EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000021854 (Gene tree)
Gene ID: 102953371
Gene Symbol: CHD9
Alias: -
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 151590 bases
Position: chrKE722261.1:1036281-1187870
Accession: 102953371
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000026457	ResIII	PF04851.15	2.1e-06	1	1
ENSPTIP00000026460	BRK	PF07533.16	8.9e-32	1	2
ENSPTIP00000026460	BRK	PF07533.16	8.9e-32	2	2
ENSPTIP00000026457	BRK	PF07533.16	1e-30	1	2
ENSPTIP00000026457	BRK	PF07533.16	1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000031025	CHD9-202	2802	-	ENSPTIP00000026460	933 (aa)	-	-
ENSPTIT00000031022	CHD9-201	8613	XM_015544169	ENSPTIP00000026457	2870 (aa)	XP_015399655	-

Gene Model

Click here to download ENSPTIG00000021854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000021854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000021854	CHD9	72	45.918	ENSPTIG00000011702	CHD7	94	53.472
ENSPTIG00000021854	CHD9	72	62.375	ENSPTIG00000011094	CHD6	79	61.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000021854	CHD9	100	94.967	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSPTIG00000021854	CHD9	84	69.689	ENSAPOG00000023034	chd9	98	68.224	Acanthochromis_polyacanthus
ENSPTIG00000021854	CHD9	100	97.038	ENSAMEG00000016232	CHD9	100	97.038	Ailuropoda_melanoleuca
ENSPTIG00000021854	CHD9	91	62.587	ENSACIG00000004097	chd9	73	60.423	Amphilophus_citrinellus
ENSPTIG00000021854	CHD9	91	61.268	ENSAOCG00000005487	chd9	99	67.981	Amphiprion_ocellaris
ENSPTIG00000021854	CHD9	91	61.268	ENSAPEG00000009859	chd9	98	67.940	Amphiprion_percula
ENSPTIG00000021854	CHD9	91	62.633	ENSATEG00000002748	chd9	100	60.279	Anabas_testudineus
ENSPTIG00000021854	CHD9	99	82.749	ENSAPLG00000002826	CHD9	74	84.327	Anas_platyrhynchos
ENSPTIG00000021854	CHD9	98	77.656	ENSACAG00000016150	CHD9	73	81.558	Anolis_carolinensis
ENSPTIG00000021854	CHD9	100	94.555	ENSANAG00000015630	CHD9	100	94.388	Aotus_nancymaae
ENSPTIG00000021854	CHD9	91	61.538	ENSACLG00000016899	chd9	99	60.604	Astatotilapia_calliptera
ENSPTIG00000021854	CHD9	98	61.754	ENSAMXG00000005652	chd9	68	73.851	Astyanax_mexicanus
ENSPTIG00000021854	CHD9	100	95.348	ENSBTAG00000002287	CHD9	100	95.245	Bos_taurus
ENSPTIG00000021854	CHD9	100	94.140	ENSCJAG00000001573	CHD9	100	94.380	Callithrix_jacchus
ENSPTIG00000021854	CHD9	100	97.037	ENSCAFG00000009699	CHD9	100	97.037	Canis_familiaris
ENSPTIG00000021854	CHD9	100	97.037	ENSCAFG00020002879	CHD9	100	97.037	Canis_lupus_dingo
ENSPTIG00000021854	CHD9	100	95.209	ENSTSYG00000007693	CHD9	100	95.209	Carlito_syrichta
ENSPTIG00000021854	CHD9	82	96.774	ENSCAPG00000011604	CHD9	81	78.673	Cavia_aperea
ENSPTIG00000021854	CHD9	100	90.922	ENSCPOG00000036544	CHD9	100	89.800	Cavia_porcellus
ENSPTIG00000021854	CHD9	100	93.797	ENSCCAG00000036178	CHD9	100	94.245	Cebus_capucinus
ENSPTIG00000021854	CHD9	100	94.178	ENSCATG00000036753	CHD9	100	94.213	Cercocebus_atys
ENSPTIG00000021854	CHD9	99	93.963	ENSCLAG00000007137	CHD9	99	96.647	Chinchilla_lanigera
ENSPTIG00000021854	CHD9	100	93.966	ENSCSAG00000005311	CHD9	100	94.249	Chlorocebus_sabaeus
ENSPTIG00000021854	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSPTIG00000021854	CHD9	99	84.386	ENSCPBG00000012459	CHD9	99	89.957	Chrysemys_picta_bellii
ENSPTIG00000021854	CHD9	100	94.730	ENSCANG00000030349	CHD9	100	94.764	Colobus_angolensis_palliatus
ENSPTIG00000021854	CHD9	99	91.108	ENSCGRG00001016150	Chd9	99	90.344	Cricetulus_griseus_chok1gshd
ENSPTIG00000021854	CHD9	99	91.108	ENSCGRG00000012850	Chd9	99	95.491	Cricetulus_griseus_crigri
ENSPTIG00000021854	CHD9	92	60.554	ENSCSEG00000009209	chd9	98	58.158	Cynoglossus_semilaevis
ENSPTIG00000021854	CHD9	85	69.844	ENSCVAG00000016195	chd9	73	61.737	Cyprinodon_variegatus
ENSPTIG00000021854	CHD9	98	60.915	ENSDARG00000074498	chd9	68	72.548	Danio_rerio
ENSPTIG00000021854	CHD9	100	93.228	ENSDNOG00000006045	CHD9	100	94.133	Dasypus_novemcinctus
ENSPTIG00000021854	CHD9	100	89.398	ENSDORG00000008523	-	100	91.324	Dipodomys_ordii
ENSPTIG00000021854	CHD9	92	100.000	ENSETEG00000009565	CHD9	94	87.807	Echinops_telfairi
ENSPTIG00000021854	CHD9	100	95.865	ENSEASG00005014832	CHD9	100	95.865	Equus_asinus_asinus
ENSPTIG00000021854	CHD9	100	95.763	ENSECAG00000011505	CHD9	100	95.763	Equus_caballus
ENSPTIG00000021854	CHD9	81	98.343	ENSEEUG00000014515	CHD9	86	98.343	Erinaceus_europaeus
ENSPTIG00000021854	CHD9	94	62.807	ENSELUG00000006031	chd9	90	69.629	Esox_lucius
ENSPTIG00000021854	CHD9	100	99.424	ENSFCAG00000022534	CHD9	100	99.424	Felis_catus
ENSPTIG00000021854	CHD9	98	81.101	ENSFALG00000013276	CHD9	99	86.292	Ficedula_albicollis
ENSPTIG00000021854	CHD9	100	93.694	ENSFDAG00000021037	CHD9	100	93.315	Fukomys_damarensis
ENSPTIG00000021854	CHD9	84	69.016	ENSFHEG00000006068	chd9	68	73.282	Fundulus_heteroclitus
ENSPTIG00000021854	CHD9	67	75.170	ENSGMOG00000006040	chd9	83	75.237	Gadus_morhua
ENSPTIG00000021854	CHD9	95	84.360	ENSGALG00000039178	CHD9	98	84.144	Gallus_gallus
ENSPTIG00000021854	CHD9	84	69.250	ENSGAFG00000010014	chd9	98	66.947	Gambusia_affinis
ENSPTIG00000021854	CHD9	91	60.140	ENSGACG00000016694	chd9	96	73.748	Gasterosteus_aculeatus
ENSPTIG00000021854	CHD9	98	81.104	ENSGAGG00000001048	-	98	82.440	Gopherus_agassizii
ENSPTIG00000021854	CHD9	100	94.797	ENSGGOG00000014816	CHD9	100	94.797	Gorilla_gorilla
ENSPTIG00000021854	CHD9	91	62.105	ENSHBUG00000023322	chd9	97	67.925	Haplochromis_burtoni
ENSPTIG00000021854	CHD9	100	93.522	ENSHGLG00000014938	CHD9	99	96.994	Heterocephalus_glaber_female
ENSPTIG00000021854	CHD9	100	91.597	ENSHGLG00100007620	-	100	92.507	Heterocephalus_glaber_male
ENSPTIG00000021854	CHD9	90	65.294	ENSHCOG00000000937	chd9	69	71.943	Hippocampus_comes
ENSPTIG00000021854	CHD9	92	62.774	ENSIPUG00000016448	chd9	97	63.869	Ictalurus_punctatus
ENSPTIG00000021854	CHD9	100	93.726	ENSSTOG00000022273	CHD9	99	97.341	Ictidomys_tridecemlineatus
ENSPTIG00000021854	CHD9	100	87.608	ENSJJAG00000015741	-	100	92.548	Jaculus_jaculus
ENSPTIG00000021854	CHD9	91	62.898	ENSKMAG00000016784	chd9	94	69.208	Kryptolebias_marmoratus
ENSPTIG00000021854	CHD9	91	61.268	ENSLBEG00000012077	chd9	98	67.080	Labrus_bergylta
ENSPTIG00000021854	CHD9	99	71.644	ENSLACG00000005557	CHD9	96	72.131	Latimeria_chalumnae
ENSPTIG00000021854	CHD9	98	65.714	ENSLOCG00000007225	chd9	68	78.695	Lepisosteus_oculatus
ENSPTIG00000021854	CHD9	100	93.800	ENSLAFG00000015374	CHD9	100	93.800	Loxodonta_africana
ENSPTIG00000021854	CHD9	100	94.764	ENSMFAG00000041354	CHD9	100	94.798	Macaca_fascicularis
ENSPTIG00000021854	CHD9	100	94.798	ENSMMUG00000016310	CHD9	100	94.833	Macaca_mulatta
ENSPTIG00000021854	CHD9	100	94.766	ENSMNEG00000031494	CHD9	100	95.067	Macaca_nemestrina
ENSPTIG00000021854	CHD9	100	94.798	ENSMLEG00000043219	CHD9	100	94.833	Mandrillus_leucophaeus
ENSPTIG00000021854	CHD9	91	60.915	ENSMAMG00000003909	chd9	97	60.732	Mastacembelus_armatus
ENSPTIG00000021854	CHD9	84	70.159	ENSMZEG00005006581	chd9	97	68.213	Maylandia_zebra
ENSPTIG00000021854	CHD9	98	81.953	ENSMGAG00000004642	CHD9	72	79.563	Meleagris_gallopavo
ENSPTIG00000021854	CHD9	95	87.839	ENSMAUG00000000526	-	98	89.169	Mesocricetus_auratus
ENSPTIG00000021854	CHD9	100	94.967	ENSMICG00000016679	CHD9	100	95.533	Microcebus_murinus
ENSPTIG00000021854	CHD9	98	89.172	ENSMOCG00000010691	-	98	91.071	Microtus_ochrogaster
ENSPTIG00000021854	CHD9	91	62.191	ENSMMOG00000016406	chd9	74	62.642	Mola_mola
ENSPTIG00000021854	CHD9	98	74.825	ENSMODG00000013142	-	99	90.493	Monodelphis_domestica
ENSPTIG00000021854	CHD9	97	60.492	ENSMALG00000013306	chd9	73	61.151	Monopterus_albus
ENSPTIG00000021854	CHD9	99	89.348	MGP_CAROLIEiJ_G0031364	Chd9	99	89.209	Mus_caroli
ENSPTIG00000021854	CHD9	99	88.924	ENSMUSG00000056608	Chd9	99	94.798	Mus_musculus
ENSPTIG00000021854	CHD9	99	87.314	MGP_PahariEiJ_G0022964	Chd9	99	87.175	Mus_pahari
ENSPTIG00000021854	CHD9	99	89.062	MGP_SPRETEiJ_G0032483	Chd9	99	88.889	Mus_spretus
ENSPTIG00000021854	CHD9	100	96.794	ENSMPUG00000003285	CHD9	100	96.794	Mustela_putorius_furo
ENSPTIG00000021854	CHD9	100	93.692	ENSMLUG00000004456	CHD9	100	93.347	Myotis_lucifugus
ENSPTIG00000021854	CHD9	100	89.212	ENSNGAG00000015820	-	100	90.778	Nannospalax_galili
ENSPTIG00000021854	CHD9	84	69.811	ENSNBRG00000009423	chd9	97	67.877	Neolamprologus_brichardi
ENSPTIG00000021854	CHD9	90	95.209	ENSNLEG00000001026	CHD9	100	95.209	Nomascus_leucogenys
ENSPTIG00000021854	CHD9	74	98.496	ENSMEUG00000008222	-	84	96.732	Notamacropus_eugenii
ENSPTIG00000021854	CHD9	87	100.000	ENSOPRG00000011168	CHD9	85	97.714	Ochotona_princeps
ENSPTIG00000021854	CHD9	99	93.095	ENSODEG00000004466	CHD9	99	92.922	Octodon_degus
ENSPTIG00000021854	CHD9	91	62.105	ENSONIG00000002816	chd9	99	68.959	Oreochromis_niloticus
ENSPTIG00000021854	CHD9	100	86.763	ENSOANG00000013401	CHD9	100	85.926	Ornithorhynchus_anatinus
ENSPTIG00000021854	CHD9	100	94.820	ENSOCUG00000001016	CHD9	99	95.904	Oryctolagus_cuniculus
ENSPTIG00000021854	CHD9	92	61.268	ENSORLG00000013810	chd9	67	72.939	Oryzias_latipes
ENSPTIG00000021854	CHD9	92	64.260	ENSORLG00020020665	chd9	75	61.859	Oryzias_latipes_hni
ENSPTIG00000021854	CHD9	92	61.672	ENSORLG00015019126	chd9	81	61.045	Oryzias_latipes_hsok
ENSPTIG00000021854	CHD9	100	94.380	ENSOGAG00000002110	CHD9	100	93.733	Otolemur_garnettii
ENSPTIG00000021854	CHD9	100	95.009	ENSOARG00000017664	CHD9	100	94.974	Ovis_aries
ENSPTIG00000021854	CHD9	100	94.092	ENSPPAG00000039388	-	100	94.689	Pan_paniscus
ENSPTIG00000021854	CHD9	100	99.280	ENSPPRG00000004801	CHD9	100	99.280	Panthera_pardus
ENSPTIG00000021854	CHD9	100	95.105	ENSPTRG00000008113	CHD9	100	95.105	Pan_troglodytes
ENSPTIG00000021854	CHD9	100	94.764	ENSPANG00000019307	CHD9	100	94.798	Papio_anubis
ENSPTIG00000021854	CHD9	94	62.590	ENSPKIG00000025401	-	71	61.819	Paramormyrops_kingsleyae
ENSPTIG00000021854	CHD9	97	62.114	ENSPKIG00000021876	chd9	68	75.329	Paramormyrops_kingsleyae
ENSPTIG00000021854	CHD9	63	83.243	ENSPSIG00000008099	CHD9	99	83.243	Pelodiscus_sinensis
ENSPTIG00000021854	CHD9	92	60.417	ENSPMGG00000021802	chd9	98	63.214	Periophthalmus_magnuspinnatus
ENSPTIG00000021854	CHD9	98	88.217	ENSPEMG00000021464	-	98	89.286	Peromyscus_maniculatus_bairdii
ENSPTIG00000021854	CHD9	63	52.747	ENSPMAG00000006035	-	72	65.809	Petromyzon_marinus
ENSPTIG00000021854	CHD9	89	86.651	ENSPCIG00000017215	CHD9	97	88.284	Phascolarctos_cinereus
ENSPTIG00000021854	CHD9	84	69.360	ENSPFOG00000015839	chd9	99	59.200	Poecilia_formosa
ENSPTIG00000021854	CHD9	84	69.444	ENSPLAG00000011118	chd9	98	67.648	Poecilia_latipinna
ENSPTIG00000021854	CHD9	84	69.812	ENSPMEG00000015106	chd9	99	59.584	Poecilia_mexicana
ENSPTIG00000021854	CHD9	84	70.483	ENSPREG00000006473	chd9	98	67.056	Poecilia_reticulata
ENSPTIG00000021854	CHD9	100	95.002	ENSPPYG00000007348	CHD9	100	95.002	Pongo_abelii
ENSPTIG00000021854	CHD9	77	96.324	ENSPCAG00000007564	CHD9	86	96.324	Procavia_capensis
ENSPTIG00000021854	CHD9	100	95.389	ENSPCOG00000028433	CHD9	100	95.389	Propithecus_coquereli
ENSPTIG00000021854	CHD9	97	95.192	ENSPVAG00000015617	CHD9	98	94.821	Pteropus_vampyrus
ENSPTIG00000021854	CHD9	84	70.201	ENSPNYG00000010947	chd9	66	74.092	Pundamilia_nyererei
ENSPTIG00000021854	CHD9	90	65.725	ENSPNAG00000024141	chd9	68	73.968	Pygocentrus_nattereri
ENSPTIG00000021854	CHD9	91	93.220	ENSRNOG00000049302	Chd9	100	89.460	Rattus_norvegicus
ENSPTIG00000021854	CHD9	100	94.109	ENSRBIG00000035553	CHD9	100	95.656	Rhinopithecus_bieti
ENSPTIG00000021854	CHD9	100	93.966	ENSRROG00000033278	CHD9	100	95.658	Rhinopithecus_roxellana
ENSPTIG00000021854	CHD9	100	94.487	ENSSBOG00000030240	CHD9	100	94.521	Saimiri_boliviensis_boliviensis
ENSPTIG00000021854	CHD9	99	87.219	ENSSHAG00000002719	CHD9	100	87.238	Sarcophilus_harrisii
ENSPTIG00000021854	CHD9	97	61.507	ENSSFOG00015001327	chd9	67	74.455	Scleropages_formosus
ENSPTIG00000021854	CHD9	97	62.820	ENSSFOG00015020209	chd9	69	74.836	Scleropages_formosus
ENSPTIG00000021854	CHD9	91	60.140	ENSSMAG00000008953	chd9	95	68.504	Scophthalmus_maximus
ENSPTIG00000021854	CHD9	91	62.676	ENSSDUG00000006139	chd9	95	68.665	Seriola_dumerili
ENSPTIG00000021854	CHD9	91	63.475	ENSSLDG00000017818	chd9	95	69.145	Seriola_lalandi_dorsalis
ENSPTIG00000021854	CHD9	100	91.763	ENSSARG00000010632	CHD9	71	95.377	Sorex_araneus
ENSPTIG00000021854	CHD9	98	83.333	ENSSPUG00000017465	-	98	84.226	Sphenodon_punctatus
ENSPTIG00000021854	CHD9	91	60.211	ENSSPAG00000021649	chd9	98	67.645	Stegastes_partitus
ENSPTIG00000021854	CHD9	90	84.383	ENSTGUG00000007476	CHD9	100	84.154	Taeniopygia_guttata
ENSPTIG00000021854	CHD9	97	63.214	ENSTRUG00000009125	chd9	73	61.790	Takifugu_rubripes
ENSPTIG00000021854	CHD9	57	81.951	ENSTNIG00000003825	chd9	86	81.951	Tetraodon_nigroviridis
ENSPTIG00000021854	CHD9	66	97.297	ENSTBEG00000016052	-	81	97.297	Tupaia_belangeri
ENSPTIG00000021854	CHD9	90	94.902	ENSTTRG00000012674	CHD9	90	94.902	Tursiops_truncatus
ENSPTIG00000021854	CHD9	100	94.676	ENSUAMG00000022706	CHD9	100	96.978	Ursus_americanus
ENSPTIG00000021854	CHD9	88	100.000	ENSUMAG00000004043	CHD9	99	98.721	Ursus_maritimus
ENSPTIG00000021854	CHD9	98	95.697	ENSVPAG00000001374	CHD9	97	95.026	Vicugna_pacos
ENSPTIG00000021854	CHD9	100	97.105	ENSVVUG00000019435	CHD9	100	97.105	Vulpes_vulpes
ENSPTIG00000021854	CHD9	99	72.715	ENSXETG00000000349	chd9	96	75.867	Xenopus_tropicalis
ENSPTIG00000021854	CHD9	91	61.131	ENSXCOG00000012997	chd9	95	69.389	Xiphophorus_couchianus
ENSPTIG00000021854	CHD9	84	69.739	ENSXMAG00000016192	chd9	99	68.310	Xiphophorus_maculatus