EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000021955 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 5310 bases
Position: chrKE721675.1:3302485-3307794
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000026586	ResIII	PF04851.15	8.5e-06	1	1
ENSPTIP00000026586	DEAD	PF00270.29	2.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000031153	-	855	-	ENSPTIP00000026586	284 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000021955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000021955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000021955	-	85	38.115	ENSPTIG00000011207	EIF4A2	64	38.115
ENSPTIG00000021955	-	83	30.802	ENSPTIG00000008190	DDX19A	51	30.802
ENSPTIG00000021955	-	84	33.471	ENSPTIG00000017669	DDX39B	55	33.471
ENSPTIG00000021955	-	85	36.214	ENSPTIG00000009646	EIF4A3	63	36.214
ENSPTIG00000021955	-	85	36.475	ENSPTIG00000012373	-	69	36.475
ENSPTIG00000021955	-	80	30.342	ENSPTIG00000018953	DDX25	59	30.342
ENSPTIG00000021955	-	84	33.058	ENSPTIG00000017287	DDX39A	64	34.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000021955	-	85	97.107	ENSCAFG00020008055	DDX20	73	97.107	Canis_lupus_dingo
ENSPTIG00000021955	-	87	64.516	ENSCSAVG00000003045	-	67	63.248	Ciona_savignyi
ENSPTIG00000021955	-	85	69.008	ENSEBUG00000004479	ddx20	77	69.008	Eptatretus_burgeri
ENSPTIG00000021955	-	90	92.218	ENSODEG00000007653	-	76	92.218	Octodon_degus
ENSPTIG00000021955	-	75	68.372	ENSPMAG00000009633	-	99	68.372	Petromyzon_marinus