EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000021231 (Gene tree)
Gene ID: 102963468
Gene Symbol: MBD1
Alias: -
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 14727 bases
Position: chrKE721737.1:10920060-10934786
Accession: 102963468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000025658	MBD	PF01429.19	2.3e-16	1	1
ENSPTIP00000025671	MBD	PF01429.19	2.4e-16	1	1
ENSPTIP00000025683	MBD	PF01429.19	2.6e-16	1	1
ENSPTIP00000025656	MBD	PF01429.19	2.7e-16	1	1
ENSPTIP00000025645	MBD	PF01429.19	2.9e-16	1	1
ENSPTIP00000025677	MBD	PF01429.19	3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000030208	MBD1-205	1974	XM_007080514	ENSPTIP00000025677	657 (aa)	XP_007080576	-
ENSPTIT00000030202	MBD1-204	1689	-	ENSPTIP00000025671	562 (aa)	-	-
ENSPTIT00000030214	MBD1-206	1707	-	ENSPTIP00000025683	568 (aa)	-	-
ENSPTIT00000030189	MBD1-203	3467	XM_007080527	ENSPTIP00000025658	538 (aa)	XP_007080589	UPI00042BACD5
ENSPTIT00000030175	MBD1-201	3749	XM_007080517	ENSPTIP00000025645	632 (aa)	XP_007080579	UPI00042BFAB3
ENSPTIT00000030187	MBD1-202	3674	XM_007080523	ENSPTIP00000025656	607 (aa)	XP_007080585	UPI00042BD5F9

Gene Model

Click here to download ENSPTIG00000021231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000021231's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000021231	MBD1	100	87.975	ENSG00000141644	MBD1	100	88.468	Homo_sapiens
ENSPTIG00000021231	MBD1	100	96.677	ENSAMEG00000000238	MBD1	96	96.677	Ailuropoda_melanoleuca
ENSPTIG00000021231	MBD1	74	32.489	ENSACIG00000010590	mbd1b	52	31.984	Amphilophus_citrinellus
ENSPTIG00000021231	MBD1	51	50.562	ENSAOCG00000020272	mbd1b	52	32.401	Amphiprion_ocellaris
ENSPTIG00000021231	MBD1	51	50.562	ENSAPEG00000023230	mbd1b	52	32.018	Amphiprion_percula
ENSPTIG00000021231	MBD1	73	30.787	ENSATEG00000009608	mbd1b	52	31.963	Anabas_testudineus
ENSPTIG00000021231	MBD1	67	43.564	ENSACAG00000006091	-	100	44.068	Anolis_carolinensis
ENSPTIG00000021231	MBD1	100	87.025	ENSANAG00000036253	MBD1	100	87.500	Aotus_nancymaae
ENSPTIG00000021231	MBD1	59	36.782	ENSACLG00000021383	mbd1b	50	34.649	Astatotilapia_calliptera
ENSPTIG00000021231	MBD1	100	89.715	ENSBTAG00000003801	MBD1	100	89.241	Bos_taurus
ENSPTIG00000021231	MBD1	100	86.301	ENSCJAG00000004959	MBD1	100	86.758	Callithrix_jacchus
ENSPTIG00000021231	MBD1	100	95.253	ENSCAFG00000018928	MBD1	96	95.253	Canis_familiaris
ENSPTIG00000021231	MBD1	99	94.551	ENSCAFG00020024272	MBD1	97	94.551	Canis_lupus_dingo
ENSPTIG00000021231	MBD1	100	89.241	ENSCHIG00000021134	MBD1	100	88.924	Capra_hircus
ENSPTIG00000021231	MBD1	100	88.133	ENSTSYG00000000509	MBD1	100	87.658	Carlito_syrichta
ENSPTIG00000021231	MBD1	99	66.084	ENSCAPG00000015782	MBD1	96	65.734	Cavia_aperea
ENSPTIG00000021231	MBD1	98	71.838	ENSCPOG00000001671	MBD1	100	71.273	Cavia_porcellus
ENSPTIG00000021231	MBD1	100	84.814	ENSCCAG00000034600	MBD1	100	85.236	Cebus_capucinus
ENSPTIG00000021231	MBD1	100	88.303	ENSCATG00000029959	MBD1	100	88.797	Cercocebus_atys
ENSPTIG00000021231	MBD1	100	85.285	ENSCLAG00000007457	MBD1	89	84.968	Chinchilla_lanigera
ENSPTIG00000021231	MBD1	100	88.138	ENSCSAG00000018070	MBD1	100	88.633	Chlorocebus_sabaeus
ENSPTIG00000021231	MBD1	100	88.138	ENSCANG00000033425	MBD1	100	88.633	Colobus_angolensis_palliatus
ENSPTIG00000021231	MBD1	100	74.468	ENSCGRG00001014843	Mbd1	100	73.977	Cricetulus_griseus_chok1gshd
ENSPTIG00000021231	MBD1	99	62.039	ENSCGRG00000014135	Mbd1	96	61.687	Cricetulus_griseus_crigri
ENSPTIG00000021231	MBD1	100	82.437	ENSDNOG00000015998	MBD1	100	83.544	Dasypus_novemcinctus
ENSPTIG00000021231	MBD1	99	70.951	ENSDORG00000013917	Mbd1	97	78.116	Dipodomys_ordii
ENSPTIG00000021231	MBD1	100	92.089	ENSEASG00005003857	MBD1	100	92.089	Equus_asinus_asinus
ENSPTIG00000021231	MBD1	100	91.763	ENSECAG00000011497	MBD1	80	91.763	Equus_caballus
ENSPTIG00000021231	MBD1	100	99.684	ENSFCAG00000015730	MBD1	100	99.684	Felis_catus
ENSPTIG00000021231	MBD1	99	80.107	ENSFDAG00000011085	MBD1	96	79.751	Fukomys_damarensis
ENSPTIG00000021231	MBD1	71	35.354	ENSFHEG00000020120	mbd1b	51	35.294	Fundulus_heteroclitus
ENSPTIG00000021231	MBD1	73	33.333	ENSGACG00000012106	-	70	32.609	Gasterosteus_aculeatus
ENSPTIG00000021231	MBD1	100	87.975	ENSGGOG00000016966	MBD1	100	88.468	Gorilla_gorilla
ENSPTIG00000021231	MBD1	60	33.085	ENSHBUG00000014270	mbd1b	50	34.211	Haplochromis_burtoni
ENSPTIG00000021231	MBD1	100	84.652	ENSHGLG00000008740	MBD1	100	84.335	Heterocephalus_glaber_female
ENSPTIG00000021231	MBD1	92	88.312	ENSHGLG00100005198	MBD1	100	84.570	Heterocephalus_glaber_male
ENSPTIG00000021231	MBD1	67	35.784	ENSHCOG00000009952	mbd1b	52	34.404	Hippocampus_comes
ENSPTIG00000021231	MBD1	60	40.397	ENSIPUG00000015243	-	50	39.735	Ictalurus_punctatus
ENSPTIG00000021231	MBD1	100	82.496	ENSSTOG00000007780	MBD1	100	82.658	Ictidomys_tridecemlineatus
ENSPTIG00000021231	MBD1	98	71.201	ENSJJAG00000022859	Mbd1	96	71.731	Jaculus_jaculus
ENSPTIG00000021231	MBD1	96	36.952	ENSLACG00000002414	-	52	62.500	Latimeria_chalumnae
ENSPTIG00000021231	MBD1	99	76.821	ENSLAFG00000031328	MBD1	98	77.377	Loxodonta_africana
ENSPTIG00000021231	MBD1	100	88.797	ENSMFAG00000026335	MBD1	100	88.303	Macaca_fascicularis
ENSPTIG00000021231	MBD1	100	88.766	ENSMMUG00000009050	MBD1	100	88.291	Macaca_mulatta
ENSPTIG00000021231	MBD1	100	88.797	ENSMNEG00000038822	MBD1	100	88.303	Macaca_nemestrina
ENSPTIG00000021231	MBD1	100	88.138	ENSMLEG00000043121	MBD1	100	88.633	Mandrillus_leucophaeus
ENSPTIG00000021231	MBD1	67	33.971	ENSMAMG00000023341	-	64	36.058	Mastacembelus_armatus
ENSPTIG00000021231	MBD1	59	36.782	ENSMZEG00005010421	mbd1b	50	34.649	Maylandia_zebra
ENSPTIG00000021231	MBD1	54	75.945	ENSMAUG00000021798	-	95	81.749	Mesocricetus_auratus
ENSPTIG00000021231	MBD1	100	86.851	ENSMICG00000006414	MBD1	100	87.013	Microcebus_murinus
ENSPTIG00000021231	MBD1	52	74.558	ENSMOCG00000011976	-	93	78.707	Microtus_ochrogaster
ENSPTIG00000021231	MBD1	68	44.961	ENSMODG00000001286	-	57	44.935	Monodelphis_domestica
ENSPTIG00000021231	MBD1	99	67.302	ENSMUSG00000024561	Mbd1	97	66.561	Mus_musculus
ENSPTIG00000021231	MBD1	100	67.512	MGP_PahariEiJ_G0019128	Mbd1	100	67.987	Mus_pahari
ENSPTIG00000021231	MBD1	98	68.770	MGP_SPRETEiJ_G0023304	Mbd1	99	67.961	Mus_spretus
ENSPTIG00000021231	MBD1	100	95.570	ENSMPUG00000008843	MBD1	96	95.570	Mustela_putorius_furo
ENSPTIG00000021231	MBD1	100	90.348	ENSMLUG00000008286	MBD1	96	89.873	Myotis_lucifugus
ENSPTIG00000021231	MBD1	98	69.671	ENSNGAG00000011412	Mbd1	96	69.151	Nannospalax_galili
ENSPTIG00000021231	MBD1	100	88.468	ENSNLEG00000011661	-	100	87.974	Nomascus_leucogenys
ENSPTIG00000021231	MBD1	98	72.824	ENSNLEG00000032711	-	100	66.819	Nomascus_leucogenys
ENSPTIG00000021231	MBD1	100	73.641	ENSOPRG00000007647	MBD1	88	95.745	Ochotona_princeps
ENSPTIG00000021231	MBD1	99	75.880	ENSODEG00000018451	MBD1	97	76.585	Octodon_degus
ENSPTIG00000021231	MBD1	59	36.782	ENSONIG00000020289	mbd1b	52	33.025	Oreochromis_niloticus
ENSPTIG00000021231	MBD1	85	46.396	ENSOANG00000014593	-	100	49.245	Ornithorhynchus_anatinus
ENSPTIG00000021231	MBD1	100	84.019	ENSOCUG00000006554	MBD1	100	84.019	Oryctolagus_cuniculus
ENSPTIG00000021231	MBD1	100	85.179	ENSOGAG00000003784	MBD1	96	85.179	Otolemur_garnettii
ENSPTIG00000021231	MBD1	100	89.100	ENSOARG00000004218	MBD1	95	88.784	Ovis_aries
ENSPTIG00000021231	MBD1	100	87.809	ENSPPAG00000038886	MBD1	100	88.468	Pan_paniscus
ENSPTIG00000021231	MBD1	100	99.842	ENSPPRG00000021387	MBD1	100	99.842	Panthera_pardus
ENSPTIG00000021231	MBD1	100	87.816	ENSPTRG00000010021	MBD1	100	88.468	Pan_troglodytes
ENSPTIG00000021231	MBD1	100	87.975	ENSPANG00000010867	MBD1	100	88.449	Papio_anubis
ENSPTIG00000021231	MBD1	99	63.435	ENSPEMG00000022630	Mbd1	97	63.373	Peromyscus_maniculatus_bairdii
ENSPTIG00000021231	MBD1	96	47.735	ENSPCIG00000027937	-	79	47.644	Phascolarctos_cinereus
ENSPTIG00000021231	MBD1	61	53.846	ENSPMEG00000024145	mbd1b	52	51.546	Poecilia_mexicana
ENSPTIG00000021231	MBD1	100	89.127	ENSPPYG00000009158	MBD1	91	88.633	Pongo_abelii
ENSPTIG00000021231	MBD1	99	78.878	ENSPCAG00000001648	MBD1	93	88.258	Procavia_capensis
ENSPTIG00000021231	MBD1	100	88.962	ENSPCOG00000012450	MBD1	100	88.962	Propithecus_coquereli
ENSPTIG00000021231	MBD1	99	52.019	ENSRNOG00000024104	Mbd1	99	51.541	Rattus_norvegicus
ENSPTIG00000021231	MBD1	100	85.231	ENSRBIG00000041294	MBD1	98	86.972	Rhinopithecus_bieti
ENSPTIG00000021231	MBD1	100	87.658	ENSRROG00000032517	MBD1	100	88.138	Rhinopithecus_roxellana
ENSPTIG00000021231	MBD1	100	86.910	ENSSBOG00000027169	MBD1	100	86.454	Saimiri_boliviensis_boliviensis
ENSPTIG00000021231	MBD1	82	43.777	ENSSHAG00000003661	-	100	46.596	Sarcophilus_harrisii
ENSPTIG00000021231	MBD1	53	46.939	ENSSPAG00000021447	mbd1b	56	31.120	Stegastes_partitus
ENSPTIG00000021231	MBD1	100	90.520	ENSSSCG00000004516	MBD1	100	89.963	Sus_scrofa
ENSPTIG00000021231	MBD1	74	33.333	ENSTRUG00000013422	mbd1b	52	32.787	Takifugu_rubripes
ENSPTIG00000021231	MBD1	73	81.013	ENSTBEG00000012651	-	68	81.667	Tupaia_belangeri
ENSPTIG00000021231	MBD1	100	88.633	ENSTTRG00000015523	MBD1	100	88.633	Tursiops_truncatus
ENSPTIG00000021231	MBD1	100	93.081	ENSUAMG00000004752	MBD1	100	93.081	Ursus_americanus
ENSPTIG00000021231	MBD1	100	96.540	ENSUMAG00000002947	MBD1	100	96.540	Ursus_maritimus