EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000021873 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 4166 bases
Position: chrKE721782.1:571541-575706
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000026464	RRM_1	PF00076.22	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000031030	-	732	-	ENSPTIP00000026464	243 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000021873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000021873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000021873	-	67	37.179	ENSPTIG00000012046	DAZAP1	53	37.179
ENSPTIG00000021873	-	63	41.860	ENSPTIG00000019833	HNRNPA2B1	66	41.860
ENSPTIG00000021873	-	53	44.275	ENSPTIG00000021727	HNRNPAB	76	42.657
ENSPTIG00000021873	-	77	36.364	ENSPTIG00000019051	-	96	36.364
ENSPTIG00000021873	-	63	39.362	ENSPTIG00000015170	HNRNPA1	67	39.362
ENSPTIG00000021873	-	80	69.849	ENSPTIG00000008913	MSI1	63	69.849
ENSPTIG00000021873	-	74	30.357	ENSPTIG00000021689	-	76	30.357
ENSPTIG00000021873	-	63	39.362	ENSPTIG00000016796	-	69	39.362
ENSPTIG00000021873	-	63	37.113	ENSPTIG00000008598	HNRNPA3	52	37.113
ENSPTIG00000021873	-	63	37.113	ENSPTIG00000014387	-	53	37.113
ENSPTIG00000021873	-	63	39.286	ENSPTIG00000006805	-	59	39.286
ENSPTIG00000021873	-	67	42.169	ENSPTIG00000019434	HNRNPD	70	39.175
ENSPTIG00000021873	-	65	39.665	ENSPTIG00000018505	HNRNPDL	75	35.931
ENSPTIG00000021873	-	87	82.667	ENSPTIG00000021678	MSI2	88	82.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000021873	-	99	77.559	ENSG00000153944	MSI2	100	86.538	Homo_sapiens
ENSPTIG00000021873	-	91	75.314	ENSAPOG00000001658	msi2a	78	75.314	Acanthochromis_polyacanthus
ENSPTIG00000021873	-	84	82.569	ENSAMEG00000002697	MSI2	68	82.569	Ailuropoda_melanoleuca
ENSPTIG00000021873	-	90	74.026	ENSACIG00000009475	msi2a	59	74.026	Amphilophus_citrinellus
ENSPTIG00000021873	-	78	66.667	ENSAOCG00000014822	msi2a	62	66.667	Amphiprion_ocellaris
ENSPTIG00000021873	-	90	75.527	ENSAPEG00000007706	msi2a	71	74.459	Amphiprion_percula
ENSPTIG00000021873	-	91	75.314	ENSATEG00000010498	msi2a	78	75.314	Anabas_testudineus
ENSPTIG00000021873	-	76	82.703	ENSATEG00000003301	-	70	79.592	Anabas_testudineus
ENSPTIG00000021873	-	99	77.953	ENSANAG00000037827	MSI2	99	77.953	Aotus_nancymaae
ENSPTIG00000021873	-	91	74.895	ENSACLG00000007752	msi2a	78	74.895	Astatotilapia_calliptera
ENSPTIG00000021873	-	93	76.050	ENSAMXG00000010474	msi2b	79	75.833	Astyanax_mexicanus
ENSPTIG00000021873	-	90	77.215	ENSAMXG00000032796	msi2a	72	77.215	Astyanax_mexicanus
ENSPTIG00000021873	-	93	77.731	ENSBTAG00000004406	MSI2	75	78.099	Bos_taurus
ENSPTIG00000021873	-	80	52.212	WBGene00003423	msi-1	70	52.212	Caenorhabditis_elegans
ENSPTIG00000021873	-	99	77.953	ENSCJAG00000013998	MSI2	99	77.953	Callithrix_jacchus
ENSPTIG00000021873	-	86	82.511	ENSCAFG00020025620	MSI2	75	82.456	Canis_lupus_dingo
ENSPTIG00000021873	-	88	80.172	ENSCHIG00000016580	MSI2	74	78.099	Capra_hircus
ENSPTIG00000021873	-	75	86.885	ENSCPOG00000034042	MSI2	65	86.885	Cavia_porcellus
ENSPTIG00000021873	-	99	77.953	ENSCCAG00000033927	MSI2	99	77.953	Cebus_capucinus
ENSPTIG00000021873	-	99	77.953	ENSCATG00000040879	MSI2	99	77.953	Cercocebus_atys
ENSPTIG00000021873	-	92	78.512	ENSCLAG00000014325	MSI2	70	78.512	Chinchilla_lanigera
ENSPTIG00000021873	-	92	78.512	ENSCSAG00000005633	MSI2	74	78.512	Chlorocebus_sabaeus
ENSPTIG00000021873	-	70	67.582	ENSCHOG00000008660	MSI2	65	67.582	Choloepus_hoffmanni
ENSPTIG00000021873	-	90	76.256	ENSCPBG00000009942	MSI2	94	80.000	Chrysemys_picta_bellii
ENSPTIG00000021873	-	51	65.873	ENSCING00000018579	-	61	61.702	Ciona_intestinalis
ENSPTIG00000021873	-	74	55.924	ENSCSAVG00000010397	-	78	51.822	Ciona_savignyi
ENSPTIG00000021873	-	99	77.953	ENSCANG00000036414	MSI2	99	77.953	Colobus_angolensis_palliatus
ENSPTIG00000021873	-	92	78.512	ENSCGRG00001013330	Msi2	74	78.512	Cricetulus_griseus_chok1gshd
ENSPTIG00000021873	-	84	82.569	ENSCGRG00000003141	Msi2	69	82.569	Cricetulus_griseus_crigri
ENSPTIG00000021873	-	85	67.692	ENSCSEG00000013549	msi2a	81	67.692	Cynoglossus_semilaevis
ENSPTIG00000021873	-	89	68.534	ENSCSEG00000003266	-	71	68.534	Cynoglossus_semilaevis
ENSPTIG00000021873	-	91	75.314	ENSCVAG00000017075	msi2a	78	75.314	Cyprinodon_variegatus
ENSPTIG00000021873	-	90	77.637	ENSDARG00000032614	msi2b	100	87.059	Danio_rerio
ENSPTIG00000021873	-	89	75.424	ENSDARG00000033901	msi2a	61	75.424	Danio_rerio
ENSPTIG00000021873	-	79	82.353	ENSDNOG00000014501	MSI2	71	82.353	Dasypus_novemcinctus
ENSPTIG00000021873	-	72	79.817	ENSDORG00000028440	-	100	79.817	Dipodomys_ordii
ENSPTIG00000021873	-	85	56.957	FBgn0260943	Rbp6	88	59.441	Drosophila_melanogaster
ENSPTIG00000021873	-	62	68.421	ENSETEG00000012450	-	64	68.421	Echinops_telfairi
ENSPTIG00000021873	-	88	64.758	ENSEBUG00000006732	msi2a	61	64.758	Eptatretus_burgeri
ENSPTIG00000021873	-	93	77.917	ENSEASG00005002965	MSI2	63	82.456	Equus_asinus_asinus
ENSPTIG00000021873	-	93	78.689	ENSECAG00000011435	MSI2	77	78.512	Equus_caballus
ENSPTIG00000021873	-	74	71.111	ENSEEUG00000007810	MSI2	72	71.111	Erinaceus_europaeus
ENSPTIG00000021873	-	93	76.050	ENSELUG00000011747	msi2a	82	75.833	Esox_lucius
ENSPTIG00000021873	-	91	74.274	ENSELUG00000001361	msi2b	86	64.138	Esox_lucius
ENSPTIG00000021873	-	56	79.730	ENSFCAG00000033787	-	81	79.730	Felis_catus
ENSPTIG00000021873	-	99	77.953	ENSFCAG00000041686	MSI2	99	77.953	Felis_catus
ENSPTIG00000021873	-	84	82.569	ENSFDAG00000016118	MSI2	69	82.569	Fukomys_damarensis
ENSPTIG00000021873	-	90	75.527	ENSFHEG00000000084	msi2a	92	71.034	Fundulus_heteroclitus
ENSPTIG00000021873	-	65	64.948	ENSGMOG00000007596	-	93	64.948	Gadus_morhua
ENSPTIG00000021873	-	90	78.481	ENSGALG00000005567	MSI2	68	78.481	Gallus_gallus
ENSPTIG00000021873	-	90	65.546	ENSGAFG00000006974	msi2a	86	71.528	Gambusia_affinis
ENSPTIG00000021873	-	90	75.630	ENSGAGG00000016542	MSI2	64	83.333	Gopherus_agassizii
ENSPTIG00000021873	-	99	77.559	ENSGGOG00000013182	MSI2	99	77.559	Gorilla_gorilla
ENSPTIG00000021873	-	91	74.895	ENSHBUG00000020800	msi2a	78	74.895	Haplochromis_burtoni
ENSPTIG00000021873	-	92	66.116	ENSHGLG00000012444	MSI2	74	66.337	Heterocephalus_glaber_female
ENSPTIG00000021873	-	72	78.378	ENSHGLG00100004028	-	88	78.378	Heterocephalus_glaber_male
ENSPTIG00000021873	-	90	75.105	ENSHCOG00000000266	msi2a	68	75.105	Hippocampus_comes
ENSPTIG00000021873	-	91	70.213	ENSHCOG00000017241	-	58	70.213	Hippocampus_comes
ENSPTIG00000021873	-	90	77.637	ENSIPUG00000003732	msi2b	69	77.637	Ictalurus_punctatus
ENSPTIG00000021873	-	91	76.151	ENSIPUG00000021097	msi2a	78	76.151	Ictalurus_punctatus
ENSPTIG00000021873	-	75	86.885	ENSSTOG00000007884	MSI2	65	86.885	Ictidomys_tridecemlineatus
ENSPTIG00000021873	-	72	79.817	ENSJJAG00000009467	-	100	79.817	Jaculus_jaculus
ENSPTIG00000021873	-	90	75.105	ENSKMAG00000009494	msi2a	72	75.105	Kryptolebias_marmoratus
ENSPTIG00000021873	-	93	73.529	ENSLBEG00000007061	msi2a	84	71.875	Labrus_bergylta
ENSPTIG00000021873	-	82	71.000	ENSLBEG00000026223	-	57	71.000	Labrus_bergylta
ENSPTIG00000021873	-	70	61.616	ENSLACG00000016798	MSI2	98	61.616	Latimeria_chalumnae
ENSPTIG00000021873	-	90	77.637	ENSLOCG00000004675	msi2b	93	60.000	Lepisosteus_oculatus
ENSPTIG00000021873	-	99	77.953	ENSMFAG00000003775	MSI2	99	77.953	Macaca_fascicularis
ENSPTIG00000021873	-	99	77.953	ENSMMUG00000002069	MSI2	99	77.953	Macaca_mulatta
ENSPTIG00000021873	-	99	77.953	ENSMNEG00000045275	MSI2	99	77.953	Macaca_nemestrina
ENSPTIG00000021873	-	99	77.953	ENSMLEG00000033888	MSI2	99	77.953	Mandrillus_leucophaeus
ENSPTIG00000021873	-	91	75.314	ENSMAMG00000010503	msi2a	78	75.314	Mastacembelus_armatus
ENSPTIG00000021873	-	90	76.371	ENSMAMG00000002488	-	94	72.222	Mastacembelus_armatus
ENSPTIG00000021873	-	91	74.895	ENSMZEG00005007676	msi2a	78	74.895	Maylandia_zebra
ENSPTIG00000021873	-	92	78.512	ENSMAUG00000003862	Msi2	70	78.512	Mesocricetus_auratus
ENSPTIG00000021873	-	99	77.953	ENSMICG00000013598	-	99	77.953	Microcebus_murinus
ENSPTIG00000021873	-	91	63.362	ENSMICG00000032913	-	68	63.362	Microcebus_murinus
ENSPTIG00000021873	-	92	78.512	ENSMOCG00000005820	Msi2	70	78.512	Microtus_ochrogaster
ENSPTIG00000021873	-	95	71.429	ENSMMOG00000008348	msi2a	85	69.784	Mola_mola
ENSPTIG00000021873	-	91	75.314	ENSMALG00000000071	msi2a	78	75.314	Monopterus_albus
ENSPTIG00000021873	-	92	78.512	MGP_CAROLIEiJ_G0016948	Msi2	100	79.817	Mus_caroli
ENSPTIG00000021873	-	92	78.512	ENSMUSG00000069769	Msi2	100	79.817	Mus_musculus
ENSPTIG00000021873	-	92	78.512	MGP_PahariEiJ_G0018079	Msi2	100	79.817	Mus_pahari
ENSPTIG00000021873	-	92	78.512	MGP_SPRETEiJ_G0017795	Msi2	100	79.817	Mus_spretus
ENSPTIG00000021873	-	93	77.731	ENSMPUG00000015377	MSI2	73	77.731	Mustela_putorius_furo
ENSPTIG00000021873	-	93	77.311	ENSMLUG00000007865	MSI2	73	77.311	Myotis_lucifugus
ENSPTIG00000021873	-	92	78.512	ENSNGAG00000017807	Msi2	70	78.512	Nannospalax_galili
ENSPTIG00000021873	-	90	75.105	ENSNBRG00000014596	msi2a	87	71.724	Neolamprologus_brichardi
ENSPTIG00000021873	-	87	82.667	ENSNLEG00000008059	MSI2	100	82.667	Nomascus_leucogenys
ENSPTIG00000021873	-	62	80.263	ENSOPRG00000000872	-	64	80.263	Ochotona_princeps
ENSPTIG00000021873	-	92	78.512	ENSODEG00000011974	MSI2	70	78.512	Octodon_degus
ENSPTIG00000021873	-	77	71.528	ENSONIG00000001972	msi2a	80	71.528	Oreochromis_niloticus
ENSPTIG00000021873	-	84	82.569	ENSOANG00000005667	MSI2	55	82.569	Ornithorhynchus_anatinus
ENSPTIG00000021873	-	93	77.731	ENSOCUG00000010440	MSI2	73	77.731	Oryctolagus_cuniculus
ENSPTIG00000021873	-	91	75.314	ENSORLG00000009671	msi2a	78	75.314	Oryzias_latipes
ENSPTIG00000021873	-	93	73.529	ENSORLG00020021556	msi2a	78	75.314	Oryzias_latipes_hni
ENSPTIG00000021873	-	91	75.314	ENSORLG00015004592	msi2a	78	75.314	Oryzias_latipes_hsok
ENSPTIG00000021873	-	91	75.314	ENSOMEG00000000146	msi2a	78	75.314	Oryzias_melastigma
ENSPTIG00000021873	-	84	77.523	ENSOGAG00000005621	MSI2	72	77.523	Otolemur_garnettii
ENSPTIG00000021873	-	99	77.559	ENSPPAG00000037697	MSI2	99	77.559	Pan_paniscus
ENSPTIG00000021873	-	99	77.953	ENSPPRG00000001848	MSI2	99	77.953	Panthera_pardus
ENSPTIG00000021873	-	99	77.559	ENSPTRG00000009437	MSI2	99	77.559	Pan_troglodytes
ENSPTIG00000021873	-	99	77.953	ENSPANG00000022319	MSI2	99	77.953	Papio_anubis
ENSPTIG00000021873	-	90	73.950	ENSPKIG00000007038	-	74	73.950	Paramormyrops_kingsleyae
ENSPTIG00000021873	-	56	60.714	ENSPKIG00000017107	-	74	60.714	Paramormyrops_kingsleyae
ENSPTIG00000021873	-	90	79.325	ENSPSIG00000008618	MSI2	59	79.325	Pelodiscus_sinensis
ENSPTIG00000021873	-	90	74.026	ENSPMGG00000005888	msi2a	71	74.026	Periophthalmus_magnuspinnatus
ENSPTIG00000021873	-	72	79.817	ENSPEMG00000021793	-	100	79.817	Peromyscus_maniculatus_bairdii
ENSPTIG00000021873	-	91	79.498	ENSPCIG00000006063	MSI2	68	79.498	Phascolarctos_cinereus
ENSPTIG00000021873	-	65	63.265	ENSPFOG00000019337	MSI2	84	63.265	Poecilia_formosa
ENSPTIG00000021873	-	77	60.625	ENSPLAG00000000436	msi2a	84	60.625	Poecilia_latipinna
ENSPTIG00000021873	-	77	60.135	ENSPMEG00000013247	msi2a	85	60.135	Poecilia_mexicana
ENSPTIG00000021873	-	90	75.527	ENSPREG00000000881	msi2a	70	74.459	Poecilia_reticulata
ENSPTIG00000021873	-	63	84.416	ENSPPYG00000008244	-	64	84.416	Pongo_abelii
ENSPTIG00000021873	-	63	46.104	ENSPCAG00000010552	MSI2	65	46.104	Procavia_capensis
ENSPTIG00000021873	-	81	71.724	ENSPCOG00000019195	-	99	71.724	Propithecus_coquereli
ENSPTIG00000021873	-	70	83.516	ENSPVAG00000017053	MSI2	62	83.516	Pteropus_vampyrus
ENSPTIG00000021873	-	91	74.895	ENSPNYG00000018393	msi2a	78	74.895	Pundamilia_nyererei
ENSPTIG00000021873	-	90	76.793	ENSPNAG00000014957	msi2a	72	76.793	Pygocentrus_nattereri
ENSPTIG00000021873	-	90	77.637	ENSPNAG00000000844	msi2b	71	76.623	Pygocentrus_nattereri
ENSPTIG00000021873	-	76	86.486	ENSRNOG00000025338	Msi2	70	83.163	Rattus_norvegicus
ENSPTIG00000021873	-	55	56.627	ENSRBIG00000032064	-	80	56.627	Rhinopithecus_bieti
ENSPTIG00000021873	-	80	71.318	ENSRROG00000034421	-	98	71.318	Rhinopithecus_roxellana
ENSPTIG00000021873	-	99	77.953	ENSSBOG00000026425	MSI2	99	77.953	Saimiri_boliviensis_boliviensis
ENSPTIG00000021873	-	84	82.569	ENSSHAG00000008672	MSI2	69	82.569	Sarcophilus_harrisii
ENSPTIG00000021873	-	85	75.000	ENSSFOG00015021687	-	77	75.000	Scleropages_formosus
ENSPTIG00000021873	-	89	75.556	ENSSFOG00015012168	msi2b	58	75.556	Scleropages_formosus
ENSPTIG00000021873	-	91	75.314	ENSSMAG00000018484	msi2a	78	75.314	Scophthalmus_maximus
ENSPTIG00000021873	-	91	75.314	ENSSDUG00000014507	msi2a	78	75.314	Seriola_dumerili
ENSPTIG00000021873	-	90	73.391	ENSSDUG00000021968	-	95	71.528	Seriola_dumerili
ENSPTIG00000021873	-	52	58.025	ENSSLDG00000021332	-	64	58.025	Seriola_lalandi_dorsalis
ENSPTIG00000021873	-	91	75.314	ENSSLDG00000017172	msi2a	78	75.314	Seriola_lalandi_dorsalis
ENSPTIG00000021873	-	77	70.064	ENSSPUG00000000913	-	93	70.064	Sphenodon_punctatus
ENSPTIG00000021873	-	91	75.314	ENSSPAG00000017793	msi2a	78	75.314	Stegastes_partitus
ENSPTIG00000021873	-	93	78.689	ENSSSCG00000038505	MSI2	79	78.279	Sus_scrofa
ENSPTIG00000021873	-	90	75.527	ENSTRUG00000021248	msi2a	73	72.131	Takifugu_rubripes
ENSPTIG00000021873	-	91	67.511	ENSTBEG00000001241	MSI2	73	67.511	Tupaia_belangeri
ENSPTIG00000021873	-	62	89.474	ENSTTRG00000002189	MSI2	64	89.474	Tursiops_truncatus
ENSPTIG00000021873	-	99	77.953	ENSUAMG00000000700	MSI2	99	77.953	Ursus_americanus
ENSPTIG00000021873	-	81	82.828	ENSUMAG00000000505	MSI2	76	82.828	Ursus_maritimus
ENSPTIG00000021873	-	70	69.231	ENSVPAG00000006837	-	62	69.231	Vicugna_pacos
ENSPTIG00000021873	-	98	82.511	ENSVVUG00000011783	MSI2	99	82.456	Vulpes_vulpes
ENSPTIG00000021873	-	89	75.966	ENSXCOG00000006113	msi2a	69	69.658	Xiphophorus_couchianus
ENSPTIG00000021873	-	91	75.314	ENSXMAG00000000608	msi2a	78	75.314	Xiphophorus_maculatus