EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000021242 (Gene tree)
Gene ID: 102962878
Gene Symbol: MRPS18C
Alias: -
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 4764 bases
Position: chrKE721614.1:12646495-12651258
Accession: 102962878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000025498	Ribosomal_S18	PF01084.20	1.1e-22	1	1
ENSPTIP00000025494	Ribosomal_S18	PF01084.20	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000030022	MRPS18C-202	638	XM_015542020	ENSPTIP00000025498	143 (aa)	XP_015397506	UPI00042BBA24
ENSPTIT00000030018	MRPS18C-201	568	XM_015542023	ENSPTIP00000025494	115 (aa)	XP_015397509	UPI00076632E1

Gene Model

Click here to download ENSPTIG00000021242's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000021242's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000021242	MRPS18C	100	83.333	ENSG00000163319	MRPS18C	100	83.333	Homo_sapiens
ENSPTIG00000021242	MRPS18C	100	78.472	ENSAMEG00000004915	MRPS18C	100	78.472	Ailuropoda_melanoleuca
ENSPTIG00000021242	MRPS18C	99	71.429	ENSANAG00000025323	-	94	71.429	Aotus_nancymaae
ENSPTIG00000021242	MRPS18C	100	71.528	ENSANAG00000028055	-	100	71.528	Aotus_nancymaae
ENSPTIG00000021242	MRPS18C	100	79.720	ENSBTAG00000018155	MRPS18C	100	79.720	Bos_taurus
ENSPTIG00000021242	MRPS18C	100	71.304	ENSBTAG00000049836	-	100	71.304	Bos_taurus
ENSPTIG00000021242	MRPS18C	100	83.333	ENSCJAG00000042247	MRPS18C	97	83.333	Callithrix_jacchus
ENSPTIG00000021242	MRPS18C	100	88.811	ENSCAFG00020010491	MRPS18C	100	88.811	Canis_lupus_dingo
ENSPTIG00000021242	MRPS18C	100	63.793	ENSCHIG00000016551	-	100	63.793	Capra_hircus
ENSPTIG00000021242	MRPS18C	91	85.385	ENSCHIG00000004461	-	91	85.385	Capra_hircus
ENSPTIG00000021242	MRPS18C	75	69.444	ENSCHIG00000019359	-	98	69.444	Capra_hircus
ENSPTIG00000021242	MRPS18C	100	69.231	ENSCHIG00000022740	-	100	69.231	Capra_hircus
ENSPTIG00000021242	MRPS18C	99	65.035	ENSCHIG00000018805	-	99	65.035	Capra_hircus
ENSPTIG00000021242	MRPS18C	100	82.517	ENSTSYG00000012924	MRPS18C	100	82.517	Carlito_syrichta
ENSPTIG00000021242	MRPS18C	100	79.861	ENSCPOG00000009198	MRPS18C	100	79.861	Cavia_porcellus
ENSPTIG00000021242	MRPS18C	99	68.531	ENSCCAG00000025155	-	95	68.531	Cebus_capucinus
ENSPTIG00000021242	MRPS18C	100	81.944	ENSCCAG00000026577	-	100	81.944	Cebus_capucinus
ENSPTIG00000021242	MRPS18C	100	72.222	ENSCCAG00000028283	-	100	72.222	Cebus_capucinus
ENSPTIG00000021242	MRPS18C	100	79.861	ENSCCAG00000019347	-	100	79.861	Cebus_capucinus
ENSPTIG00000021242	MRPS18C	100	84.028	ENSCATG00000040697	MRPS18C	100	84.028	Cercocebus_atys
ENSPTIG00000021242	MRPS18C	100	79.167	ENSCLAG00000017397	-	100	79.167	Chinchilla_lanigera
ENSPTIG00000021242	MRPS18C	100	79.452	ENSCLAG00000008205	-	100	79.452	Chinchilla_lanigera
ENSPTIG00000021242	MRPS18C	99	71.304	ENSCANG00000037347	-	97	71.304	Colobus_angolensis_palliatus
ENSPTIG00000021242	MRPS18C	100	71.329	ENSCANG00000041165	-	100	71.329	Colobus_angolensis_palliatus
ENSPTIG00000021242	MRPS18C	100	84.028	ENSCANG00000038907	MRPS18C	100	84.028	Colobus_angolensis_palliatus
ENSPTIG00000021242	MRPS18C	100	81.944	ENSCGRG00001000103	Mrps18c	100	81.944	Cricetulus_griseus_chok1gshd
ENSPTIG00000021242	MRPS18C	100	81.944	ENSCGRG00000002192	Mrps18c	100	81.944	Cricetulus_griseus_crigri
ENSPTIG00000021242	MRPS18C	99	78.873	ENSDORG00000012749	Mrps18c	100	78.873	Dipodomys_ordii
ENSPTIG00000021242	MRPS18C	100	55.634	ENSETEG00000012223	-	100	55.634	Echinops_telfairi
ENSPTIG00000021242	MRPS18C	100	88.811	ENSEASG00005013234	MRPS18C	100	88.811	Equus_asinus_asinus
ENSPTIG00000021242	MRPS18C	100	89.510	ENSECAG00000020387	MRPS18C	100	89.510	Equus_caballus
ENSPTIG00000021242	MRPS18C	100	62.238	ENSEEUG00000003504	MRPS18C	99	62.238	Erinaceus_europaeus
ENSPTIG00000021242	MRPS18C	100	98.601	ENSFCAG00000042464	MRPS18C	100	98.601	Felis_catus
ENSPTIG00000021242	MRPS18C	100	80.556	ENSFDAG00000000250	-	100	80.556	Fukomys_damarensis
ENSPTIG00000021242	MRPS18C	100	70.139	ENSFDAG00000008778	-	100	70.139	Fukomys_damarensis
ENSPTIG00000021242	MRPS18C	100	68.056	ENSGGOG00000008603	MRPS18C	100	68.056	Gorilla_gorilla
ENSPTIG00000021242	MRPS18C	100	65.517	ENSGGOG00000037903	-	100	65.517	Gorilla_gorilla
ENSPTIG00000021242	MRPS18C	100	70.435	ENSGGOG00000040785	-	100	70.435	Gorilla_gorilla
ENSPTIG00000021242	MRPS18C	100	80.822	ENSHGLG00000002953	-	100	80.822	Heterocephalus_glaber_female
ENSPTIG00000021242	MRPS18C	100	76.389	ENSHGLG00000020134	-	100	76.389	Heterocephalus_glaber_female
ENSPTIG00000021242	MRPS18C	100	75.694	ENSHGLG00000012671	-	98	75.694	Heterocephalus_glaber_female
ENSPTIG00000021242	MRPS18C	100	76.389	ENSHGLG00100019678	-	100	76.389	Heterocephalus_glaber_male
ENSPTIG00000021242	MRPS18C	100	80.822	ENSHGLG00100016235	-	100	80.822	Heterocephalus_glaber_male
ENSPTIG00000021242	MRPS18C	100	75.694	ENSHGLG00100015568	-	98	75.694	Heterocephalus_glaber_male
ENSPTIG00000021242	MRPS18C	100	81.944	ENSSTOG00000007989	MRPS18C	100	81.944	Ictidomys_tridecemlineatus
ENSPTIG00000021242	MRPS18C	100	65.217	ENSJJAG00000022437	Mrps18c	100	65.217	Jaculus_jaculus
ENSPTIG00000021242	MRPS18C	100	79.167	ENSLAFG00000001059	MRPS18C	100	79.167	Loxodonta_africana
ENSPTIG00000021242	MRPS18C	100	65.000	ENSMFAG00000041276	-	100	65.000	Macaca_fascicularis
ENSPTIG00000021242	MRPS18C	100	82.639	ENSMFAG00000003991	MRPS18C	100	82.639	Macaca_fascicularis
ENSPTIG00000021242	MRPS18C	100	74.306	ENSMMUG00000048717	-	100	74.306	Macaca_mulatta
ENSPTIG00000021242	MRPS18C	100	79.310	ENSMMUG00000015353	MRPS18C	100	79.310	Macaca_mulatta
ENSPTIG00000021242	MRPS18C	100	70.139	ENSMMUG00000039146	-	100	70.139	Macaca_mulatta
ENSPTIG00000021242	MRPS18C	100	82.639	ENSMNEG00000043663	MRPS18C	100	82.639	Macaca_nemestrina
ENSPTIG00000021242	MRPS18C	100	62.238	ENSMNEG00000018700	-	100	62.238	Macaca_nemestrina
ENSPTIG00000021242	MRPS18C	100	84.028	ENSMLEG00000038884	MRPS18C	100	84.028	Mandrillus_leucophaeus
ENSPTIG00000021242	MRPS18C	100	79.861	ENSMICG00000032609	-	100	79.861	Microcebus_murinus
ENSPTIG00000021242	MRPS18C	100	75.214	ENSMICG00000037615	-	100	75.214	Microcebus_murinus
ENSPTIG00000021242	MRPS18C	100	79.861	ENSMOCG00000015591	-	100	79.861	Microtus_ochrogaster
ENSPTIG00000021242	MRPS18C	100	78.472	ENSMOCG00000009898	-	100	78.472	Microtus_ochrogaster
ENSPTIG00000021242	MRPS18C	99	77.931	ENSMODG00000020773	MRPS18C	100	77.931	Monodelphis_domestica
ENSPTIG00000021242	MRPS18C	100	79.452	MGP_CAROLIEiJ_G0027458	Mrps18c	100	79.452	Mus_caroli
ENSPTIG00000021242	MRPS18C	100	77.397	ENSMUSG00000016833	Mrps18c	100	77.397	Mus_musculus
ENSPTIG00000021242	MRPS18C	100	80.137	MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	Mus_pahari
ENSPTIG00000021242	MRPS18C	83	77.869	MGP_SPRETEiJ_G0028455	Mrps18c	93	77.869	Mus_spretus
ENSPTIG00000021242	MRPS18C	100	77.622	ENSMLUG00000017057	MRPS18C	100	77.622	Myotis_lucifugus
ENSPTIG00000021242	MRPS18C	78	91.964	ENSNGAG00000015980	Mrps18c	100	79.861	Nannospalax_galili
ENSPTIG00000021242	MRPS18C	100	75.694	ENSNLEG00000018188	-	100	75.694	Nomascus_leucogenys
ENSPTIG00000021242	MRPS18C	100	83.333	ENSNLEG00000009119	MRPS18C	100	83.333	Nomascus_leucogenys
ENSPTIG00000021242	MRPS18C	69	75.758	ENSOPRG00000004113	MRPS18C	68	75.758	Ochotona_princeps
ENSPTIG00000021242	MRPS18C	100	79.452	ENSODEG00000007599	-	100	79.452	Octodon_degus
ENSPTIG00000021242	MRPS18C	100	80.556	ENSODEG00000020349	-	100	80.556	Octodon_degus
ENSPTIG00000021242	MRPS18C	100	81.119	ENSOARG00000002770	MRPS18C	100	81.119	Ovis_aries
ENSPTIG00000021242	MRPS18C	100	83.333	ENSPPAG00000037122	MRPS18C	100	83.333	Pan_paniscus
ENSPTIG00000021242	MRPS18C	100	67.241	ENSPPAG00000037400	-	100	67.241	Pan_paniscus
ENSPTIG00000021242	MRPS18C	100	99.301	ENSPPRG00000011089	MRPS18C	100	99.301	Panthera_pardus
ENSPTIG00000021242	MRPS18C	100	83.333	ENSPTRG00000016233	MRPS18C	100	83.333	Pan_troglodytes
ENSPTIG00000021242	MRPS18C	100	66.379	ENSPTRG00000047058	-	100	66.379	Pan_troglodytes
ENSPTIG00000021242	MRPS18C	100	70.139	ENSPANG00000034202	-	100	70.139	Papio_anubis
ENSPTIG00000021242	MRPS18C	100	83.333	ENSPANG00000033931	MRPS18C	100	83.333	Papio_anubis
ENSPTIG00000021242	MRPS18C	100	81.250	ENSPEMG00000008390	Mrps18c	100	81.250	Peromyscus_maniculatus_bairdii
ENSPTIG00000021242	MRPS18C	77	75.455	ENSPCIG00000000097	-	79	75.455	Phascolarctos_cinereus
ENSPTIG00000021242	MRPS18C	99	78.723	ENSPCIG00000005376	-	100	78.723	Phascolarctos_cinereus
ENSPTIG00000021242	MRPS18C	71	93.137	ENSPCIG00000019737	-	100	93.137	Phascolarctos_cinereus
ENSPTIG00000021242	MRPS18C	100	84.028	ENSPPYG00000025867	MRPS18C	100	84.028	Pongo_abelii
ENSPTIG00000021242	MRPS18C	99	77.622	ENSPPYG00000025835	-	100	77.622	Pongo_abelii
ENSPTIG00000021242	MRPS18C	100	77.778	ENSPCAG00000004975	MRPS18C	100	77.778	Procavia_capensis
ENSPTIG00000021242	MRPS18C	100	82.192	ENSPCOG00000017634	MRPS18C	100	82.192	Propithecus_coquereli
ENSPTIG00000021242	MRPS18C	69	79.592	ENSPVAG00000006439	MRPS18C	100	79.592	Pteropus_vampyrus
ENSPTIG00000021242	MRPS18C	100	77.397	ENSRNOG00000002178	Mrps18c	100	77.397	Rattus_norvegicus
ENSPTIG00000021242	MRPS18C	100	65.217	ENSRBIG00000031637	-	100	65.217	Rhinopithecus_bieti
ENSPTIG00000021242	MRPS18C	100	84.028	ENSRBIG00000041685	MRPS18C	100	84.028	Rhinopithecus_bieti
ENSPTIG00000021242	MRPS18C	100	75.524	ENSRBIG00000035023	-	100	75.524	Rhinopithecus_bieti
ENSPTIG00000021242	MRPS18C	100	64.348	ENSRROG00000030722	-	100	64.348	Rhinopithecus_roxellana
ENSPTIG00000021242	MRPS18C	100	75.524	ENSRROG00000033834	-	100	75.524	Rhinopithecus_roxellana
ENSPTIG00000021242	MRPS18C	100	84.028	ENSRROG00000044334	MRPS18C	100	84.028	Rhinopithecus_roxellana
ENSPTIG00000021242	MRPS18C	100	83.333	ENSSBOG00000027568	-	100	83.333	Saimiri_boliviensis_boliviensis
ENSPTIG00000021242	MRPS18C	100	64.336	ENSSBOG00000029234	-	100	64.336	Saimiri_boliviensis_boliviensis
ENSPTIG00000021242	MRPS18C	99	74.126	ENSSBOG00000022205	-	92	74.126	Saimiri_boliviensis_boliviensis
ENSPTIG00000021242	MRPS18C	86	75.000	ENSSBOG00000032292	-	90	75.000	Saimiri_boliviensis_boliviensis
ENSPTIG00000021242	MRPS18C	99	75.862	ENSSHAG00000007084	MRPS18C	100	75.862	Sarcophilus_harrisii
ENSPTIG00000021242	MRPS18C	100	86.014	ENSSSCG00000038042	MRPS18C	100	86.014	Sus_scrofa
ENSPTIG00000021242	MRPS18C	100	78.472	ENSTBEG00000012505	MRPS18C	100	78.472	Tupaia_belangeri
ENSPTIG00000021242	MRPS18C	100	86.014	ENSTTRG00000004897	MRPS18C	100	86.014	Tursiops_truncatus
ENSPTIG00000021242	MRPS18C	100	90.210	ENSUAMG00000012878	MRPS18C	100	90.210	Ursus_americanus
ENSPTIG00000021242	MRPS18C	100	90.210	ENSUMAG00000008829	MRPS18C	100	90.210	Ursus_maritimus
ENSPTIG00000021242	MRPS18C	100	83.916	ENSVPAG00000011358	MRPS18C	100	83.916	Vicugna_pacos
ENSPTIG00000021242	MRPS18C	100	89.510	ENSVVUG00000015672	MRPS18C	100	89.510	Vulpes_vulpes