus_caballus
ENSPTIG00000021101	SETX	79	43.551	ENSELUG00000022536	-	84	42.296	Esox_lucius
ENSPTIG00000021101	SETX	100	97.116	ENSFCAG00000007102	SETX	100	97.116	Felis_catus
ENSPTIG00000021101	SETX	78	72.667	ENSFALG00000001464	SETX	81	72.667	Ficedula_albicollis
ENSPTIG00000021101	SETX	100	76.300	ENSGGOG00000027664	SETX	96	83.231	Gorilla_gorilla
ENSPTIG00000021101	SETX	67	46.330	ENSIPUG00000006685	setx	77	46.330	Ictalurus_punctatus
ENSPTIG00000021101	SETX	83	53.907	ENSLOCG00000004264	SETX	89	54.067	Lepisosteus_oculatus
ENSPTIG00000021101	SETX	99	66.942	ENSMOCG00000000848	Setx	99	67.871	Microtus_ochrogaster
ENSPTIG00000021101	SETX	100	70.547	MGP_PahariEiJ_G0024821	Setx	100	70.621	Mus_pahari
ENSPTIG00000021101	SETX	98	77.601	ENSNLEG00000012839	SETX	100	77.601	Nomascus_leucogenys
ENSPTIG00000021101	SETX	95	71.884	ENSOCUG00000005616	SETX	97	71.691	Oryctolagus_cuniculus
ENSPTIG00000021101	SETX	99	78.144	ENSOGAG00000013387	SETX	99	77.961	Otolemur_garnettii
ENSPTIG00000021101	SETX	100	77.200	ENSPPAG00000004108	SETX	96	82.367	Pan_paniscus
ENSPTIG00000021101	SETX	100	99.326	ENSPPRG00000012867	SETX	100	99.326	Panthera_pardus
ENSPTIG00000021101	SETX	100	77.014	ENSPTRG00000021495	SETX	100	77.089	Pan_troglodytes
ENSPTIG00000021101	SETX	77	49.418	ENSPKIG00000025162	SETX	80	49.750	Paramormyrops_kingsleyae
ENSPTIG00000021101	SETX	59	93.103	ENSSARG00000002336	-	63	93.103	Sorex_araneus
ENSPTIG00000021101	SETX	88	70.317	ENSSPUG00000016332	SETX	90	70.654	Sphenodon_punctatus
ENSPTIG00000021101	SETX	99	77.274	ENSSSCG00000005724	SETX	99	77.349	Sus_scrofa
ENSPTIG00000021101	SETX	79	72.379	ENSTGUG00000005117	SETX	86	72.379	Taeniopygia_guttata
ENSPTIG00000021101	SETX	79	64.238	ENSXETG00000006254	setx	88	64.238	Xenopus_tropicalis