EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000000445 (Gene tree)
Gene ID: 740597
Gene Symbol: SRSF4
Alias: -
Full Name: serine and arginine rich splicing factor 4
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 34327 bases
Position: chr1:28338637-28372963
Accession: 9518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000000775	RRM_1	PF00076.22	4.8e-31	1	2
ENSPTRP00000000775	RRM_1	PF00076.22	4.8e-31	2	2
ENSPTRP00000091443	RRM_1	PF00076.22	7.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000082204	-	483	-	ENSPTRP00000091443	160 (aa)	-	A0A2I3TQC3
ENSPTRT00000000865	-	2776	XM_001155042	ENSPTRP00000000775	494 (aa)	XP_001155042	H2PYI1

Gene Model

Click here to download ENSPTRG00000000445's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03040	Spliceosome	KEGG
ptr05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000000445's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000000445	SRSF4	100	100.000	ENSG00000116350	SRSF4	100	100.000	Homo_sapiens
ENSPTRG00000000445	SRSF4	92	80.736	ENSAMEG00000000594	SRSF4	64	95.679	Ailuropoda_melanoleuca
ENSPTRG00000000445	SRSF4	85	71.122	ENSAPLG00000006595	-	57	83.071	Anas_platyrhynchos
ENSPTRG00000000445	SRSF4	100	98.750	ENSANAG00000037134	SRSF4	100	98.750	Aotus_nancymaae
ENSPTRG00000000445	SRSF4	60	59.060	ENSAMXG00000034811	srsf4	81	80.723	Astyanax_mexicanus
ENSPTRG00000000445	SRSF4	92	90.239	ENSBTAG00000013309	SRSF4	92	88.720	Bos_taurus
ENSPTRG00000000445	SRSF4	100	98.750	ENSCJAG00000047192	SRSF4	100	98.750	Callithrix_jacchus
ENSPTRG00000000445	SRSF4	85	88.605	ENSCAFG00000011669	SRSF4	90	87.674	Canis_familiaris
ENSPTRG00000000445	SRSF4	85	89.720	ENSCAFG00020023963	SRSF4	88	88.915	Canis_lupus_dingo
ENSPTRG00000000445	SRSF4	95	86.275	ENSCHIG00000022096	SRSF4	99	86.275	Capra_hircus
ENSPTRG00000000445	SRSF4	100	96.976	ENSTSYG00000007903	SRSF4	100	96.976	Carlito_syrichta
ENSPTRG00000000445	SRSF4	92	79.431	ENSCAPG00000014747	SRSF4	91	79.341	Cavia_aperea
ENSPTRG00000000445	SRSF4	93	83.405	ENSCPOG00000036234	SRSF4	92	85.065	Cavia_porcellus
ENSPTRG00000000445	SRSF4	100	98.750	ENSCCAG00000033585	SRSF4	100	98.750	Cebus_capucinus
ENSPTRG00000000445	SRSF4	100	100.000	ENSCATG00000031440	SRSF4	100	100.000	Cercocebus_atys
ENSPTRG00000000445	SRSF4	93	87.229	ENSCLAG00000009008	SRSF4	92	86.522	Chinchilla_lanigera
ENSPTRG00000000445	SRSF4	100	99.393	ENSCSAG00000001022	SRSF4	100	99.393	Chlorocebus_sabaeus
ENSPTRG00000000445	SRSF4	85	85.308	ENSCHOG00000013858	SRSF4	92	85.782	Choloepus_hoffmanni
ENSPTRG00000000445	SRSF4	68	83.680	ENSCPBG00000009020	SRSF4	65	90.491	Chrysemys_picta_bellii
ENSPTRG00000000445	SRSF4	100	100.000	ENSCANG00000028667	SRSF4	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000000445	SRSF4	58	96.503	ENSCGRG00001021115	Srsf4	92	82.969	Cricetulus_griseus_chok1gshd
ENSPTRG00000000445	SRSF4	50	96.000	ENSCGRG00000014137	Srsf4	91	79.858	Cricetulus_griseus_crigri
ENSPTRG00000000445	SRSF4	92	84.894	ENSDNOG00000047961	SRSF4	64	96.615	Dasypus_novemcinctus
ENSPTRG00000000445	SRSF4	92	80.610	ENSDORG00000002459	Srsf4	92	78.431	Dipodomys_ordii
ENSPTRG00000000445	SRSF4	92	94.156	ENSEASG00005010168	SRSF4	92	94.156	Equus_asinus_asinus
ENSPTRG00000000445	SRSF4	92	94.156	ENSECAG00000021350	SRSF4	92	94.156	Equus_caballus
ENSPTRG00000000445	SRSF4	92	90.989	ENSEEUG00000008479	SRSF4	92	89.890	Erinaceus_europaeus
ENSPTRG00000000445	SRSF4	53	55.921	ENSELUG00000017551	srsf4	93	72.308	Esox_lucius
ENSPTRG00000000445	SRSF4	92	92.747	ENSFCAG00000027821	SRSF4	92	91.648	Felis_catus
ENSPTRG00000000445	SRSF4	88	69.885	ENSFALG00000001346	SRSF4	60	84.775	Ficedula_albicollis
ENSPTRG00000000445	SRSF4	88	84.055	ENSFDAG00000007332	SRSF4	92	83.059	Fukomys_damarensis
ENSPTRG00000000445	SRSF4	92	73.026	ENSGALG00000050314	SRSF4	61	84.828	Gallus_gallus
ENSPTRG00000000445	SRSF4	68	82.544	ENSGAGG00000014836	SRSF4	65	90.184	Gopherus_agassizii
ENSPTRG00000000445	SRSF4	100	100.000	ENSGGOG00000002444	SRSF4	100	100.000	Gorilla_gorilla
ENSPTRG00000000445	SRSF4	95	87.447	ENSHGLG00000011842	SRSF4	92	85.903	Heterocephalus_glaber_female
ENSPTRG00000000445	SRSF4	95	87.447	ENSHGLG00100017279	SRSF4	92	85.903	Heterocephalus_glaber_male
ENSPTRG00000000445	SRSF4	92	90.870	ENSSTOG00000015908	SRSF4	92	90.870	Ictidomys_tridecemlineatus
ENSPTRG00000000445	SRSF4	61	76.238	ENSJJAG00000022153	Srsf4	92	74.292	Jaculus_jaculus
ENSPTRG00000000445	SRSF4	84	90.141	ENSLAFG00000002575	SRSF4	86	89.220	Loxodonta_africana
ENSPTRG00000000445	SRSF4	100	100.000	ENSMFAG00000041784	SRSF4	100	100.000	Macaca_fascicularis
ENSPTRG00000000445	SRSF4	100	100.000	ENSMMUG00000007110	SRSF4	100	100.000	Macaca_mulatta
ENSPTRG00000000445	SRSF4	100	100.000	ENSMNEG00000034931	SRSF4	100	100.000	Macaca_nemestrina
ENSPTRG00000000445	SRSF4	100	100.000	ENSMLEG00000031619	SRSF4	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000000445	SRSF4	92	73.026	ENSMGAG00000002400	SRSF4	61	85.172	Meleagris_gallopavo
ENSPTRG00000000445	SRSF4	93	86.609	ENSMAUG00000021940	Srsf4	92	84.430	Mesocricetus_auratus
ENSPTRG00000000445	SRSF4	100	95.409	ENSMICG00000043567	SRSF4	100	90.854	Microcebus_murinus
ENSPTRG00000000445	SRSF4	93	82.969	ENSMOCG00000013319	Srsf4	92	83.624	Microtus_ochrogaster
ENSPTRG00000000445	SRSF4	56	64.214	ENSMMOG00000013653	srsf4	65	80.226	Mola_mola
ENSPTRG00000000445	SRSF4	62	91.586	ENSMODG00000011052	SRSF4	90	94.828	Monodelphis_domestica
ENSPTRG00000000445	SRSF4	51	71.032	ENSMALG00000013392	srsf4	66	86.441	Monopterus_albus
ENSPTRG00000000445	SRSF4	93	82.468	MGP_CAROLIEiJ_G0026555	Srsf4	92	83.807	Mus_caroli
ENSPTRG00000000445	SRSF4	93	83.983	ENSMUSG00000028911	Srsf4	92	84.211	Mus_musculus
ENSPTRG00000000445	SRSF4	93	85.590	MGP_PahariEiJ_G0028887	Srsf4	92	85.746	Mus_pahari
ENSPTRG00000000445	SRSF4	93	82.684	MGP_SPRETEiJ_G0027535	Srsf4	92	83.333	Mus_spretus
ENSPTRG00000000445	SRSF4	92	87.500	ENSMPUG00000015470	SRSF4	92	88.147	Mustela_putorius_furo
ENSPTRG00000000445	SRSF4	58	96.864	ENSMLUG00000014770	SRSF4	92	86.957	Myotis_lucifugus
ENSPTRG00000000445	SRSF4	92	86.404	ENSNGAG00000012225	Srsf4	92	85.746	Nannospalax_galili
ENSPTRG00000000445	SRSF4	100	99.190	ENSNLEG00000009916	SRSF4	100	99.190	Nomascus_leucogenys
ENSPTRG00000000445	SRSF4	92	87.939	ENSOPRG00000010098	SRSF4	93	87.061	Ochotona_princeps
ENSPTRG00000000445	SRSF4	67	88.589	ENSODEG00000003230	SRSF4	92	84.483	Octodon_degus
ENSPTRG00000000445	SRSF4	92	87.826	ENSOCUG00000001837	SRSF4	93	85.870	Oryctolagus_cuniculus
ENSPTRG00000000445	SRSF4	92	94.079	ENSOGAG00000015515	SRSF4	92	92.982	Otolemur_garnettii
ENSPTRG00000000445	SRSF4	100	100.000	ENSPPAG00000028357	SRSF4	100	100.000	Pan_paniscus
ENSPTRG00000000445	SRSF4	92	92.747	ENSPPRG00000016248	SRSF4	92	91.648	Panthera_pardus
ENSPTRG00000000445	SRSF4	100	100.000	ENSPANG00000021937	SRSF4	100	100.000	Papio_anubis
ENSPTRG00000000445	SRSF4	88	80.505	ENSPEMG00000003365	Srsf4	91	81.473	Peromyscus_maniculatus_bairdii
ENSPTRG00000000445	SRSF4	100	98.988	ENSPPYG00000001629	SRSF4	100	98.988	Pongo_abelii
ENSPTRG00000000445	SRSF4	92	88.352	ENSPCAG00000009879	SRSF4	92	89.451	Procavia_capensis
ENSPTRG00000000445	SRSF4	100	90.854	ENSPCOG00000027341	SRSF4	100	90.854	Propithecus_coquereli
ENSPTRG00000000445	SRSF4	67	79.630	ENSPVAG00000012500	SRSF4	67	79.630	Pteropus_vampyrus
ENSPTRG00000000445	SRSF4	56	65.591	ENSPNYG00000003796	srsf4	56	85.635	Pundamilia_nyererei
ENSPTRG00000000445	SRSF4	53	71.591	ENSPNAG00000023844	srsf4	53	83.616	Pygocentrus_nattereri
ENSPTRG00000000445	SRSF4	66	93.846	ENSRNOG00000010007	Srsf4	92	85.339	Rattus_norvegicus
ENSPTRG00000000445	SRSF4	100	99.393	ENSRBIG00000035789	SRSF4	100	99.393	Rhinopithecus_bieti
ENSPTRG00000000445	SRSF4	100	99.393	ENSRROG00000029463	SRSF4	100	99.393	Rhinopithecus_roxellana
ENSPTRG00000000445	SRSF4	100	97.000	ENSSBOG00000027098	SRSF4	100	97.000	Saimiri_boliviensis_boliviensis
ENSPTRG00000000445	SRSF4	57	90.071	ENSSHAG00000012407	SRSF4	100	88.356	Sarcophilus_harrisii
ENSPTRG00000000445	SRSF4	60	63.636	ENSSDUG00000007387	srsf4	54	87.571	Seriola_dumerili
ENSPTRG00000000445	SRSF4	50	74.494	ENSSARG00000001277	SRSF4	52	81.435	Sorex_araneus
ENSPTRG00000000445	SRSF4	63	85.489	ENSSPUG00000015318	-	67	83.792	Sphenodon_punctatus
ENSPTRG00000000445	SRSF4	96	90.756	ENSSSCG00000003589	SRSF4	94	91.028	Sus_scrofa
ENSPTRG00000000445	SRSF4	85	72.577	ENSTGUG00000000765	SRSF4	57	82.609	Taeniopygia_guttata
ENSPTRG00000000445	SRSF4	52	68.364	ENSTRUG00000011891	srsf4	62	80.729	Takifugu_rubripes
ENSPTRG00000000445	SRSF4	92	91.868	ENSTTRG00000002572	SRSF4	92	91.868	Tursiops_truncatus
ENSPTRG00000000445	SRSF4	92	89.633	ENSUAMG00000006106	SRSF4	92	89.107	Ursus_americanus
ENSPTRG00000000445	SRSF4	85	89.486	ENSVVUG00000012690	SRSF4	90	88.084	Vulpes_vulpes