EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000021305 (Gene tree)
Gene ID: 102970401
Gene Symbol: -
Alias: -
Full Name: serine and arginine rich splicing factor 4
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 28575 bases
Position: chrKE722320.1:237075-265649
Accession: 102970401
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000025601	RRM_1	PF00076.22	2.1e-31	1	2
ENSPTIP00000025601	RRM_1	PF00076.22	2.1e-31	2	2
ENSPTIP00000025612	RRM_1	PF00076.22	2.4e-31	1	2
ENSPTIP00000025612	RRM_1	PF00076.22	2.4e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000030129	-	2352	XM_007097892	ENSPTIP00000025601	467 (aa)	XP_007097954	-
ENSPTIT00000030141	-	1452	-	ENSPTIP00000025612	483 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000021305's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03040	Spliceosome	KEGG
ptg05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000021305's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000021305	-	51	52.174	ENSAMEG00000003710	SRSF6	99	56.471	Ailuropoda_melanoleuca
ENSPTIG00000021305	-	53	65.625	ENSACIG00000020091	-	95	73.228	Amphilophus_citrinellus
ENSPTIG00000021305	-	64	60.261	ENSACIG00000023658	-	55	80.899	Amphilophus_citrinellus
ENSPTIG00000021305	-	52	59.843	ENSCCAG00000018540	-	60	72.432	Cebus_capucinus
ENSPTIG00000021305	-	65	59.936	ENSFHEG00000023065	srsf6a	54	80.769	Fundulus_heteroclitus
ENSPTIG00000021305	-	64	57.468	ENSGACG00000006084	srsf6a	53	78.378	Gasterosteus_aculeatus
ENSPTIG00000021305	-	69	60.000	ENSHCOG00000002740	srsf6a	57	82.123	Hippocampus_comes
ENSPTIG00000021305	-	57	63.869	ENSKMAG00000011934	srsf6a	59	81.356	Kryptolebias_marmoratus
ENSPTIG00000021305	-	56	61.935	ENSLACG00000005466	SRSF6	54	82.162	Latimeria_chalumnae
ENSPTIG00000021305	-	64	78.595	ENSLACG00000009389	-	68	68.750	Latimeria_chalumnae
ENSPTIG00000021305	-	54	69.922	ENSONIG00000020247	-	53	81.111	Oreochromis_niloticus
ENSPTIG00000021305	-	73	59.259	ENSPKIG00000018463	-	89	76.042	Paramormyrops_kingsleyae
ENSPTIG00000021305	-	65	64.396	ENSPMGG00000014963	srsf6a	55	80.874	Periophthalmus_magnuspinnatus
ENSPTIG00000021305	-	91	80.942	ENSPCIG00000022430	-	92	80.813	Phascolarctos_cinereus
ENSPTIG00000021305	-	74	56.649	ENSSFOG00015019681	-	53	77.835	Scleropages_formosus
ENSPTIG00000021305	-	56	63.469	ENSSPAG00000002362	srsf6a	66	79.255	Stegastes_partitus