EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000021223 (Gene tree)
Gene ID: 102967112
Gene Symbol: A1CF
Alias: -
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 77667 bases
Position: chrKE722324.1:6257081-6334747
Accession: 102967112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000025475	DND1_DSRM	PF14709.7	1e-24	1	1
ENSPTIP00000025481	DND1_DSRM	PF14709.7	1.1e-24	1	1
ENSPTIP00000025475	RRM_1	PF00076.22	1.1e-39	1	3
ENSPTIP00000025475	RRM_1	PF00076.22	1.1e-39	2	3
ENSPTIP00000025475	RRM_1	PF00076.22	1.1e-39	3	3
ENSPTIP00000025481	RRM_1	PF00076.22	1.3e-39	1	3
ENSPTIP00000025481	RRM_1	PF00076.22	1.3e-39	2	3
ENSPTIP00000025481	RRM_1	PF00076.22	1.3e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000030004	A1CF-202	1797	-	ENSPTIP00000025481	598 (aa)	-	-
ENSPTIT00000029998	A1CF-201	2742	XM_007098122	ENSPTIP00000025475	592 (aa)	XP_007098184	UPI0007663096

Gene Model

Click here to download ENSPTIG00000021223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000021223's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000021223	A1CF	74	69.206	ENSPTIG00000017449	RBM46	88	69.206
ENSPTIG00000021223	A1CF	64	55.335	ENSPTIG00000017046	RBM47	78	55.831
ENSPTIG00000021223	A1CF	52	52.104	ENSPTIG00000013821	SYNCRIP	57	51.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000021223	A1CF	100	94.781	ENSG00000148584	A1CF	100	96.517	Homo_sapiens
ENSPTIG00000021223	A1CF	100	73.211	ENSAPOG00000008259	a1cf	100	72.546	Acanthochromis_polyacanthus
ENSPTIG00000021223	A1CF	100	96.453	ENSAMEG00000000523	A1CF	100	96.453	Ailuropoda_melanoleuca
ENSPTIG00000021223	A1CF	100	74.878	ENSACIG00000008632	a1cf	100	75.530	Amphilophus_citrinellus
ENSPTIG00000021223	A1CF	100	73.727	ENSAOCG00000023744	a1cf	96	83.478	Amphiprion_ocellaris
ENSPTIG00000021223	A1CF	100	74.713	ENSAPEG00000009537	a1cf	100	74.713	Amphiprion_percula
ENSPTIG00000021223	A1CF	100	75.081	ENSATEG00000013720	a1cf	100	75.902	Anabas_testudineus
ENSPTIG00000021223	A1CF	100	88.364	ENSAPLG00000002964	A1CF	100	88.196	Anas_platyrhynchos
ENSPTIG00000021223	A1CF	100	82.631	ENSACAG00000015269	A1CF	100	81.619	Anolis_carolinensis
ENSPTIG00000021223	A1CF	100	93.603	ENSANAG00000019974	A1CF	100	93.434	Aotus_nancymaae
ENSPTIG00000021223	A1CF	100	73.235	ENSACLG00000017428	a1cf	100	74.713	Astatotilapia_calliptera
ENSPTIG00000021223	A1CF	100	74.876	ENSAMXG00000018180	a1cf	100	74.050	Astyanax_mexicanus
ENSPTIG00000021223	A1CF	100	93.109	ENSBTAG00000021195	A1CF	100	92.941	Bos_taurus
ENSPTIG00000021223	A1CF	100	95.286	ENSCJAG00000005045	A1CF	100	95.118	Callithrix_jacchus
ENSPTIG00000021223	A1CF	100	97.128	ENSCAFG00000015581	A1CF	100	97.128	Canis_familiaris
ENSPTIG00000021223	A1CF	100	97.128	ENSCAFG00020026421	A1CF	100	97.128	Canis_lupus_dingo
ENSPTIG00000021223	A1CF	100	93.782	ENSCHIG00000020411	A1CF	100	93.613	Capra_hircus
ENSPTIG00000021223	A1CF	100	90.803	ENSTSYG00000001755	A1CF	100	93.739	Carlito_syrichta
ENSPTIG00000021223	A1CF	100	81.288	ENSCAPG00000017386	A1CF	90	92.308	Cavia_aperea
ENSPTIG00000021223	A1CF	100	93.434	ENSCPOG00000009807	A1CF	100	93.434	Cavia_porcellus
ENSPTIG00000021223	A1CF	100	95.447	ENSCCAG00000018168	A1CF	100	95.278	Cebus_capucinus
ENSPTIG00000021223	A1CF	100	93.750	ENSCATG00000043715	A1CF	100	93.750	Cercocebus_atys
ENSPTIG00000021223	A1CF	100	93.456	ENSCLAG00000010424	A1CF	100	92.785	Chinchilla_lanigera
ENSPTIG00000021223	A1CF	100	94.932	ENSCSAG00000007032	A1CF	100	94.932	Chlorocebus_sabaeus
ENSPTIG00000021223	A1CF	100	88.889	ENSCHOG00000009089	A1CF	100	88.060	Choloepus_hoffmanni
ENSPTIG00000021223	A1CF	100	87.858	ENSCPBG00000026464	A1CF	100	87.521	Chrysemys_picta_bellii
ENSPTIG00000021223	A1CF	100	95.101	ENSCANG00000038032	A1CF	100	95.101	Colobus_angolensis_palliatus
ENSPTIG00000021223	A1CF	100	91.933	ENSCGRG00001017413	A1cf	100	91.765	Cricetulus_griseus_chok1gshd
ENSPTIG00000021223	A1CF	100	91.261	ENSCGRG00000017332	A1cf	100	92.101	Cricetulus_griseus_crigri
ENSPTIG00000021223	A1CF	100	74.959	ENSCSEG00000002361	a1cf	100	75.456	Cynoglossus_semilaevis
ENSPTIG00000021223	A1CF	100	74.430	ENSCVAG00000010520	a1cf	100	75.574	Cyprinodon_variegatus
ENSPTIG00000021223	A1CF	100	77.759	ENSDARG00000002968	a1cf	100	79.097	Danio_rerio
ENSPTIG00000021223	A1CF	100	93.277	ENSDNOG00000002829	A1CF	100	93.277	Dasypus_novemcinctus
ENSPTIG00000021223	A1CF	81	90.942	ENSETEG00000012527	A1CF	81	90.942	Echinops_telfairi
ENSPTIG00000021223	A1CF	100	95.980	ENSEASG00005012924	A1CF	100	95.980	Equus_asinus_asinus
ENSPTIG00000021223	A1CF	100	95.645	ENSECAG00000010424	A1CF	100	95.645	Equus_caballus
ENSPTIG00000021223	A1CF	78	80.043	ENSEEUG00000000013	A1CF	97	80.444	Erinaceus_europaeus
ENSPTIG00000021223	A1CF	100	78.763	ENSELUG00000003159	a1cf	100	79.599	Esox_lucius
ENSPTIG00000021223	A1CF	100	98.829	ENSFCAG00000011179	A1CF	100	98.829	Felis_catus
ENSPTIG00000021223	A1CF	100	86.509	ENSFALG00000013183	A1CF	100	86.172	Ficedula_albicollis
ENSPTIG00000021223	A1CF	100	91.429	ENSFDAG00000019371	A1CF	100	90.756	Fukomys_damarensis
ENSPTIG00000021223	A1CF	100	70.033	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSPTIG00000021223	A1CF	100	72.066	ENSGMOG00000018943	a1cf	100	71.476	Gadus_morhua
ENSPTIG00000021223	A1CF	95	88.612	ENSGALG00000003765	A1CF	97	88.256	Gallus_gallus
ENSPTIG00000021223	A1CF	100	69.572	ENSGAFG00000014868	a1cf	100	70.066	Gambusia_affinis
ENSPTIG00000021223	A1CF	100	73.849	ENSGACG00000010241	a1cf	100	74.098	Gasterosteus_aculeatus
ENSPTIG00000021223	A1CF	94	87.679	ENSGAGG00000016508	A1CF	97	87.321	Gopherus_agassizii
ENSPTIG00000021223	A1CF	100	94.949	ENSGGOG00000009670	A1CF	100	94.444	Gorilla_gorilla
ENSPTIG00000021223	A1CF	100	74.062	ENSHBUG00000021959	a1cf	100	75.204	Haplochromis_burtoni
ENSPTIG00000021223	A1CF	100	93.613	ENSHGLG00000008955	A1CF	100	92.941	Heterocephalus_glaber_female
ENSPTIG00000021223	A1CF	100	92.941	ENSHGLG00100000518	A1CF	100	92.269	Heterocephalus_glaber_male
ENSPTIG00000021223	A1CF	100	70.752	ENSHCOG00000017669	a1cf	100	72.594	Hippocampus_comes
ENSPTIG00000021223	A1CF	90	82.463	ENSIPUG00000010367	a1cf	95	82.927	Ictalurus_punctatus
ENSPTIG00000021223	A1CF	100	76.585	ENSKMAG00000006568	a1cf	100	76.985	Kryptolebias_marmoratus
ENSPTIG00000021223	A1CF	99	74.795	ENSLBEG00000020994	a1cf	98	75.783	Labrus_bergylta
ENSPTIG00000021223	A1CF	100	81.040	ENSLACG00000008061	A1CF	100	80.872	Latimeria_chalumnae
ENSPTIG00000021223	A1CF	100	82.412	ENSLOCG00000006302	a1cf	100	81.910	Lepisosteus_oculatus
ENSPTIG00000021223	A1CF	100	93.613	ENSLAFG00000015462	A1CF	100	93.277	Loxodonta_africana
ENSPTIG00000021223	A1CF	100	93.919	ENSMFAG00000035948	A1CF	100	93.919	Macaca_fascicularis
ENSPTIG00000021223	A1CF	100	93.919	ENSMMUG00000007077	A1CF	100	93.919	Macaca_mulatta
ENSPTIG00000021223	A1CF	100	93.581	ENSMNEG00000031454	A1CF	100	93.581	Macaca_nemestrina
ENSPTIG00000021223	A1CF	100	95.101	ENSMLEG00000037223	A1CF	100	95.101	Mandrillus_leucophaeus
ENSPTIG00000021223	A1CF	100	73.322	ENSMAMG00000010402	a1cf	100	74.510	Mastacembelus_armatus
ENSPTIG00000021223	A1CF	100	76.127	ENSMZEG00005013245	a1cf	100	76.884	Maylandia_zebra
ENSPTIG00000021223	A1CF	100	88.721	ENSMGAG00000001507	A1CF	100	88.384	Meleagris_gallopavo
ENSPTIG00000021223	A1CF	100	91.429	ENSMAUG00000007422	A1cf	100	91.261	Mesocricetus_auratus
ENSPTIG00000021223	A1CF	100	92.140	ENSMICG00000003377	A1CF	100	91.973	Microcebus_murinus
ENSPTIG00000021223	A1CF	100	91.933	ENSMOCG00000021536	A1cf	100	91.765	Microtus_ochrogaster
ENSPTIG00000021223	A1CF	100	67.159	ENSMMOG00000009422	a1cf	100	69.243	Mola_mola
ENSPTIG00000021223	A1CF	92	88.624	ENSMODG00000016478	A1CF	97	88.847	Monodelphis_domestica
ENSPTIG00000021223	A1CF	100	73.199	ENSMALG00000012992	a1cf	100	72.864	Monopterus_albus
ENSPTIG00000021223	A1CF	100	90.924	MGP_CAROLIEiJ_G0022873	A1cf	100	90.588	Mus_caroli
ENSPTIG00000021223	A1CF	100	90.924	ENSMUSG00000052595	A1cf	99	93.947	Mus_musculus
ENSPTIG00000021223	A1CF	100	90.924	MGP_PahariEiJ_G0014366	A1cf	100	89.748	Mus_pahari
ENSPTIG00000021223	A1CF	100	90.756	MGP_SPRETEiJ_G0023792	A1cf	100	90.420	Mus_spretus
ENSPTIG00000021223	A1CF	100	89.865	ENSMPUG00000016971	A1CF	100	89.865	Mustela_putorius_furo
ENSPTIG00000021223	A1CF	100	93.782	ENSMLUG00000016071	A1CF	100	93.782	Myotis_lucifugus
ENSPTIG00000021223	A1CF	100	92.941	ENSNGAG00000015136	A1cf	100	92.941	Nannospalax_galili
ENSPTIG00000021223	A1CF	100	74.388	ENSNBRG00000001712	a1cf	100	75.530	Neolamprologus_brichardi
ENSPTIG00000021223	A1CF	100	95.294	ENSNLEG00000012028	A1CF	100	94.622	Nomascus_leucogenys
ENSPTIG00000021223	A1CF	94	88.571	ENSMEUG00000015909	A1CF	100	88.214	Notamacropus_eugenii
ENSPTIG00000021223	A1CF	89	83.048	ENSOPRG00000010667	A1CF	97	83.144	Ochotona_princeps
ENSPTIG00000021223	A1CF	100	74.551	ENSONIG00000019105	a1cf	100	76.020	Oreochromis_niloticus
ENSPTIG00000021223	A1CF	78	86.938	ENSOANG00000007360	A1CF	99	86.938	Ornithorhynchus_anatinus
ENSPTIG00000021223	A1CF	100	91.275	ENSOCUG00000011587	A1CF	100	91.611	Oryctolagus_cuniculus
ENSPTIG00000021223	A1CF	100	74.056	ENSORLG00000013342	a1cf	100	74.220	Oryzias_latipes
ENSPTIG00000021223	A1CF	100	75.450	ENSORLG00020000586	a1cf	100	75.000	Oryzias_latipes_hni
ENSPTIG00000021223	A1CF	100	75.286	ENSORLG00015018569	a1cf	100	74.837	Oryzias_latipes_hsok
ENSPTIG00000021223	A1CF	100	74.304	ENSOMEG00000013531	a1cf	100	73.159	Oryzias_melastigma
ENSPTIG00000021223	A1CF	100	93.243	ENSOGAG00000012884	A1CF	100	93.243	Otolemur_garnettii
ENSPTIG00000021223	A1CF	100	94.286	ENSOARG00000013695	A1CF	100	93.950	Ovis_aries
ENSPTIG00000021223	A1CF	100	91.196	ENSPPAG00000028115	A1CF	100	96.356	Pan_paniscus
ENSPTIG00000021223	A1CF	100	100.000	ENSPPRG00000012180	A1CF	100	100.000	Panthera_pardus
ENSPTIG00000021223	A1CF	100	94.781	ENSPTRG00000002508	A1CF	100	94.276	Pan_troglodytes
ENSPTIG00000021223	A1CF	100	93.919	ENSPANG00000021988	A1CF	100	93.919	Papio_anubis
ENSPTIG00000021223	A1CF	100	79.833	ENSPKIG00000025176	a1cf	100	79.599	Paramormyrops_kingsleyae
ENSPTIG00000021223	A1CF	100	86.172	ENSPSIG00000010318	A1CF	100	85.835	Pelodiscus_sinensis
ENSPTIG00000021223	A1CF	89	71.238	ENSPMGG00000013359	a1cf	99	67.410	Periophthalmus_magnuspinnatus
ENSPTIG00000021223	A1CF	100	92.605	ENSPEMG00000015021	A1cf	100	91.765	Peromyscus_maniculatus_bairdii
ENSPTIG00000021223	A1CF	100	88.533	ENSPCIG00000002175	A1CF	100	88.196	Phascolarctos_cinereus
ENSPTIG00000021223	A1CF	100	75.570	ENSPFOG00000007437	-	100	76.461	Poecilia_formosa
ENSPTIG00000021223	A1CF	100	75.733	ENSPFOG00000006683	a1cf	100	76.623	Poecilia_formosa
ENSPTIG00000021223	A1CF	100	74.430	ENSPLAG00000001210	-	100	75.325	Poecilia_latipinna
ENSPTIG00000021223	A1CF	100	74.430	ENSPLAG00000000026	a1cf	100	75.325	Poecilia_latipinna
ENSPTIG00000021223	A1CF	100	66.993	ENSPMEG00000000921	a1cf	100	68.137	Poecilia_mexicana
ENSPTIG00000021223	A1CF	100	68.137	ENSPMEG00000015529	-	100	69.281	Poecilia_mexicana
ENSPTIG00000021223	A1CF	100	75.570	ENSPREG00000016298	a1cf	100	76.547	Poecilia_reticulata
ENSPTIG00000021223	A1CF	100	93.782	ENSPPYG00000002819	A1CF	100	93.109	Pongo_abelii
ENSPTIG00000021223	A1CF	79	72.669	ENSPCAG00000006463	A1CF	70	89.362	Procavia_capensis
ENSPTIG00000021223	A1CF	100	93.960	ENSPCOG00000024172	A1CF	100	93.624	Propithecus_coquereli
ENSPTIG00000021223	A1CF	100	75.367	ENSPNYG00000017944	a1cf	100	76.509	Pundamilia_nyererei
ENSPTIG00000021223	A1CF	100	79.636	ENSPNAG00000007704	a1cf	100	78.974	Pygocentrus_nattereri
ENSPTIG00000021223	A1CF	100	89.916	ENSRNOG00000033195	A1cf	100	89.580	Rattus_norvegicus
ENSPTIG00000021223	A1CF	100	88.721	ENSRBIG00000042892	A1CF	100	91.929	Rhinopithecus_bieti
ENSPTIG00000021223	A1CF	100	95.270	ENSRROG00000041398	A1CF	100	95.270	Rhinopithecus_roxellana
ENSPTIG00000021223	A1CF	100	94.958	ENSSBOG00000021930	A1CF	100	94.286	Saimiri_boliviensis_boliviensis
ENSPTIG00000021223	A1CF	100	89.207	ENSSHAG00000005096	A1CF	100	89.207	Sarcophilus_harrisii
ENSPTIG00000021223	A1CF	100	78.773	ENSSFOG00015011774	a1cf	100	78.607	Scleropages_formosus
ENSPTIG00000021223	A1CF	100	74.593	ENSSMAG00000013271	a1cf	100	74.267	Scophthalmus_maximus
ENSPTIG00000021223	A1CF	100	75.456	ENSSDUG00000013930	a1cf	100	76.206	Seriola_dumerili
ENSPTIG00000021223	A1CF	100	70.132	ENSSLDG00000004290	a1cf	100	69.868	Seriola_lalandi_dorsalis
ENSPTIG00000021223	A1CF	95	82.867	ENSSARG00000005940	A1CF	97	82.343	Sorex_araneus
ENSPTIG00000021223	A1CF	95	86.396	ENSSPUG00000006797	A1CF	95	86.042	Sphenodon_punctatus
ENSPTIG00000021223	A1CF	100	94.622	ENSSSCG00000010431	A1CF	100	94.118	Sus_scrofa
ENSPTIG00000021223	A1CF	100	87.667	ENSTGUG00000005090	A1CF	100	87.291	Taeniopygia_guttata
ENSPTIG00000021223	A1CF	100	74.225	ENSTRUG00000001982	a1cf	100	73.453	Takifugu_rubripes
ENSPTIG00000021223	A1CF	100	74.309	ENSTNIG00000003580	a1cf	100	73.659	Tetraodon_nigroviridis
ENSPTIG00000021223	A1CF	100	84.884	ENSTTRG00000013190	A1CF	100	84.718	Tursiops_truncatus
ENSPTIG00000021223	A1CF	100	95.101	ENSUAMG00000020065	A1CF	100	95.101	Ursus_americanus
ENSPTIG00000021223	A1CF	100	95.946	ENSUMAG00000011162	A1CF	100	95.777	Ursus_maritimus
ENSPTIG00000021223	A1CF	87	88.868	ENSVPAG00000006130	A1CF	86	88.676	Vicugna_pacos
ENSPTIG00000021223	A1CF	100	95.608	ENSVVUG00000002504	A1CF	100	95.608	Vulpes_vulpes
ENSPTIG00000021223	A1CF	100	78.894	ENSXETG00000006611	a1cf	100	78.224	Xenopus_tropicalis
ENSPTIG00000021223	A1CF	100	75.574	ENSXCOG00000003302	a1cf	100	76.230	Xiphophorus_couchianus
ENSPTIG00000021223	A1CF	100	76.721	ENSXMAG00000016703	a1cf	100	77.377	Xiphophorus_maculatus