EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000021578 (Gene tree)
Gene ID: 102956506
Gene Symbol: SCAF4
Alias: -
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 39692 bases
Position: chrKE721981.1:868150-907841
Accession: 102956506
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000026012	RRM_1	PF00076.22	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000030559	SCAF4-201	3312	XM_015542056	ENSPTIP00000026012	1103 (aa)	XP_015397542	-

Gene Model

Click here to download ENSPTIG00000021578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000021578's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000021578	SCAF4	99	88.869	ENSG00000156304	SCAF4	99	91.029	Homo_sapiens
ENSPTIG00000021578	SCAF4	53	60.150	ENSAPOG00000019615	scaf4b	58	67.005	Acanthochromis_polyacanthus
ENSPTIG00000021578	SCAF4	74	94.194	ENSAMEG00000014987	SCAF4	98	94.194	Ailuropoda_melanoleuca
ENSPTIG00000021578	SCAF4	99	74.311	ENSAPLG00000002509	SCAF4	59	84.385	Anas_platyrhynchos
ENSPTIG00000021578	SCAF4	99	60.425	ENSACAG00000002569	SCAF4	51	84.146	Anolis_carolinensis
ENSPTIG00000021578	SCAF4	99	89.543	ENSANAG00000037494	SCAF4	99	90.598	Aotus_nancymaae
ENSPTIG00000021578	SCAF4	92	49.123	ENSAMXG00000008585	scaf4a	59	63.183	Astyanax_mexicanus
ENSPTIG00000021578	SCAF4	99	87.457	ENSBTAG00000018855	SCAF4	99	91.262	Bos_taurus
ENSPTIG00000021578	SCAF4	99	89.640	ENSCJAG00000008993	SCAF4	99	93.439	Callithrix_jacchus
ENSPTIG00000021578	SCAF4	99	94.583	ENSCAFG00000008863	SCAF4	99	94.583	Canis_familiaris
ENSPTIG00000021578	SCAF4	99	88.035	ENSCAFG00020026019	SCAF4	100	93.918	Canis_lupus_dingo
ENSPTIG00000021578	SCAF4	99	87.219	ENSCHIG00000008385	SCAF4	99	90.837	Capra_hircus
ENSPTIG00000021578	SCAF4	92	92.520	ENSTSYG00000011344	SCAF4	96	94.471	Carlito_syrichta
ENSPTIG00000021578	SCAF4	99	84.851	ENSCPOG00000012443	SCAF4	99	86.655	Cavia_porcellus
ENSPTIG00000021578	SCAF4	99	89.956	ENSCCAG00000033727	SCAF4	99	91.101	Cebus_capucinus
ENSPTIG00000021578	SCAF4	99	88.978	ENSCATG00000030379	SCAF4	100	90.334	Cercocebus_atys
ENSPTIG00000021578	SCAF4	99	86.061	ENSCLAG00000006298	SCAF4	100	87.489	Chinchilla_lanigera
ENSPTIG00000021578	SCAF4	99	88.559	ENSCSAG00000009438	SCAF4	99	90.447	Chlorocebus_sabaeus
ENSPTIG00000021578	SCAF4	99	89.035	ENSCANG00000029847	SCAF4	99	91.197	Colobus_angolensis_palliatus
ENSPTIG00000021578	SCAF4	67	85.271	ENSCGRG00001020821	Scaf4	65	87.922	Cricetulus_griseus_chok1gshd
ENSPTIG00000021578	SCAF4	68	84.467	ENSCGRG00000014360	Scaf4	100	79.517	Cricetulus_griseus_crigri
ENSPTIG00000021578	SCAF4	78	50.602	ENSCSEG00000019549	scaf4a	52	54.016	Cynoglossus_semilaevis
ENSPTIG00000021578	SCAF4	99	85.315	ENSDNOG00000019014	SCAF4	94	88.850	Dasypus_novemcinctus
ENSPTIG00000021578	SCAF4	96	74.864	ENSETEG00000000583	SCAF4	99	78.368	Echinops_telfairi
ENSPTIG00000021578	SCAF4	99	93.064	ENSEASG00005007756	SCAF4	99	93.064	Equus_asinus_asinus
ENSPTIG00000021578	SCAF4	99	92.982	ENSECAG00000014248	SCAF4	99	92.982	Equus_caballus
ENSPTIG00000021578	SCAF4	99	94.444	ENSFCAG00000002228	SCAF4	99	94.444	Felis_catus
ENSPTIG00000021578	SCAF4	99	84.668	ENSFDAG00000017780	SCAF4	100	86.690	Fukomys_damarensis
ENSPTIG00000021578	SCAF4	50	58.271	ENSFHEG00000007634	scaf4b	53	72.152	Fundulus_heteroclitus
ENSPTIG00000021578	SCAF4	99	75.755	ENSGALG00000033965	SCAF4	58	84.069	Gallus_gallus
ENSPTIG00000021578	SCAF4	90	89.385	ENSGGOG00000015557	SCAF4	99	92.415	Gorilla_gorilla
ENSPTIG00000021578	SCAF4	73	88.499	ENSHGLG00000010582	SCAF4	99	88.899	Heterocephalus_glaber_female
ENSPTIG00000021578	SCAF4	73	88.499	ENSHGLG00100009441	SCAF4	100	88.860	Heterocephalus_glaber_male
ENSPTIG00000021578	SCAF4	99	82.923	ENSSTOG00000004450	SCAF4	100	85.172	Ictidomys_tridecemlineatus
ENSPTIG00000021578	SCAF4	99	85.286	ENSJJAG00000019447	Scaf4	99	87.268	Jaculus_jaculus
ENSPTIG00000021578	SCAF4	95	56.479	ENSLOCG00000009162	scaf4a	58	67.534	Lepisosteus_oculatus
ENSPTIG00000021578	SCAF4	100	86.503	ENSLAFG00000010710	SCAF4	99	90.724	Loxodonta_africana
ENSPTIG00000021578	SCAF4	99	88.164	ENSMFAG00000037668	SCAF4	99	90.611	Macaca_fascicularis
ENSPTIG00000021578	SCAF4	99	88.077	ENSMMUG00000001712	SCAF4	99	89.782	Macaca_mulatta
ENSPTIG00000021578	SCAF4	99	88.673	ENSMNEG00000032966	SCAF4	99	90.619	Macaca_nemestrina
ENSPTIG00000021578	SCAF4	99	88.056	ENSMLEG00000039674	SCAF4	100	90.376	Mandrillus_leucophaeus
ENSPTIG00000021578	SCAF4	99	75.530	ENSMGAG00000014515	SCAF4	59	84.227	Meleagris_gallopavo
ENSPTIG00000021578	SCAF4	99	83.657	ENSMAUG00000013307	Scaf4	100	85.929	Mesocricetus_auratus
ENSPTIG00000021578	SCAF4	99	90.417	ENSMICG00000005256	SCAF4	100	92.164	Microcebus_murinus
ENSPTIG00000021578	SCAF4	99	82.281	ENSMOCG00000012087	Scaf4	99	84.595	Microtus_ochrogaster
ENSPTIG00000021578	SCAF4	99	80.986	ENSMODG00000021040	SCAF4	99	83.512	Monodelphis_domestica
ENSPTIG00000021578	SCAF4	99	84.291	MGP_CAROLIEiJ_G0020944	Scaf4	99	82.109	Mus_caroli
ENSPTIG00000021578	SCAF4	99	84.211	ENSMUSG00000022983	Scaf4	95	86.968	Mus_musculus
ENSPTIG00000021578	SCAF4	98	83.073	MGP_PahariEiJ_G0016649	Scaf4	99	80.513	Mus_pahari
ENSPTIG00000021578	SCAF4	99	78.778	MGP_SPRETEiJ_G0021850	Scaf4	99	82.578	Mus_spretus
ENSPTIG00000021578	SCAF4	99	92.000	ENSMPUG00000001078	SCAF4	99	92.000	Mustela_putorius_furo
ENSPTIG00000021578	SCAF4	99	76.376	ENSMLUG00000011472	SCAF4	76	82.902	Myotis_lucifugus
ENSPTIG00000021578	SCAF4	99	86.152	ENSNGAG00000005214	Scaf4	99	88.411	Nannospalax_galili
ENSPTIG00000021578	SCAF4	99	89.220	ENSNLEG00000003569	SCAF4	99	91.117	Nomascus_leucogenys
ENSPTIG00000021578	SCAF4	85	78.448	ENSOPRG00000007016	SCAF4	85	83.255	Ochotona_princeps
ENSPTIG00000021578	SCAF4	99	83.551	ENSOCUG00000008336	SCAF4	99	85.852	Oryctolagus_cuniculus
ENSPTIG00000021578	SCAF4	69	93.426	ENSOGAG00000014653	SCAF4	93	93.426	Otolemur_garnettii
ENSPTIG00000021578	SCAF4	99	86.701	ENSOARG00000013894	SCAF4	98	90.342	Ovis_aries
ENSPTIG00000021578	SCAF4	99	88.869	ENSPPAG00000028535	SCAF4	99	91.029	Pan_paniscus
ENSPTIG00000021578	SCAF4	99	94.611	ENSPPRG00000000635	SCAF4	100	94.611	Panthera_pardus
ENSPTIG00000021578	SCAF4	99	88.869	ENSPTRG00000013848	SCAF4	99	91.029	Pan_troglodytes
ENSPTIG00000021578	SCAF4	99	87.996	ENSPANG00000017332	SCAF4	99	90.306	Papio_anubis
ENSPTIG00000021578	SCAF4	65	63.464	ENSPKIG00000022408	scaf4a	89	66.512	Paramormyrops_kingsleyae
ENSPTIG00000021578	SCAF4	99	76.944	ENSPSIG00000014242	SCAF4	57	85.331	Pelodiscus_sinensis
ENSPTIG00000021578	SCAF4	62	88.158	ENSPCIG00000028183	SCAF4	91	81.664	Phascolarctos_cinereus
ENSPTIG00000021578	SCAF4	54	55.515	ENSPREG00000013510	scaf4b	52	71.975	Poecilia_reticulata
ENSPTIG00000021578	SCAF4	99	88.792	ENSPPYG00000011355	SCAF4	100	91.093	Pongo_abelii
ENSPTIG00000021578	SCAF4	93	93.985	ENSPCAG00000009998	SCAF4	99	78.609	Procavia_capensis
ENSPTIG00000021578	SCAF4	100	89.279	ENSPCOG00000018710	SCAF4	99	91.273	Propithecus_coquereli
ENSPTIG00000021578	SCAF4	99	88.358	ENSPVAG00000005220	SCAF4	99	92.205	Pteropus_vampyrus
ENSPTIG00000021578	SCAF4	78	56.250	ENSPNAG00000016892	scaf4a	59	64.407	Pygocentrus_nattereri
ENSPTIG00000021578	SCAF4	80	81.868	ENSRNOG00000002104	Scaf4	94	80.739	Rattus_norvegicus
ENSPTIG00000021578	SCAF4	99	88.298	ENSRBIG00000040007	SCAF4	61	91.324	Rhinopithecus_bieti
ENSPTIG00000021578	SCAF4	99	89.474	ENSRROG00000029488	SCAF4	99	91.461	Rhinopithecus_roxellana
ENSPTIG00000021578	SCAF4	99	81.041	ENSSHAG00000001581	SCAF4	99	83.304	Sarcophilus_harrisii
ENSPTIG00000021578	SCAF4	68	52.073	ENSSFOG00015006338	scaf4a	54	58.647	Scleropages_formosus
ENSPTIG00000021578	SCAF4	79	51.811	ENSSMAG00000017901	scaf4a	52	53.282	Scophthalmus_maximus
ENSPTIG00000021578	SCAF4	99	84.201	ENSSARG00000009994	SCAF4	99	87.303	Sorex_araneus
ENSPTIG00000021578	SCAF4	99	84.872	ENSSSCG00000021023	SCAF4	99	88.317	Sus_scrofa
ENSPTIG00000021578	SCAF4	76	70.410	ENSTGUG00000013464	SCAF4	57	85.382	Taeniopygia_guttata
ENSPTIG00000021578	SCAF4	51	58.333	ENSTRUG00000009536	-	63	58.065	Takifugu_rubripes
ENSPTIG00000021578	SCAF4	99	91.109	ENSTTRG00000010963	SCAF4	100	91.748	Tursiops_truncatus
ENSPTIG00000021578	SCAF4	99	88.344	ENSUAMG00000008860	SCAF4	99	92.192	Ursus_americanus
ENSPTIG00000021578	SCAF4	99	89.856	ENSUMAG00000016962	SCAF4	100	92.998	Ursus_maritimus
ENSPTIG00000021578	SCAF4	99	94.563	ENSVVUG00000002953	SCAF4	100	94.563	Vulpes_vulpes
ENSPTIG00000021578	SCAF4	99	55.556	ENSXETG00000007351	scaf4	62	66.377	Xenopus_tropicalis