EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000021154 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: -
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 183069 bases
Position: chrKE721686.1:2800716-2983784
Accession: 102951164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000025363	Fox-1_C	PF12414.8	1.2e-16	1	1
ENSPTIP00000025384	Fox-1_C	PF12414.8	1.3e-16	1	1
ENSPTIP00000025358	Fox-1_C	PF12414.8	1.3e-16	1	1
ENSPTIP00000025363	RRM_1	PF00076.22	2.8e-18	1	1
ENSPTIP00000025358	RRM_1	PF00076.22	2.8e-18	1	1
ENSPTIP00000025391	RRM_1	PF00076.22	2.8e-18	1	1
ENSPTIP00000025384	RRM_1	PF00076.22	3.1e-18	1	1
ENSPTIP00000025381	RRM_1	PF00076.22	3.6e-18	1	1
ENSPTIP00000025396	RRM_1	PF00076.22	4.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000029917	RBFOX1-206	1071	-	ENSPTIP00000025396	356 (aa)	-	-
ENSPTIT00000029912	RBFOX1-205	1083	-	ENSPTIP00000025391	360 (aa)	-	-
ENSPTIT00000029901	RBFOX1-203	1272	-	ENSPTIP00000025381	423 (aa)	-	-
ENSPTIT00000029904	RBFOX1-204	1176	-	ENSPTIP00000025384	391 (aa)	-	-
ENSPTIT00000029877	RBFOX1-201	1116	-	ENSPTIP00000025358	371 (aa)	-	-
ENSPTIT00000029883	RBFOX1-202	1113	XM_015535190	ENSPTIP00000025363	370 (aa)	XP_015390676	-

Gene Model

Click here to download ENSPTIG00000021154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000021154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000021154	RBFOX1	100	55.854	ENSPTIG00000019147	RBFOX2	99	55.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000021154	RBFOX1	99	86.632	ENSG00000078328	RBFOX1	96	94.841	Homo_sapiens
ENSPTIG00000021154	RBFOX1	100	69.409	ENSAPOG00000003197	rbfox1	100	68.939	Acanthochromis_polyacanthus
ENSPTIG00000021154	RBFOX1	68	89.388	ENSAMEG00000008605	RBFOX1	98	89.388	Ailuropoda_melanoleuca
ENSPTIG00000021154	RBFOX1	67	58.759	ENSACIG00000005478	rbfox1	68	59.410	Amphilophus_citrinellus
ENSPTIG00000021154	RBFOX1	60	71.795	ENSAOCG00000008283	rbfox1	82	71.008	Amphiprion_ocellaris
ENSPTIG00000021154	RBFOX1	96	65.363	ENSAPEG00000010636	rbfox1	100	65.833	Amphiprion_percula
ENSPTIG00000021154	RBFOX1	60	70.763	ENSATEG00000007513	rbfox1	82	70.000	Anabas_testudineus
ENSPTIG00000021154	RBFOX1	100	82.143	ENSAPLG00000013263	RBFOX1	98	83.376	Anas_platyrhynchos
ENSPTIG00000021154	RBFOX1	99	75.510	ENSACAG00000004013	RBFOX1	98	76.471	Anolis_carolinensis
ENSPTIG00000021154	RBFOX1	99	87.097	ENSANAG00000029527	RBFOX1	98	87.097	Aotus_nancymaae
ENSPTIG00000021154	RBFOX1	62	85.586	ENSAMXG00000002431	rbfox1	64	85.650	Astyanax_mexicanus
ENSPTIG00000021154	RBFOX1	100	83.503	ENSBTAG00000007210	RBFOX1	98	84.478	Bos_taurus
ENSPTIG00000021154	RBFOX1	99	86.118	ENSCJAG00000017351	RBFOX1	96	86.957	Callithrix_jacchus
ENSPTIG00000021154	RBFOX1	99	85.385	ENSCAFG00000019082	RBFOX1	93	86.375	Canis_familiaris
ENSPTIG00000021154	RBFOX1	99	81.163	ENSCAFG00020024881	RBFOX1	99	80.992	Canis_lupus_dingo
ENSPTIG00000021154	RBFOX1	100	83.503	ENSCHIG00000023549	RBFOX1	98	84.478	Capra_hircus
ENSPTIG00000021154	RBFOX1	99	86.792	ENSTSYG00000005334	RBFOX1	100	86.327	Carlito_syrichta
ENSPTIG00000021154	RBFOX1	99	86.340	ENSCAPG00000017669	RBFOX1	100	87.113	Cavia_aperea
ENSPTIG00000021154	RBFOX1	99	86.340	ENSCPOG00000011314	RBFOX1	99	87.113	Cavia_porcellus
ENSPTIG00000021154	RBFOX1	99	84.469	ENSCCAG00000023031	RBFOX1	96	84.824	Cebus_capucinus
ENSPTIG00000021154	RBFOX1	99	85.014	ENSCATG00000033816	RBFOX1	96	85.366	Cercocebus_atys
ENSPTIG00000021154	RBFOX1	100	85.969	ENSCLAG00000012761	RBFOX1	98	87.113	Chinchilla_lanigera
ENSPTIG00000021154	RBFOX1	92	78.962	ENSCSAG00000008739	RBFOX1	98	81.030	Chlorocebus_sabaeus
ENSPTIG00000021154	RBFOX1	100	71.939	ENSCHOG00000012843	RBFOX1	94	72.194	Choloepus_hoffmanni
ENSPTIG00000021154	RBFOX1	99	82.519	ENSCPBG00000026626	RBFOX1	98	80.916	Chrysemys_picta_bellii
ENSPTIG00000021154	RBFOX1	99	85.014	ENSCANG00000033125	RBFOX1	96	85.366	Colobus_angolensis_palliatus
ENSPTIG00000021154	RBFOX1	99	85.604	ENSCGRG00001013729	Rbfox1	100	85.390	Cricetulus_griseus_chok1gshd
ENSPTIG00000021154	RBFOX1	99	85.604	ENSCGRG00000003272	Rbfox1	100	85.390	Cricetulus_griseus_crigri
ENSPTIG00000021154	RBFOX1	96	64.267	ENSCSEG00000008840	rbfox1	100	64.721	Cynoglossus_semilaevis
ENSPTIG00000021154	RBFOX1	100	74.933	ENSDARG00000014746	rbfox1	100	84.390	Danio_rerio
ENSPTIG00000021154	RBFOX1	99	86.118	ENSDNOG00000043612	RBFOX1	93	87.113	Dasypus_novemcinctus
ENSPTIG00000021154	RBFOX1	99	83.887	ENSDORG00000010024	Rbfox1	100	82.673	Dipodomys_ordii
ENSPTIG00000021154	RBFOX1	85	89.109	ENSETEG00000003771	RBFOX1	93	65.553	Echinops_telfairi
ENSPTIG00000021154	RBFOX1	100	86.224	ENSEASG00005011599	RBFOX1	98	85.242	Equus_asinus_asinus
ENSPTIG00000021154	RBFOX1	100	83.969	ENSECAG00000012667	RBFOX1	98	80.759	Equus_caballus
ENSPTIG00000021154	RBFOX1	99	53.261	ENSELUG00000013096	rbfox1	97	52.446	Esox_lucius
ENSPTIG00000021154	RBFOX1	100	86.990	ENSFCAG00000025322	RBFOX1	98	81.572	Felis_catus
ENSPTIG00000021154	RBFOX1	82	79.755	ENSFALG00000004027	RBFOX1	98	80.923	Ficedula_albicollis
ENSPTIG00000021154	RBFOX1	99	86.856	ENSFDAG00000007388	RBFOX1	100	86.398	Fukomys_damarensis
ENSPTIG00000021154	RBFOX1	99	80.000	ENSGALG00000034325	RBFOX1	97	77.717	Gallus_gallus
ENSPTIG00000021154	RBFOX1	99	80.000	ENSGAGG00000023681	RBFOX1	100	83.289	Gopherus_agassizii
ENSPTIG00000021154	RBFOX1	99	87.634	ENSGGOG00000016871	-	98	87.634	Gorilla_gorilla
ENSPTIG00000021154	RBFOX1	100	86.224	ENSHGLG00000016944	RBFOX1	100	86.146	Heterocephalus_glaber_female
ENSPTIG00000021154	RBFOX1	100	86.224	ENSHGLG00100003272	RBFOX1	100	86.146	Heterocephalus_glaber_male
ENSPTIG00000021154	RBFOX1	85	61.934	ENSHCOG00000016419	rbfox1	91	64.907	Hippocampus_comes
ENSPTIG00000021154	RBFOX1	96	76.685	ENSIPUG00000015215	rbfox1	100	77.095	Ictalurus_punctatus
ENSPTIG00000021154	RBFOX1	99	85.604	ENSSTOG00000000322	RBFOX1	100	85.390	Ictidomys_tridecemlineatus
ENSPTIG00000021154	RBFOX1	99	82.776	ENSJJAG00000002575	Rbfox1	100	82.620	Jaculus_jaculus
ENSPTIG00000021154	RBFOX1	99	66.844	ENSLBEG00000014659	rbfox1	98	66.844	Labrus_bergylta
ENSPTIG00000021154	RBFOX1	99	75.510	ENSLOCG00000006675	rbfox1	98	76.215	Lepisosteus_oculatus
ENSPTIG00000021154	RBFOX1	77	84.365	ENSLAFG00000011480	RBFOX1	99	85.621	Loxodonta_africana
ENSPTIG00000021154	RBFOX1	99	87.332	ENSMFAG00000036447	RBFOX1	96	87.332	Macaca_fascicularis
ENSPTIG00000021154	RBFOX1	98	86.234	ENSMMUG00000003458	RBFOX1	97	87.240	Macaca_mulatta
ENSPTIG00000021154	RBFOX1	99	84.359	ENSMNEG00000032034	RBFOX1	98	82.775	Macaca_nemestrina
ENSPTIG00000021154	RBFOX1	99	85.014	ENSMLEG00000015382	RBFOX1	96	85.366	Mandrillus_leucophaeus
ENSPTIG00000021154	RBFOX1	96	68.733	ENSMAMG00000003142	rbfox1	100	69.067	Mastacembelus_armatus
ENSPTIG00000021154	RBFOX1	66	88.235	ENSMGAG00000008606	RBFOX1	82	88.235	Meleagris_gallopavo
ENSPTIG00000021154	RBFOX1	98	56.397	ENSMAUG00000020570	Rbfox1	96	56.397	Mesocricetus_auratus
ENSPTIG00000021154	RBFOX1	99	84.469	ENSMICG00000034286	RBFOX1	96	84.824	Microcebus_murinus
ENSPTIG00000021154	RBFOX1	99	85.604	ENSMOCG00000020932	Rbfox1	100	86.458	Microtus_ochrogaster
ENSPTIG00000021154	RBFOX1	85	64.465	ENSMMOG00000009716	rbfox1	86	65.409	Mola_mola
ENSPTIG00000021154	RBFOX1	89	77.183	ENSMODG00000005826	RBFOX1	100	79.944	Monodelphis_domestica
ENSPTIG00000021154	RBFOX1	100	67.513	ENSMALG00000003337	rbfox1	100	69.231	Monopterus_albus
ENSPTIG00000021154	RBFOX1	99	85.861	MGP_CAROLIEiJ_G0020427	Rbfox1	100	85.642	Mus_caroli
ENSPTIG00000021154	RBFOX1	100	84.949	ENSMUSG00000008658	Rbfox1	100	85.390	Mus_musculus
ENSPTIG00000021154	RBFOX1	99	85.861	MGP_PahariEiJ_G0016135	Rbfox1	100	85.642	Mus_pahari
ENSPTIG00000021154	RBFOX1	99	85.604	MGP_SPRETEiJ_G0021321	Rbfox1	100	85.390	Mus_spretus
ENSPTIG00000021154	RBFOX1	98	76.410	ENSMPUG00000014822	RBFOX1	99	77.121	Mustela_putorius_furo
ENSPTIG00000021154	RBFOX1	77	84.967	ENSMLUG00000015896	RBFOX1	99	86.230	Myotis_lucifugus
ENSPTIG00000021154	RBFOX1	100	86.224	ENSNGAG00000023276	Rbfox1	100	87.371	Nannospalax_galili
ENSPTIG00000021154	RBFOX1	100	54.177	ENSNBRG00000011084	rbfox1	95	54.415	Neolamprologus_brichardi
ENSPTIG00000021154	RBFOX1	99	84.741	ENSNLEG00000010017	-	96	85.095	Nomascus_leucogenys
ENSPTIG00000021154	RBFOX1	99	77.121	ENSMEUG00000012525	RBFOX1	94	76.923	Notamacropus_eugenii
ENSPTIG00000021154	RBFOX1	99	76.350	ENSOPRG00000006199	-	93	76.350	Ochotona_princeps
ENSPTIG00000021154	RBFOX1	99	85.567	ENSODEG00000013166	RBFOX1	100	85.139	Octodon_degus
ENSPTIG00000021154	RBFOX1	92	77.260	ENSOANG00000002379	RBFOX1	98	79.133	Ornithorhynchus_anatinus
ENSPTIG00000021154	RBFOX1	60	94.907	ENSOCUG00000001205	-	96	94.907	Oryctolagus_cuniculus
ENSPTIG00000021154	RBFOX1	99	86.375	ENSOGAG00000025535	RBFOX1	98	87.371	Otolemur_garnettii
ENSPTIG00000021154	RBFOX1	63	92.444	ENSOARG00000005135	RBFOX1	96	92.444	Ovis_aries
ENSPTIG00000021154	RBFOX1	99	87.634	ENSPPAG00000036238	-	100	87.629	Pan_paniscus
ENSPTIG00000021154	RBFOX1	99	86.104	ENSPPRG00000006546	RBFOX1	96	86.450	Panthera_pardus
ENSPTIG00000021154	RBFOX1	99	87.634	ENSPTRG00000007744	RBFOX1	98	87.634	Pan_troglodytes
ENSPTIG00000021154	RBFOX1	99	85.014	ENSPANG00000026500	RBFOX1	96	85.366	Papio_anubis
ENSPTIG00000021154	RBFOX1	99	74.332	ENSPKIG00000009667	-	95	76.791	Paramormyrops_kingsleyae
ENSPTIG00000021154	RBFOX1	61	88.532	ENSPKIG00000019353	rbfox1	71	88.532	Paramormyrops_kingsleyae
ENSPTIG00000021154	RBFOX1	100	81.934	ENSPSIG00000006523	RBFOX1	98	82.908	Pelodiscus_sinensis
ENSPTIG00000021154	RBFOX1	99	85.861	ENSPEMG00000017607	Rbfox1	100	85.642	Peromyscus_maniculatus_bairdii
ENSPTIG00000021154	RBFOX1	73	79.725	ENSPCIG00000026887	RBFOX1	100	80.556	Phascolarctos_cinereus
ENSPTIG00000021154	RBFOX1	98	76.410	ENSPPYG00000007079	-	99	77.121	Pongo_abelii
ENSPTIG00000021154	RBFOX1	88	74.286	ENSPCAG00000002630	RBFOX1	93	75.000	Procavia_capensis
ENSPTIG00000021154	RBFOX1	99	84.469	ENSPCOG00000025687	RBFOX1	96	84.824	Propithecus_coquereli
ENSPTIG00000021154	RBFOX1	99	80.000	ENSPVAG00000013467	RBFOX1	93	80.977	Pteropus_vampyrus
ENSPTIG00000021154	RBFOX1	96	74.400	ENSPNAG00000023109	rbfox1	100	74.801	Pygocentrus_nattereri
ENSPTIG00000021154	RBFOX1	99	85.604	ENSRNOG00000002827	Rbfox1	93	86.598	Rattus_norvegicus
ENSPTIG00000021154	RBFOX1	99	86.632	ENSRBIG00000044478	RBFOX1	100	87.629	Rhinopithecus_bieti
ENSPTIG00000021154	RBFOX1	99	85.014	ENSRROG00000044411	RBFOX1	96	85.366	Rhinopithecus_roxellana
ENSPTIG00000021154	RBFOX1	99	87.332	ENSSBOG00000033726	RBFOX1	100	86.280	Saimiri_boliviensis_boliviensis
ENSPTIG00000021154	RBFOX1	99	81.491	ENSSHAG00000009257	RBFOX1	100	81.108	Sarcophilus_harrisii
ENSPTIG00000021154	RBFOX1	100	74.468	ENSSFOG00015023675	rbfox1	98	74.468	Scleropages_formosus
ENSPTIG00000021154	RBFOX1	88	61.095	ENSSFOG00015009955	-	84	64.412	Scleropages_formosus
ENSPTIG00000021154	RBFOX1	100	69.948	ENSSMAG00000015505	rbfox1	93	70.361	Scophthalmus_maximus
ENSPTIG00000021154	RBFOX1	100	68.449	ENSSDUG00000016413	rbfox1	99	69.003	Seriola_dumerili
ENSPTIG00000021154	RBFOX1	85	64.890	ENSSLDG00000009353	rbfox1	97	62.145	Seriola_lalandi_dorsalis
ENSPTIG00000021154	RBFOX1	85	74.922	ENSSPUG00000009732	RBFOX1	87	75.549	Sphenodon_punctatus
ENSPTIG00000021154	RBFOX1	99	68.895	ENSSPAG00000009723	rbfox1	100	69.948	Stegastes_partitus
ENSPTIG00000021154	RBFOX1	96	85.638	ENSSSCG00000007917	RBFOX1	100	80.508	Sus_scrofa
ENSPTIG00000021154	RBFOX1	99	82.519	ENSTGUG00000004562	RBFOX1	99	83.505	Taeniopygia_guttata
ENSPTIG00000021154	RBFOX1	100	69.072	ENSTRUG00000020940	rbfox1	100	69.565	Takifugu_rubripes
ENSPTIG00000021154	RBFOX1	66	54.225	ENSTNIG00000002567	rbfox1	99	54.930	Tetraodon_nigroviridis
ENSPTIG00000021154	RBFOX1	77	73.529	ENSTBEG00000009169	-	73	73.529	Tupaia_belangeri
ENSPTIG00000021154	RBFOX1	99	84.103	ENSTTRG00000005700	RBFOX1	93	85.090	Tursiops_truncatus
ENSPTIG00000021154	RBFOX1	100	87.003	ENSUAMG00000024633	RBFOX1	100	87.003	Ursus_americanus
ENSPTIG00000021154	RBFOX1	100	91.689	ENSUMAG00000003579	RBFOX1	100	91.689	Ursus_maritimus
ENSPTIG00000021154	RBFOX1	77	82.085	ENSVPAG00000001284	RBFOX1	73	83.333	Vicugna_pacos
ENSPTIG00000021154	RBFOX1	100	86.480	ENSVVUG00000017311	RBFOX1	100	86.563	Vulpes_vulpes