EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000022064 (Gene tree)
Gene ID: 102952049
Gene Symbol: TNRC6B
Alias: -
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 153649 bases
Position: chrKE721724.1:3633092-3786740
Accession: 102952049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000026750	Ago_hook	PF10427.9	4e-21	1	1
ENSPTIP00000026751	Ago_hook	PF10427.9	7.8e-20	1	1
ENSPTIP00000026752	Ago_hook	PF10427.9	7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000031322	TNRC6B-202	5463	-	ENSPTIP00000026751	1820 (aa)	-	-
ENSPTIT00000031323	TNRC6B-203	5133	-	ENSPTIP00000026752	1710 (aa)	-	-
ENSPTIT00000031321	TNRC6B-201	3036	XM_015536338	ENSPTIP00000026750	1011 (aa)	XP_015391824	-

Gene Model

Click here to download ENSPTIG00000022064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000022064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000022064	TNRC6B	95	36.724	ENSPTIG00000006346	TNRC6A	98	34.655
ENSPTIG00000022064	TNRC6B	69	36.808	ENSPTIG00000008791	TNRC6C	61	40.652

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000022064	TNRC6B	98	94.150	ENSG00000100354	TNRC6B	99	92.611	Homo_sapiens
ENSPTIG00000022064	TNRC6B	98	95.822	ENSAMEG00000011025	TNRC6B	99	94.253	Ailuropoda_melanoleuca
ENSPTIG00000022064	TNRC6B	98	85.833	ENSAPLG00000009347	TNRC6B	99	85.596	Anas_platyrhynchos
ENSPTIG00000022064	TNRC6B	94	80.856	ENSACAG00000007281	TNRC6B	98	67.907	Anolis_carolinensis
ENSPTIG00000022064	TNRC6B	98	94.150	ENSANAG00000035042	TNRC6B	99	92.611	Aotus_nancymaae
ENSPTIG00000022064	TNRC6B	75	79.032	ENSAMXG00000008707	tnrc6b	84	42.794	Astyanax_mexicanus
ENSPTIG00000022064	TNRC6B	98	93.663	ENSBTAG00000021076	TNRC6B	99	92.135	Bos_taurus
ENSPTIG00000022064	TNRC6B	98	93.764	ENSCJAG00000002732	TNRC6B	99	93.536	Callithrix_jacchus
ENSPTIG00000022064	TNRC6B	98	95.558	ENSCAFG00000001255	TNRC6B	99	93.999	Canis_familiaris
ENSPTIG00000022064	TNRC6B	98	93.322	ENSCAFG00020002189	TNRC6B	99	92.849	Canis_lupus_dingo
ENSPTIG00000022064	TNRC6B	98	92.771	ENSCHIG00000003491	TNRC6B	99	87.562	Capra_hircus
ENSPTIG00000022064	TNRC6B	98	94.088	ENSTSYG00000011836	TNRC6B	99	92.548	Carlito_syrichta
ENSPTIG00000022064	TNRC6B	98	92.080	ENSCPOG00000005705	TNRC6B	97	89.879	Cavia_porcellus
ENSPTIG00000022064	TNRC6B	98	92.977	ENSCCAG00000019912	TNRC6B	99	91.550	Cebus_capucinus
ENSPTIG00000022064	TNRC6B	98	93.478	ENSCATG00000029291	TNRC6B	99	91.972	Cercocebus_atys
ENSPTIG00000022064	TNRC6B	98	89.673	ENSCLAG00000016942	TNRC6B	97	87.944	Chinchilla_lanigera
ENSPTIG00000022064	TNRC6B	98	86.874	ENSCSAG00000006021	TNRC6B	99	83.779	Chlorocebus_sabaeus
ENSPTIG00000022064	TNRC6B	59	93.750	ENSCHOG00000010004	-	61	97.436	Choloepus_hoffmanni
ENSPTIG00000022064	TNRC6B	91	85.957	ENSCPBG00000022932	TNRC6B	99	84.514	Chrysemys_picta_bellii
ENSPTIG00000022064	TNRC6B	98	93.813	ENSCANG00000030776	TNRC6B	99	92.299	Colobus_angolensis_palliatus
ENSPTIG00000022064	TNRC6B	94	88.365	ENSCGRG00001020166	Tnrc6b	97	86.651	Cricetulus_griseus_chok1gshd
ENSPTIG00000022064	TNRC6B	99	88.706	ENSCGRG00000016696	Tnrc6b	99	87.042	Cricetulus_griseus_crigri
ENSPTIG00000022064	TNRC6B	98	92.766	ENSDNOG00000012744	TNRC6B	99	91.307	Dasypus_novemcinctus
ENSPTIG00000022064	TNRC6B	96	93.363	ENSDORG00000003386	Tnrc6b	97	93.192	Dipodomys_ordii
ENSPTIG00000022064	TNRC6B	98	84.757	ENSETEG00000006570	TNRC6B	94	95.506	Echinops_telfairi
ENSPTIG00000022064	TNRC6B	99	93.511	ENSEASG00005005306	TNRC6B	100	93.337	Equus_asinus_asinus
ENSPTIG00000022064	TNRC6B	98	95.495	ENSECAG00000009759	TNRC6B	97	93.934	Equus_caballus
ENSPTIG00000022064	TNRC6B	71	94.690	ENSEEUG00000008690	-	61	95.652	Erinaceus_europaeus
ENSPTIG00000022064	TNRC6B	51	63.799	ENSELUG00000019468	-	68	63.799	Esox_lucius
ENSPTIG00000022064	TNRC6B	99	94.984	ENSFCAG00000004791	TNRC6B	99	94.984	Felis_catus
ENSPTIG00000022064	TNRC6B	95	83.166	ENSFALG00000012195	TNRC6B	100	82.516	Ficedula_albicollis
ENSPTIG00000022064	TNRC6B	98	89.667	ENSFDAG00000021368	TNRC6B	97	87.993	Fukomys_damarensis
ENSPTIG00000022064	TNRC6B	98	83.966	ENSGALG00000012050	TNRC6B	98	81.155	Gallus_gallus
ENSPTIG00000022064	TNRC6B	98	86.230	ENSGAGG00000025188	TNRC6B	99	83.866	Gopherus_agassizii
ENSPTIG00000022064	TNRC6B	98	94.095	ENSGGOG00000008444	TNRC6B	99	92.556	Gorilla_gorilla
ENSPTIG00000022064	TNRC6B	98	92.790	ENSHGLG00000009306	TNRC6B	100	92.568	Heterocephalus_glaber_female
ENSPTIG00000022064	TNRC6B	98	90.046	ENSHGLG00100018108	TNRC6B	98	88.249	Heterocephalus_glaber_male
ENSPTIG00000022064	TNRC6B	77	62.963	ENSIPUG00000001515	tnrc6b	85	45.844	Ictalurus_punctatus
ENSPTIG00000022064	TNRC6B	98	90.679	ENSSTOG00000008927	TNRC6B	97	88.870	Ictidomys_tridecemlineatus
ENSPTIG00000022064	TNRC6B	98	89.282	ENSJJAG00000015779	Tnrc6b	97	87.310	Jaculus_jaculus
ENSPTIG00000022064	TNRC6B	96	67.647	ENSLACG00000000628	-	99	58.727	Latimeria_chalumnae
ENSPTIG00000022064	TNRC6B	82	90.166	ENSLAFG00000014473	TNRC6B	99	92.517	Loxodonta_africana
ENSPTIG00000022064	TNRC6B	98	93.590	ENSMFAG00000003862	TNRC6B	99	92.081	Macaca_fascicularis
ENSPTIG00000022064	TNRC6B	98	93.824	ENSMMUG00000021345	TNRC6B	99	92.214	Macaca_mulatta
ENSPTIG00000022064	TNRC6B	98	93.884	ENSMNEG00000042745	TNRC6B	99	92.370	Macaca_nemestrina
ENSPTIG00000022064	TNRC6B	98	94.091	ENSMLEG00000041780	TNRC6B	99	92.572	Mandrillus_leucophaeus
ENSPTIG00000022064	TNRC6B	98	87.208	ENSMGAG00000012333	TNRC6B	99	85.246	Meleagris_gallopavo
ENSPTIG00000022064	TNRC6B	98	88.468	ENSMAUG00000016123	Tnrc6b	99	86.082	Mesocricetus_auratus
ENSPTIG00000022064	TNRC6B	98	93.326	ENSMICG00000014056	TNRC6B	97	95.837	Microcebus_murinus
ENSPTIG00000022064	TNRC6B	98	85.027	ENSMOCG00000020334	Tnrc6b	97	86.367	Microtus_ochrogaster
ENSPTIG00000022064	TNRC6B	98	88.526	MGP_CAROLIEiJ_G0020043	Tnrc6b	97	86.648	Mus_caroli
ENSPTIG00000022064	TNRC6B	98	88.471	ENSMUSG00000047888	Tnrc6b	99	88.266	Mus_musculus
ENSPTIG00000022064	TNRC6B	98	88.404	MGP_PahariEiJ_G0020045	Tnrc6b	97	86.528	Mus_pahari
ENSPTIG00000022064	TNRC6B	98	91.667	MGP_SPRETEiJ_G0020941	Tnrc6b	97	90.284	Mus_spretus
ENSPTIG00000022064	TNRC6B	99	87.126	ENSMPUG00000016442	TNRC6B	99	88.057	Mustela_putorius_furo
ENSPTIG00000022064	TNRC6B	98	94.091	ENSMLUG00000008765	TNRC6B	99	92.771	Myotis_lucifugus
ENSPTIG00000022064	TNRC6B	98	88.746	ENSNGAG00000021294	Tnrc6b	97	86.832	Nannospalax_galili
ENSPTIG00000022064	TNRC6B	98	91.980	ENSNLEG00000015311	TNRC6B	99	90.847	Nomascus_leucogenys
ENSPTIG00000022064	TNRC6B	94	90.000	ENSOPRG00000012054	TNRC6B	86	93.532	Ochotona_princeps
ENSPTIG00000022064	TNRC6B	98	89.736	ENSODEG00000013146	TNRC6B	97	88.063	Octodon_degus
ENSPTIG00000022064	TNRC6B	94	56.303	ENSONIG00000019679	-	99	38.061	Oreochromis_niloticus
ENSPTIG00000022064	TNRC6B	99	91.103	ENSOCUG00000016128	TNRC6B	97	88.285	Oryctolagus_cuniculus
ENSPTIG00000022064	TNRC6B	98	93.778	ENSOGAG00000011096	TNRC6B	99	92.299	Otolemur_garnettii
ENSPTIG00000022064	TNRC6B	98	90.409	ENSOARG00000017238	TNRC6B	97	88.496	Ovis_aries
ENSPTIG00000022064	TNRC6B	98	94.150	ENSPPAG00000028514	TNRC6B	99	92.611	Pan_paniscus
ENSPTIG00000022064	TNRC6B	99	95.348	ENSPPRG00000017741	TNRC6B	99	95.348	Panthera_pardus
ENSPTIG00000022064	TNRC6B	98	94.314	ENSPTRG00000047826	TNRC6B	99	92.771	Pan_troglodytes
ENSPTIG00000022064	TNRC6B	98	90.382	ENSPANG00000009271	TNRC6B	98	93.860	Papio_anubis
ENSPTIG00000022064	TNRC6B	98	83.190	ENSPSIG00000005318	TNRC6B	99	81.038	Pelodiscus_sinensis
ENSPTIG00000022064	TNRC6B	98	88.144	ENSPEMG00000011403	Tnrc6b	97	86.502	Peromyscus_maniculatus_bairdii
ENSPTIG00000022064	TNRC6B	98	84.859	ENSPCIG00000020347	TNRC6B	99	83.725	Phascolarctos_cinereus
ENSPTIG00000022064	TNRC6B	88	65.517	ENSPFOG00000006033	-	96	41.160	Poecilia_formosa
ENSPTIG00000022064	TNRC6B	78	61.111	ENSPLAG00000001418	-	79	46.781	Poecilia_latipinna
ENSPTIG00000022064	TNRC6B	72	78.788	ENSPMEG00000006371	-	59	51.544	Poecilia_mexicana
ENSPTIG00000022064	TNRC6B	98	93.713	ENSPPYG00000011849	TNRC6B	99	92.299	Pongo_abelii
ENSPTIG00000022064	TNRC6B	95	83.784	ENSPCAG00000008739	TNRC6B	75	88.911	Procavia_capensis
ENSPTIG00000022064	TNRC6B	98	93.548	ENSPCOG00000020790	TNRC6B	99	93.357	Propithecus_coquereli
ENSPTIG00000022064	TNRC6B	91	96.519	ENSPVAG00000004975	TNRC6B	91	93.798	Pteropus_vampyrus
ENSPTIG00000022064	TNRC6B	83	51.163	ENSPNAG00000011713	tnrc6b	73	45.439	Pygocentrus_nattereri
ENSPTIG00000022064	TNRC6B	98	88.064	ENSRNOG00000024907	Tnrc6b	97	86.427	Rattus_norvegicus
ENSPTIG00000022064	TNRC6B	98	93.868	ENSRBIG00000035576	TNRC6B	100	91.454	Rhinopithecus_bieti
ENSPTIG00000022064	TNRC6B	98	93.813	ENSRROG00000031135	TNRC6B	99	92.299	Rhinopithecus_roxellana
ENSPTIG00000022064	TNRC6B	98	94.128	ENSSBOG00000029743	TNRC6B	99	92.485	Saimiri_boliviensis_boliviensis
ENSPTIG00000022064	TNRC6B	98	84.969	ENSSHAG00000009692	TNRC6B	99	83.488	Sarcophilus_harrisii
ENSPTIG00000022064	TNRC6B	75	86.316	ENSSARG00000007971	-	70	95.455	Sorex_araneus
ENSPTIG00000022064	TNRC6B	92	85.706	ENSSPUG00000010801	TNRC6B	100	85.170	Sphenodon_punctatus
ENSPTIG00000022064	TNRC6B	98	94.540	ENSSSCG00000000078	TNRC6B	97	92.994	Sus_scrofa
ENSPTIG00000022064	TNRC6B	91	87.029	ENSTGUG00000010138	-	99	85.490	Taeniopygia_guttata
ENSPTIG00000022064	TNRC6B	97	92.899	ENSTTRG00000011465	TNRC6B	97	90.315	Tursiops_truncatus
ENSPTIG00000022064	TNRC6B	99	94.632	ENSUAMG00000007174	TNRC6B	99	94.399	Ursus_americanus
ENSPTIG00000022064	TNRC6B	98	92.582	ENSUMAG00000014336	TNRC6B	100	91.839	Ursus_maritimus
ENSPTIG00000022064	TNRC6B	80	90.476	ENSVPAG00000001467	TNRC6B	70	91.084	Vicugna_pacos
ENSPTIG00000022064	TNRC6B	98	95.609	ENSVVUG00000007064	TNRC6B	98	94.047	Vulpes_vulpes
ENSPTIG00000022064	TNRC6B	69	47.952	ENSXCOG00000003042	-	96	35.538	Xiphophorus_couchianus