EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTIG00000021240 (Gene tree)
Gene ID
102949088
Gene Symbol
RBMS1
Alias
-
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Panthera_tigris_altaica
Status
putative
Strand
Plus strand
Length
214313 bases
Position
chrKE721711.1:3165093-3379405
Accession
102949088
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTIP00000025502RRM_1PF00076.223.4e-3312
ENSPTIP00000025502RRM_1PF00076.223.4e-3322
ENSPTIP00000025495RRM_1PF00076.224.6e-3312
ENSPTIP00000025495RRM_1PF00076.224.6e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTIT00000030026RBMS1-2021369XM_007078459ENSPTIP00000025502370 (aa)XP_007078521UPI0005AC6976
ENSPTIT00000030019RBMS1-2011221-ENSPTIP00000025495406 (aa)--
Gene Model
Click here to download ENSPTIG00000021240's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000021240's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTIG00000021240RBMS19473.056ENSPTIG00000017925RBMS210068.198
ENSPTIG00000021240RBMS15437.674ENSPTIG00000005627ELAVL28334.483
ENSPTIG00000021240RBMS19474.317ENSPTIG00000011568RBMS38774.317
ENSPTIG00000021240RBMS15533.871ENSPTIG00000016727ELAVL47135.266
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTIG00000021240RBMS110098.378ENSG00000153250RBMS110098.425Homo_sapiens
ENSPTIG00000021240RBMS19577.620ENSAPOG00000024437-9473.003Acanthochromis_polyacanthus
ENSPTIG00000021240RBMS19765.278ENSAPOG00000013761rbms1a8965.994Acanthochromis_polyacanthus
ENSPTIG00000021240RBMS110097.861ENSAMEG00000012661RBMS19997.143Ailuropoda_melanoleuca
ENSPTIG00000021240RBMS19359.710ENSACIG00000000113rbms1a8960.000Amphilophus_citrinellus
ENSPTIG00000021240RBMS19576.487ENSACIG00000021498RBMS19477.394Amphilophus_citrinellus
ENSPTIG00000021240RBMS19765.556ENSAOCG00000010066rbms1a8966.377Amphiprion_ocellaris
ENSPTIG00000021240RBMS19577.337ENSAOCG00000014482-9578.158Amphiprion_ocellaris
ENSPTIG00000021240RBMS19577.054ENSAPEG00000018371-9577.895Amphiprion_percula
ENSPTIG00000021240RBMS19765.556ENSAPEG00000023563rbms1a8966.377Amphiprion_percula
ENSPTIG00000021240RBMS19576.771ENSATEG00000018573RBMS18977.273Anabas_testudineus
ENSPTIG00000021240RBMS19765.000ENSATEG00000015450rbms1a8965.706Anabas_testudineus
ENSPTIG00000021240RBMS19492.550ENSAPLG00000007282RBMS19692.126Anas_platyrhynchos
ENSPTIG00000021240RBMS110092.267ENSACAG00000011984RBMS17990.862Anolis_carolinensis
ENSPTIG00000021240RBMS18697.205ENSANAG00000024424RBMS110098.137Aotus_nancymaae
ENSPTIG00000021240RBMS19365.507ENSACLG00000021512rbms1a9065.797Astatotilapia_calliptera
ENSPTIG00000021240RBMS110075.603ENSACLG00000013048RBMS19476.064Astatotilapia_calliptera
ENSPTIG00000021240RBMS19473.011ENSAMXG00000002146rbms1a8873.864Astyanax_mexicanus
ENSPTIG00000021240RBMS110077.273ENSAMXG00000009969RBMS19478.409Astyanax_mexicanus
ENSPTIG00000021240RBMS110097.855ENSBTAG00000005180RBMS19498.688Bos_taurus
ENSPTIG00000021240RBMS19991.530ENSCJAG00000022465-9790.741Callithrix_jacchus
ENSPTIG00000021240RBMS110098.108ENSCJAG00000014861-9697.375Callithrix_jacchus
ENSPTIG00000021240RBMS110095.135ENSCJAG00000012871-9994.149Callithrix_jacchus
ENSPTIG00000021240RBMS110098.660ENSCAFG00000009922RBMS19499.475Canis_familiaris
ENSPTIG00000021240RBMS110099.459ENSCAFG00020006120RBMS19498.688Canis_lupus_dingo
ENSPTIG00000021240RBMS110098.649ENSCHIG00000023380RBMS19497.900Capra_hircus
ENSPTIG00000021240RBMS110098.649ENSTSYG00000005584RBMS110098.649Carlito_syrichta
ENSPTIG00000021240RBMS110098.649ENSCPOG00000012310RBMS110093.955Cavia_porcellus
ENSPTIG00000021240RBMS110097.319ENSCCAG00000033841RBMS19998.163Cebus_capucinus
ENSPTIG00000021240RBMS110098.649ENSCATG00000043032RBMS110098.649Cercocebus_atys
ENSPTIG00000021240RBMS110098.919ENSCLAG00000003031RBMS110094.819Chinchilla_lanigera
ENSPTIG00000021240RBMS110097.855ENSCSAG00000015687RBMS19498.688Chlorocebus_sabaeus
ENSPTIG00000021240RBMS15098.020ENSCHOG00000001579RBMS16597.674Choloepus_hoffmanni
ENSPTIG00000021240RBMS19493.947ENSCPBG00000026455RBMS19593.947Chrysemys_picta_bellii
ENSPTIG00000021240RBMS110098.649ENSCANG00000042152RBMS110098.649Colobus_angolensis_palliatus
ENSPTIG00000021240RBMS110097.568ENSCGRG00001022833Rbms19496.850Cricetulus_griseus_chok1gshd
ENSPTIG00000021240RBMS110097.568ENSCGRG00000008824Rbms110092.947Cricetulus_griseus_crigri
ENSPTIG00000021240RBMS110073.333ENSCSEG00000010652RBMS19473.580Cynoglossus_semilaevis
ENSPTIG00000021240RBMS19762.778ENSCSEG00000000889rbms1a9063.401Cynoglossus_semilaevis
ENSPTIG00000021240RBMS110073.727ENSCVAG00000002027RBMS19675.568Cyprinodon_variegatus
ENSPTIG00000021240RBMS19765.556ENSCVAG00000014698rbms1a8965.988Cyprinodon_variegatus
ENSPTIG00000021240RBMS19472.727ENSDARG00000074023rbms1a8773.580Danio_rerio
ENSPTIG00000021240RBMS110093.830ENSDNOG00000040691RBMS110094.602Dasypus_novemcinctus
ENSPTIG00000021240RBMS110098.919ENSDORG00000007103Rbms19698.950Dipodomys_ordii
ENSPTIG00000021240RBMS19486.089ENSETEG00000012135RBMS110086.089Echinops_telfairi
ENSPTIG00000021240RBMS110097.855ENSEASG00005023132RBMS19498.688Equus_asinus_asinus
ENSPTIG00000021240RBMS110097.855ENSECAG00000019894RBMS19498.688Equus_caballus
ENSPTIG00000021240RBMS177100.000ENSEEUG00000005628RBMS173100.000Erinaceus_europaeus
ENSPTIG00000021240RBMS19569.405ENSELUG00000019328RBMS19470.789Esox_lucius
ENSPTIG00000021240RBMS19966.667ENSELUG00000018923rbms1a9468.857Esox_lucius
ENSPTIG00000021240RBMS1100100.000ENSFCAG00000012524RBMS1100100.000Felis_catus
ENSPTIG00000021240RBMS19492.837ENSFALG00000004440RBMS19492.837Ficedula_albicollis
ENSPTIG00000021240RBMS110099.189ENSFDAG00000015692RBMS110094.458Fukomys_damarensis
ENSPTIG00000021240RBMS19474.432ENSFHEG00000000720RBMS18975.000Fundulus_heteroclitus
ENSPTIG00000021240RBMS19765.278ENSFHEG00000005662rbms1a7982.166Fundulus_heteroclitus
ENSPTIG00000021240RBMS19063.265ENSGMOG00000000525rbms1a9962.535Gadus_morhua
ENSPTIG00000021240RBMS19492.837ENSGALG00000011132RBMS19592.388Gallus_gallus
ENSPTIG00000021240RBMS19765.556ENSGAFG00000011633rbms1a9566.282Gambusia_affinis
ENSPTIG00000021240RBMS19474.148ENSGAFG00000007708RBMS18874.716Gambusia_affinis
ENSPTIG00000021240RBMS19575.921ENSGACG00000005671RBMS18976.705Gasterosteus_aculeatus
ENSPTIG00000021240RBMS19760.638ENSGACG00000015174rbms1a9166.564Gasterosteus_aculeatus
ENSPTIG00000021240RBMS110093.298ENSGAGG00000007866RBMS19593.684Gopherus_agassizii
ENSPTIG00000021240RBMS19495.801ENSGGOG00000043756-9495.801Gorilla_gorilla
ENSPTIG00000021240RBMS110098.378ENSGGOG00000001264RBMS110098.378Gorilla_gorilla
ENSPTIG00000021240RBMS19365.507ENSHBUG00000004802rbms1a9065.797Haplochromis_burtoni
ENSPTIG00000021240RBMS18878.049ENSHBUG00000004516RBMS19278.917Haplochromis_burtoni
ENSPTIG00000021240RBMS110098.649ENSHGLG00000010387RBMS19698.425Heterocephalus_glaber_female
ENSPTIG00000021240RBMS110098.649ENSHGLG00100014105RBMS110093.703Heterocephalus_glaber_male
ENSPTIG00000021240RBMS19574.294ENSHCOG00000016668RBMS19474.801Hippocampus_comes
ENSPTIG00000021240RBMS19763.889ENSHCOG00000020097rbms1a8964.553Hippocampus_comes
ENSPTIG00000021240RBMS110079.088ENSIPUG00000014677RBMS19479.255Ictalurus_punctatus
ENSPTIG00000021240RBMS19473.011ENSIPUG00000010131RBMS18873.864Ictalurus_punctatus
ENSPTIG00000021240RBMS110098.919ENSSTOG00000012501RBMS110094.207Ictidomys_tridecemlineatus
ENSPTIG00000021240RBMS110098.649ENSJJAG00000016543Rbms110094.560Jaculus_jaculus
ENSPTIG00000021240RBMS19477.841ENSKMAG00000013911RBMS19478.191Kryptolebias_marmoratus
ENSPTIG00000021240RBMS19763.158ENSKMAG00000011839-8963.768Kryptolebias_marmoratus
ENSPTIG00000021240RBMS19576.487ENSLBEG00000005787RBMS19477.394Labrus_bergylta
ENSPTIG00000021240RBMS19765.278ENSLBEG00000025962rbms1a8965.994Labrus_bergylta
ENSPTIG00000021240RBMS110080.902ENSLACG00000004324RBMS19580.311Latimeria_chalumnae
ENSPTIG00000021240RBMS19584.136ENSLOCG00000008622rbms1a9484.840Lepisosteus_oculatus
ENSPTIG00000021240RBMS110098.378ENSLAFG00000017217RBMS19997.638Loxodonta_africana
ENSPTIG00000021240RBMS110098.649ENSMFAG00000000274RBMS110098.649Macaca_fascicularis
ENSPTIG00000021240RBMS110097.855ENSMMUG00000016825RBMS19998.688Macaca_mulatta
ENSPTIG00000021240RBMS110098.649ENSMNEG00000039425RBMS110098.649Macaca_nemestrina
ENSPTIG00000021240RBMS110098.378ENSMLEG00000031517RBMS110098.378Mandrillus_leucophaeus
ENSPTIG00000021240RBMS19763.056ENSMAMG00000005018rbms1a8963.689Mastacembelus_armatus
ENSPTIG00000021240RBMS19575.071ENSMAMG00000003159-9275.783Mastacembelus_armatus
ENSPTIG00000021240RBMS19365.507ENSMZEG00005005661rbms1a9065.797Maylandia_zebra
ENSPTIG00000021240RBMS18877.439ENSMZEG00005007313RBMS19178.287Maylandia_zebra
ENSPTIG00000021240RBMS19492.045ENSMGAG00000011054RBMS110091.793Meleagris_gallopavo
ENSPTIG00000021240RBMS110097.027ENSMAUG00000008550Rbms19496.325Mesocricetus_auratus
ENSPTIG00000021240RBMS110097.319ENSMICG00000008325RBMS19998.163Microcebus_murinus
ENSPTIG00000021240RBMS110096.757ENSMOCG00000022617Rbms110092.746Microtus_ochrogaster
ENSPTIG00000021240RBMS19575.921ENSMMOG00000003707RBMS19476.800Mola_mola
ENSPTIG00000021240RBMS18069.565ENSMMOG00000018249rbms1a8169.799Mola_mola
ENSPTIG00000021240RBMS19494.556ENSMODG00000005250RBMS19493.438Monodelphis_domestica
ENSPTIG00000021240RBMS19764.444ENSMALG00000014235rbms1a8965.130Monopterus_albus
ENSPTIG00000021240RBMS19077.612ENSMALG00000015715-8975.931Monopterus_albus
ENSPTIG00000021240RBMS110096.486MGP_CAROLIEiJ_G0023586Rbms19495.801Mus_caroli
ENSPTIG00000021240RBMS110096.486ENSMUSG00000026970Rbms19495.801Mus_musculus
ENSPTIG00000021240RBMS19495.989MGP_PahariEiJ_G0025037Rbms19495.538Mus_pahari
ENSPTIG00000021240RBMS110096.757MGP_SPRETEiJ_G0024508Rbms110092.746Mus_spretus
ENSPTIG00000021240RBMS110094.819ENSMPUG00000000539RBMS19494.207Mustela_putorius_furo
ENSPTIG00000021240RBMS110093.557ENSMLUG00000008762RBMS19592.982Myotis_lucifugus
ENSPTIG00000021240RBMS110098.108ENSNGAG00000013636Rbms19497.375Nannospalax_galili
ENSPTIG00000021240RBMS18168.000ENSNBRG00000020217rbms1a8568.333Neolamprologus_brichardi
ENSPTIG00000021240RBMS19572.238ENSNBRG00000015151RBMS19473.011Neolamprologus_brichardi
ENSPTIG00000021240RBMS110098.378ENSNLEG00000001667RBMS110098.378Nomascus_leucogenys
ENSPTIG00000021240RBMS18679.503ENSMEUG00000000746RBMS110080.435Notamacropus_eugenii
ENSPTIG00000021240RBMS19491.076ENSOPRG00000012431RBMS19491.076Ochotona_princeps
ENSPTIG00000021240RBMS110098.919ENSODEG00000013934RBMS110094.819Octodon_degus
ENSPTIG00000021240RBMS19365.507ENSONIG00000003329rbms1a8865.797Oreochromis_niloticus
ENSPTIG00000021240RBMS19575.637ENSONIG00000008934RBMS19476.596Oreochromis_niloticus
ENSPTIG00000021240RBMS15856.846ENSOANG00000004477-9957.377Ornithorhynchus_anatinus
ENSPTIG00000021240RBMS19493.963ENSOANG00000006166RBMS19693.963Ornithorhynchus_anatinus
ENSPTIG00000021240RBMS110097.568ENSOCUG00000017365RBMS18996.850Oryctolagus_cuniculus
ENSPTIG00000021240RBMS19076.190ENSORLG00000016818RBMS18974.788Oryzias_latipes
ENSPTIG00000021240RBMS19763.056ENSORLG00000003917rbms1a9063.689Oryzias_latipes
ENSPTIG00000021240RBMS19762.778ENSORLG00020018663rbms1a9063.478Oryzias_latipes_hni
ENSPTIG00000021240RBMS19075.893ENSORLG00020022335RBMS18974.504Oryzias_latipes_hni
ENSPTIG00000021240RBMS19763.056ENSORLG00015016556rbms1a9063.768Oryzias_latipes_hsok
ENSPTIG00000021240RBMS19076.488ENSORLG00015018208RBMS18975.071Oryzias_latipes_hsok
ENSPTIG00000021240RBMS19076.716ENSOMEG00000002394RBMS19472.222Oryzias_melastigma
ENSPTIG00000021240RBMS110096.533ENSOGAG00000002900RBMS110097.333Otolemur_garnettii
ENSPTIG00000021240RBMS110098.649ENSOARG00000006870RBMS110094.072Ovis_aries
ENSPTIG00000021240RBMS19493.466ENSPPAG00000036520-9994.415Pan_paniscus
ENSPTIG00000021240RBMS110097.587ENSPPAG00000040083RBMS19998.425Pan_paniscus
ENSPTIG00000021240RBMS1100100.000ENSPPRG00000005040RBMS1100100.000Panthera_pardus
ENSPTIG00000021240RBMS110097.587ENSPTRG00000052304RBMS19998.425Pan_troglodytes
ENSPTIG00000021240RBMS19495.538ENSPTRG00000039358-9995.538Pan_troglodytes
ENSPTIG00000021240RBMS110098.649ENSPANG00000001383RBMS19998.688Papio_anubis
ENSPTIG00000021240RBMS19577.841ENSPKIG00000012818rbms1a8878.977Paramormyrops_kingsleyae
ENSPTIG00000021240RBMS110078.667ENSPKIG00000001498rbms1a8879.603Paramormyrops_kingsleyae
ENSPTIG00000021240RBMS19494.269ENSPSIG00000010240RBMS19493.421Pelodiscus_sinensis
ENSPTIG00000021240RBMS19360.983ENSPMGG00000004341rbms1a9061.159Periophthalmus_magnuspinnatus
ENSPTIG00000021240RBMS18876.829ENSPMGG00000006310RBMS19568.466Periophthalmus_magnuspinnatus
ENSPTIG00000021240RBMS110097.838ENSPEMG00000009449Rbms19797.900Peromyscus_maniculatus_bairdii
ENSPTIG00000021240RBMS19494.556ENSPCIG00000018405RBMS19593.438Phascolarctos_cinereus
ENSPTIG00000021240RBMS19765.556ENSPFOG00000016116rbms1a8966.282Poecilia_formosa
ENSPTIG00000021240RBMS19474.716ENSPFOG00000017483RBMS19475.532Poecilia_formosa
ENSPTIG00000021240RBMS19765.556ENSPLAG00000013864rbms1a8966.282Poecilia_latipinna
ENSPTIG00000021240RBMS19474.432ENSPLAG00000000920RBMS18875.000Poecilia_latipinna
ENSPTIG00000021240RBMS19474.716ENSPMEG00000015838RBMS19475.532Poecilia_mexicana
ENSPTIG00000021240RBMS19765.556ENSPMEG00000016185rbms1a8966.282Poecilia_mexicana
ENSPTIG00000021240RBMS19474.716ENSPREG00000008146RBMS19475.266Poecilia_reticulata
ENSPTIG00000021240RBMS19765.556ENSPREG00000020161rbms1a8966.282Poecilia_reticulata
ENSPTIG00000021240RBMS110093.316ENSPPYG00000012879-9494.207Pongo_abelii
ENSPTIG00000021240RBMS19491.339ENSPCAG00000009673RBMS19491.339Procavia_capensis
ENSPTIG00000021240RBMS110098.378ENSPCOG00000027294RBMS110098.378Propithecus_coquereli
ENSPTIG00000021240RBMS18799.457ENSPVAG00000010429RBMS19485.302Pteropus_vampyrus
ENSPTIG00000021240RBMS19575.637ENSPNYG00000002643RBMS19476.596Pundamilia_nyererei
ENSPTIG00000021240RBMS110078.342ENSPNAG00000023479RBMS18879.545Pygocentrus_nattereri
ENSPTIG00000021240RBMS19472.727ENSPNAG00000010225rbms1a8873.580Pygocentrus_nattereri
ENSPTIG00000021240RBMS110096.757ENSRNOG00000008482Rbms19892.191Rattus_norvegicus
ENSPTIG00000021240RBMS110097.587ENSRBIG00000044262RBMS19998.168Rhinopithecus_bieti
ENSPTIG00000021240RBMS110097.855ENSRROG00000043108RBMS19998.688Rhinopithecus_roxellana
ENSPTIG00000021240RBMS110097.319ENSSBOG00000034705RBMS110098.123Saimiri_boliviensis_boliviensis
ENSPTIG00000021240RBMS19494.842ENSSHAG00000012271RBMS110088.889Sarcophilus_harrisii
ENSPTIG00000021240RBMS19480.857ENSSFOG00015022929rbms19381.501Scleropages_formosus
ENSPTIG00000021240RBMS19478.977ENSSFOG00015014493rbms1a9579.545Scleropages_formosus
ENSPTIG00000021240RBMS19575.637ENSSMAG00000012152RBMS18778.899Scophthalmus_maximus
ENSPTIG00000021240RBMS19365.217ENSSMAG00000012722rbms1a9565.418Scophthalmus_maximus
ENSPTIG00000021240RBMS19576.771ENSSDUG00000018803RBMS19477.660Seriola_dumerili
ENSPTIG00000021240RBMS19765.278ENSSDUG00000020602rbms1a9566.087Seriola_dumerili
ENSPTIG00000021240RBMS19576.487ENSSLDG00000016556RBMS19477.394Seriola_lalandi_dorsalis
ENSPTIG00000021240RBMS19765.278ENSSLDG00000009495rbms1a8966.087Seriola_lalandi_dorsalis
ENSPTIG00000021240RBMS19468.241ENSSARG00000011085RBMS19468.241Sorex_araneus
ENSPTIG00000021240RBMS19492.330ENSSPUG00000017163RBMS19493.182Sphenodon_punctatus
ENSPTIG00000021240RBMS19765.000ENSSPAG00000005371rbms1a8965.706Stegastes_partitus
ENSPTIG00000021240RBMS19577.620ENSSPAG00000000059RBMS19478.457Stegastes_partitus
ENSPTIG00000021240RBMS110098.919ENSSSCG00000015888RBMS19497.900Sus_scrofa
ENSPTIG00000021240RBMS19492.837ENSTGUG00000006606RBMS19492.388Taeniopygia_guttata
ENSPTIG00000021240RBMS19574.221ENSTRUG00000005466-9572.895Takifugu_rubripes
ENSPTIG00000021240RBMS19264.620ENSTRUG00000017155rbms1a8964.535Takifugu_rubripes
ENSPTIG00000021240RBMS110073.727ENSTNIG00000016496RBMS19776.420Tetraodon_nigroviridis
ENSPTIG00000021240RBMS19562.963ENSTNIG00000009477rbms1a9963.190Tetraodon_nigroviridis
ENSPTIG00000021240RBMS110086.863ENSTBEG00000016156RBMS110086.877Tupaia_belangeri
ENSPTIG00000021240RBMS110097.587ENSTTRG00000011058RBMS110098.425Tursiops_truncatus
ENSPTIG00000021240RBMS110098.919ENSUAMG00000022331RBMS19497.900Ursus_americanus
ENSPTIG00000021240RBMS110098.919ENSUMAG00000008605RBMS19898.163Ursus_maritimus
ENSPTIG00000021240RBMS19397.126ENSVPAG00000002716RBMS19498.034Vicugna_pacos
ENSPTIG00000021240RBMS110099.459ENSVVUG00000018682RBMS110099.459Vulpes_vulpes
ENSPTIG00000021240RBMS110083.155ENSXETG00000016204rbms19982.984Xenopus_tropicalis
ENSPTIG00000021240RBMS19763.056ENSXCOG00000001659rbms1a8963.768Xiphophorus_couchianus
ENSPTIG00000021240RBMS19474.432ENSXCOG00000000211RBMS19575.000Xiphophorus_couchianus
ENSPTIG00000021240RBMS19765.556ENSXMAG00000001802rbms1a8966.282Xiphophorus_maculatus
ENSPTIG00000021240RBMS19474.432ENSXMAG00000011405RBMS19475.000Xiphophorus_maculatus

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