EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000000557 (Gene tree)
Gene ID: 456764
Gene Symbol: YRDC
Alias: -
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 5733 bases
Position: chr1:37172228-37177960
Accession: 10073
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000000978	Sua5_yciO_yrdC	PF01300.18	1e-43	1	1
ENSPTRP00000081010	Sua5_yciO_yrdC	PF01300.18	2.1e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000001086	-	1943	XM_513328	ENSPTRP00000000978	279 (aa)	XP_513328	H2PYP8
ENSPTRT00000105887	-	1092	-	ENSPTRP00000081010	363 (aa)	-	A0A2I3SVL7

Gene Model

Click here to download ENSPTRG00000000557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000000557's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000000557	YRDC	100	99.642	ENSG00000196449	YRDC	100	99.642	Homo_sapiens
ENSPTRG00000000557	YRDC	81	59.292	ENSAPOG00000024293	yrdc	85	59.292	Acanthochromis_polyacanthus
ENSPTRG00000000557	YRDC	67	93.048	ENSAMEG00000001173	YRDC	99	93.048	Ailuropoda_melanoleuca
ENSPTRG00000000557	YRDC	73	64.706	ENSACIG00000017330	yrdc	75	64.706	Amphilophus_citrinellus
ENSPTRG00000000557	YRDC	81	59.735	ENSAOCG00000021647	yrdc	85	59.735	Amphiprion_ocellaris
ENSPTRG00000000557	YRDC	73	63.235	ENSAPEG00000006164	yrdc	77	63.235	Amphiprion_percula
ENSPTRG00000000557	YRDC	73	65.196	ENSATEG00000010086	yrdc	75	65.196	Anabas_testudineus
ENSPTRG00000000557	YRDC	70	67.526	ENSACAG00000017203	YRDC	99	64.762	Anolis_carolinensis
ENSPTRG00000000557	YRDC	98	88.406	ENSANAG00000031052	-	98	88.406	Aotus_nancymaae
ENSPTRG00000000557	YRDC	84	91.845	ENSANAG00000028788	-	98	91.845	Aotus_nancymaae
ENSPTRG00000000557	YRDC	92	55.598	ENSACLG00000027775	yrdc	94	55.598	Astatotilapia_calliptera
ENSPTRG00000000557	YRDC	83	58.621	ENSAMXG00000037791	yrdc	86	58.621	Astyanax_mexicanus
ENSPTRG00000000557	YRDC	99	88.849	ENSBTAG00000006510	YRDC	99	88.489	Bos_taurus
ENSPTRG00000000557	YRDC	82	37.500	WBGene00012997	Y48C3A.18	97	37.903	Caenorhabditis_elegans
ENSPTRG00000000557	YRDC	100	97.849	ENSCJAG00000002078	YRDC	100	97.521	Callithrix_jacchus
ENSPTRG00000000557	YRDC	99	84.532	ENSCAFG00000003253	YRDC	99	84.532	Canis_familiaris
ENSPTRG00000000557	YRDC	99	86.331	ENSCAFG00020007843	YRDC	99	86.331	Canis_lupus_dingo
ENSPTRG00000000557	YRDC	100	87.500	ENSCHIG00000007882	YRDC	100	87.143	Capra_hircus
ENSPTRG00000000557	YRDC	63	93.785	ENSTSYG00000005555	YRDC	62	93.678	Carlito_syrichta
ENSPTRG00000000557	YRDC	99	87.410	ENSCPOG00000036144	YRDC	99	87.410	Cavia_porcellus
ENSPTRG00000000557	YRDC	100	97.491	ENSCCAG00000028891	YRDC	100	97.491	Cebus_capucinus
ENSPTRG00000000557	YRDC	100	98.566	ENSCATG00000036928	YRDC	100	98.566	Cercocebus_atys
ENSPTRG00000000557	YRDC	99	88.489	ENSCLAG00000015012	YRDC	99	88.489	Chinchilla_lanigera
ENSPTRG00000000557	YRDC	100	98.208	ENSCSAG00000001116	YRDC	100	98.208	Chlorocebus_sabaeus
ENSPTRG00000000557	YRDC	75	86.124	ENSCHOG00000005500	YRDC	100	86.124	Choloepus_hoffmanni
ENSPTRG00000000557	YRDC	75	68.750	ENSCPBG00000018446	YRDC	89	68.750	Chrysemys_picta_bellii
ENSPTRG00000000557	YRDC	73	48.357	ENSCING00000007564	-	98	48.357	Ciona_intestinalis
ENSPTRG00000000557	YRDC	73	47.867	ENSCSAVG00000009982	-	98	47.867	Ciona_savignyi
ENSPTRG00000000557	YRDC	100	98.208	ENSCANG00000031111	YRDC	100	98.208	Colobus_angolensis_palliatus
ENSPTRG00000000557	YRDC	99	88.129	ENSCGRG00001014496	-	99	88.129	Cricetulus_griseus_chok1gshd
ENSPTRG00000000557	YRDC	98	82.182	ENSCGRG00001000829	-	77	82.182	Cricetulus_griseus_chok1gshd
ENSPTRG00000000557	YRDC	75	63.158	ENSCSEG00000019075	yrdc	75	63.158	Cynoglossus_semilaevis
ENSPTRG00000000557	YRDC	82	56.710	ENSCVAG00000017355	yrdc	85	57.018	Cyprinodon_variegatus
ENSPTRG00000000557	YRDC	83	57.872	ENSDARG00000041428	yrdc	97	58.120	Danio_rerio
ENSPTRG00000000557	YRDC	73	63.592	ENSDNOG00000036198	-	100	63.592	Dasypus_novemcinctus
ENSPTRG00000000557	YRDC	99	91.007	ENSDNOG00000038789	-	100	91.406	Dasypus_novemcinctus
ENSPTRG00000000557	YRDC	70	92.308	ENSDORG00000008788	Yrdc	86	92.308	Dipodomys_ordii
ENSPTRG00000000557	YRDC	71	48.515	FBgn0061361	CG33786	82	48.058	Drosophila_melanogaster
ENSPTRG00000000557	YRDC	99	75.000	ENSETEG00000003442	YRDC	99	75.000	Echinops_telfairi
ENSPTRG00000000557	YRDC	82	51.739	ENSEBUG00000014080	yrdc	95	51.739	Eptatretus_burgeri
ENSPTRG00000000557	YRDC	100	92.143	ENSEASG00005012253	YRDC	100	92.143	Equus_asinus_asinus
ENSPTRG00000000557	YRDC	100	92.500	ENSECAG00000022522	YRDC	100	92.500	Equus_caballus
ENSPTRG00000000557	YRDC	73	63.725	ENSELUG00000018071	yrdc	73	60.177	Esox_lucius
ENSPTRG00000000557	YRDC	99	92.086	ENSFCAG00000011018	YRDC	99	92.086	Felis_catus
ENSPTRG00000000557	YRDC	70	30.476	ENSFALG00000011333	-	53	30.476	Ficedula_albicollis
ENSPTRG00000000557	YRDC	70	73.711	ENSFALG00000000964	YRDC	90	72.727	Ficedula_albicollis
ENSPTRG00000000557	YRDC	82	57.143	ENSFHEG00000001029	yrdc	84	57.277	Fundulus_heteroclitus
ENSPTRG00000000557	YRDC	73	65.196	ENSGMOG00000015635	yrdc	97	65.196	Gadus_morhua
ENSPTRG00000000557	YRDC	70	30.952	ENSGALG00000025899	-	67	30.952	Gallus_gallus
ENSPTRG00000000557	YRDC	95	63.158	ENSGALG00000029001	YRDC	98	63.158	Gallus_gallus
ENSPTRG00000000557	YRDC	55	30.233	ENSGALG00000054964	-	80	30.233	Gallus_gallus
ENSPTRG00000000557	YRDC	82	55.844	ENSGAFG00000008396	yrdc	84	56.140	Gambusia_affinis
ENSPTRG00000000557	YRDC	81	59.052	ENSGACG00000013878	yrdc	95	58.874	Gasterosteus_aculeatus
ENSPTRG00000000557	YRDC	77	69.626	ENSGAGG00000014968	YRDC	93	69.626	Gopherus_agassizii
ENSPTRG00000000557	YRDC	100	99.642	ENSGGOG00000007619	YRDC	100	99.642	Gorilla_gorilla
ENSPTRG00000000557	YRDC	92	55.985	ENSHBUG00000009298	yrdc	94	55.985	Haplochromis_burtoni
ENSPTRG00000000557	YRDC	99	89.568	ENSHGLG00000014075	YRDC	99	89.568	Heterocephalus_glaber_female
ENSPTRG00000000557	YRDC	99	78.417	ENSHGLG00100002734	YRDC	99	78.417	Heterocephalus_glaber_male
ENSPTRG00000000557	YRDC	81	58.590	ENSHCOG00000006598	yrdc	88	58.850	Hippocampus_comes
ENSPTRG00000000557	YRDC	83	58.874	ENSIPUG00000014985	yrdc	94	58.874	Ictalurus_punctatus
ENSPTRG00000000557	YRDC	99	91.007	ENSSTOG00000001643	YRDC	99	91.007	Ictidomys_tridecemlineatus
ENSPTRG00000000557	YRDC	81	59.825	ENSKMAG00000013468	yrdc	84	60.088	Kryptolebias_marmoratus
ENSPTRG00000000557	YRDC	94	54.511	ENSLBEG00000027501	yrdc	97	54.511	Labrus_bergylta
ENSPTRG00000000557	YRDC	84	61.157	ENSLACG00000010689	YRDC	99	66.204	Latimeria_chalumnae
ENSPTRG00000000557	YRDC	68	32.039	ENSLACG00000017624	si:ch211-153b23.3	61	32.039	Latimeria_chalumnae
ENSPTRG00000000557	YRDC	80	61.333	ENSLOCG00000003321	yrdc	93	61.333	Lepisosteus_oculatus
ENSPTRG00000000557	YRDC	99	92.391	ENSLAFG00000017556	YRDC	99	92.391	Loxodonta_africana
ENSPTRG00000000557	YRDC	76	99.057	ENSMFAG00000003487	YRDC	100	99.057	Macaca_fascicularis
ENSPTRG00000000557	YRDC	100	98.566	ENSMMUG00000005372	YRDC	100	93.867	Macaca_mulatta
ENSPTRG00000000557	YRDC	100	98.566	ENSMNEG00000029348	YRDC	100	98.566	Macaca_nemestrina
ENSPTRG00000000557	YRDC	54	98.675	ENSMLEG00000041122	YRDC	100	98.675	Mandrillus_leucophaeus
ENSPTRG00000000557	YRDC	81	60.793	ENSMAMG00000007315	yrdc	83	60.793	Mastacembelus_armatus
ENSPTRG00000000557	YRDC	92	55.598	ENSMZEG00005006948	yrdc	94	55.598	Maylandia_zebra
ENSPTRG00000000557	YRDC	73	71.220	ENSMGAG00000002833	YRDC	100	71.220	Meleagris_gallopavo
ENSPTRG00000000557	YRDC	70	30.952	ENSMGAG00000005489	-	53	30.952	Meleagris_gallopavo
ENSPTRG00000000557	YRDC	99	93.141	ENSMICG00000031688	YRDC	99	93.141	Microcebus_murinus
ENSPTRG00000000557	YRDC	75	88.038	ENSMOCG00000000164	-	81	88.038	Microtus_ochrogaster
ENSPTRG00000000557	YRDC	81	58.333	ENSMMOG00000002119	yrdc	84	58.590	Mola_mola
ENSPTRG00000000557	YRDC	95	72.222	ENSMODG00000017750	YRDC	94	72.222	Monodelphis_domestica
ENSPTRG00000000557	YRDC	82	60.965	ENSMALG00000012471	yrdc	85	61.233	Monopterus_albus
ENSPTRG00000000557	YRDC	91	86.719	MGP_CAROLIEiJ_G0026453	Yrdc	98	94.175	Mus_caroli
ENSPTRG00000000557	YRDC	99	86.331	ENSMUSG00000028889	Yrdc	100	93.333	Mus_musculus
ENSPTRG00000000557	YRDC	99	85.612	MGP_PahariEiJ_G0028784	Yrdc	100	92.381	Mus_pahari
ENSPTRG00000000557	YRDC	99	86.691	MGP_SPRETEiJ_G0027432	Yrdc	99	86.691	Mus_spretus
ENSPTRG00000000557	YRDC	78	92.202	ENSMPUG00000014542	YRDC	87	92.202	Mustela_putorius_furo
ENSPTRG00000000557	YRDC	98	89.416	ENSMLUG00000000955	-	98	89.416	Myotis_lucifugus
ENSPTRG00000000557	YRDC	70	84.103	ENSMLUG00000024310	-	96	84.103	Myotis_lucifugus
ENSPTRG00000000557	YRDC	98	67.391	ENSMLUG00000028796	-	97	67.391	Myotis_lucifugus
ENSPTRG00000000557	YRDC	99	82.374	ENSNGAG00000019099	Yrdc	99	82.374	Nannospalax_galili
ENSPTRG00000000557	YRDC	92	55.985	ENSNBRG00000009475	yrdc	95	55.985	Neolamprologus_brichardi
ENSPTRG00000000557	YRDC	99	98.921	ENSNLEG00000011665	YRDC	100	98.921	Nomascus_leucogenys
ENSPTRG00000000557	YRDC	76	82.160	ENSMEUG00000005068	YRDC	99	82.160	Notamacropus_eugenii
ENSPTRG00000000557	YRDC	99	87.050	ENSODEG00000007401	YRDC	100	89.524	Octodon_degus
ENSPTRG00000000557	YRDC	81	59.825	ENSONIG00000016213	yrdc	94	60.088	Oreochromis_niloticus
ENSPTRG00000000557	YRDC	99	91.727	ENSOCUG00000005384	YRDC	99	92.096	Oryctolagus_cuniculus
ENSPTRG00000000557	YRDC	73	59.804	ENSORLG00000014393	yrdc	75	59.804	Oryzias_latipes
ENSPTRG00000000557	YRDC	81	55.652	ENSORLG00020019663	yrdc	86	55.895	Oryzias_latipes_hni
ENSPTRG00000000557	YRDC	81	55.217	ENSORLG00015004625	yrdc	86	55.459	Oryzias_latipes_hsok
ENSPTRG00000000557	YRDC	73	60.784	ENSOMEG00000018550	yrdc	85	56.828	Oryzias_melastigma
ENSPTRG00000000557	YRDC	99	90.545	ENSOGAG00000030474	YRDC	100	90.545	Otolemur_garnettii
ENSPTRG00000000557	YRDC	91	88.142	ENSOARG00000019873	YRDC	89	87.747	Ovis_aries
ENSPTRG00000000557	YRDC	53	100.000	ENSPPAG00000039722	-	100	100.000	Pan_paniscus
ENSPTRG00000000557	YRDC	99	92.446	ENSPPRG00000007752	YRDC	99	92.446	Panthera_pardus
ENSPTRG00000000557	YRDC	85	66.109	ENSPTIG00000019821	YRDC	67	89.103	Panthera_tigris_altaica
ENSPTRG00000000557	YRDC	100	98.566	ENSPANG00000006487	YRDC	100	95.957	Papio_anubis
ENSPTRG00000000557	YRDC	75	61.244	ENSPKIG00000004574	yrdc	76	61.244	Paramormyrops_kingsleyae
ENSPTRG00000000557	YRDC	96	59.041	ENSPSIG00000006483	YRDC	73	68.750	Pelodiscus_sinensis
ENSPTRG00000000557	YRDC	81	57.965	ENSPMGG00000004184	yrdc	86	57.965	Periophthalmus_magnuspinnatus
ENSPTRG00000000557	YRDC	64	89.385	ENSPEMG00000016985	Yrdc	90	77.727	Peromyscus_maniculatus_bairdii
ENSPTRG00000000557	YRDC	63	56.742	ENSPMAG00000002905	yrdc	96	56.742	Petromyzon_marinus
ENSPTRG00000000557	YRDC	92	72.348	ENSPCIG00000025731	YRDC	95	71.324	Phascolarctos_cinereus
ENSPTRG00000000557	YRDC	82	56.710	ENSPFOG00000023097	yrdc	84	57.018	Poecilia_formosa
ENSPTRG00000000557	YRDC	82	56.277	ENSPLAG00000020882	yrdc	84	56.579	Poecilia_latipinna
ENSPTRG00000000557	YRDC	82	56.710	ENSPMEG00000013237	yrdc	85	57.018	Poecilia_mexicana
ENSPTRG00000000557	YRDC	82	56.710	ENSPREG00000005285	yrdc	84	57.018	Poecilia_reticulata
ENSPTRG00000000557	YRDC	86	94.979	ENSPPYG00000001523	-	94	96.522	Pongo_abelii
ENSPTRG00000000557	YRDC	100	86.071	ENSPCAG00000016850	YRDC	100	86.071	Procavia_capensis
ENSPTRG00000000557	YRDC	100	92.473	ENSPCOG00000013214	YRDC	100	92.473	Propithecus_coquereli
ENSPTRG00000000557	YRDC	99	92.029	ENSPVAG00000010147	YRDC	99	92.029	Pteropus_vampyrus
ENSPTRG00000000557	YRDC	92	55.985	ENSPNYG00000013956	yrdc	94	55.985	Pundamilia_nyererei
ENSPTRG00000000557	YRDC	75	59.048	ENSPNAG00000015625	yrdc	85	59.048	Pygocentrus_nattereri
ENSPTRG00000000557	YRDC	99	87.050	ENSRNOG00000025424	Yrdc	99	87.050	Rattus_norvegicus
ENSPTRG00000000557	YRDC	100	98.566	ENSRBIG00000032289	YRDC	100	98.566	Rhinopithecus_bieti
ENSPTRG00000000557	YRDC	99	79.322	ENSRROG00000039370	YRDC	85	99.526	Rhinopithecus_roxellana
ENSPTRG00000000557	YRDC	73	99.015	ENSSBOG00000018937	YRDC	86	99.015	Saimiri_boliviensis_boliviensis
ENSPTRG00000000557	YRDC	53	81.757	ENSSHAG00000013957	-	100	81.757	Sarcophilus_harrisii
ENSPTRG00000000557	YRDC	76	63.679	ENSSFOG00015006128	yrdc	91	63.679	Scleropages_formosus
ENSPTRG00000000557	YRDC	75	62.736	ENSSMAG00000005195	yrdc	79	62.736	Scophthalmus_maximus
ENSPTRG00000000557	YRDC	54	30.000	ENSSDUG00000006736	-	83	30.000	Seriola_dumerili
ENSPTRG00000000557	YRDC	94	53.409	ENSSDUG00000009775	yrdc	98	53.409	Seriola_dumerili
ENSPTRG00000000557	YRDC	50	30.405	ENSSDUG00000006631	-	62	30.405	Seriola_dumerili
ENSPTRG00000000557	YRDC	94	53.409	ENSSLDG00000003196	yrdc	98	53.409	Seriola_lalandi_dorsalis
ENSPTRG00000000557	YRDC	79	65.179	ENSSPUG00000003946	YRDC	87	65.179	Sphenodon_punctatus
ENSPTRG00000000557	YRDC	73	60.294	ENSSPAG00000012559	yrdc	75	60.294	Stegastes_partitus
ENSPTRG00000000557	YRDC	99	90.647	ENSSSCG00000040425	YRDC	99	90.647	Sus_scrofa
ENSPTRG00000000557	YRDC	53	76.871	ENSTGUG00000001507	YRDC	100	76.871	Taeniopygia_guttata
ENSPTRG00000000557	YRDC	87	51.200	ENSTRUG00000005923	yrdc	91	54.000	Takifugu_rubripes
ENSPTRG00000000557	YRDC	57	93.038	ENSTBEG00000008863	YRDC	96	93.377	Tupaia_belangeri
ENSPTRG00000000557	YRDC	53	90.604	ENSTTRG00000013538	-	100	90.604	Tursiops_truncatus
ENSPTRG00000000557	YRDC	73	93.596	ENSUAMG00000006150	YRDC	100	93.596	Ursus_americanus
ENSPTRG00000000557	YRDC	84	74.894	ENSVPAG00000006642	YRDC	97	74.009	Vicugna_pacos
ENSPTRG00000000557	YRDC	54	88.000	ENSVVUG00000023132	-	50	88.000	Vulpes_vulpes
ENSPTRG00000000557	YRDC	82	61.803	ENSXETG00000014420	yrdc	97	62.069	Xenopus_tropicalis
ENSPTRG00000000557	YRDC	82	55.411	ENSXCOG00000000829	yrdc	94	55.702	Xiphophorus_couchianus
ENSPTRG00000000557	YRDC	82	54.545	ENSXMAG00000014606	yrdc	79	54.825	Xiphophorus_maculatus