EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000000573 (Gene tree)
Gene ID
456782
Gene Symbol
PABPC4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Minus strand
Length
16037 bases
Position
chr1:38956383-38972419
Accession
9320
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000074238PABPPF00658.182.8e-3111
ENSPTRP00000039458PABPPF00658.183.1e-3111
ENSPTRP00000074238RRM_5PF13893.68.4e-0911
ENSPTRP00000039458RRM_5PF13893.61.1e-0811
ENSPTRP00000074238RRM_1PF00076.226.8e-9214
ENSPTRP00000074238RRM_1PF00076.226.8e-9224
ENSPTRP00000074238RRM_1PF00076.226.8e-9234
ENSPTRP00000074238RRM_1PF00076.226.8e-9244
ENSPTRP00000039458RRM_1PF00076.228.7e-9214
ENSPTRP00000039458RRM_1PF00076.228.7e-9224
ENSPTRP00000039458RRM_1PF00076.228.7e-9234
ENSPTRP00000039458RRM_1PF00076.228.7e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000048629-3222XM_003307994ENSPTRP00000039458660 (aa)XP_003308042H2QZS4
ENSPTRT00000088086-3124XM_003307995ENSPTRP00000074238631 (aa)XP_003308043K7BG41
Gene Model
Click here to download ENSPTRG00000000573's gene model file
Pathways
Pathway IDPathway NameSource
ptr03013RNA transportKEGG
ptr03015mRNA surveillance pathwayKEGG
ptr03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000000573's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000000573PABPC45837.500ENSPTRG00000002284CELF26237.500
ENSPTRG00000000573PABPC45730.189ENSPTRG00000023495TIA18530.189
ENSPTRG00000000573PABPC45876.650ENSPTRG00000028252-9976.650
ENSPTRG00000000573PABPC45761.489ENSPTRG00000047501-9862.136
ENSPTRG00000000573PABPC45931.579ENSPTRG00000020830ELAVL28934.940
ENSPTRG00000000573PABPC49973.220ENSPTRG00000022593PABPC39973.239
ENSPTRG00000000573PABPC46067.135ENSPTRG00000022078PABPC59666.942
ENSPTRG00000000573PABPC45855.049ENSPTRG00000045319-9855.049
ENSPTRG00000000573PABPC45831.395ENSPTRG00000002996TIAL17631.395
ENSPTRG00000000573PABPC45932.099ENSPTRG00000000723ELAVL48930.921
ENSPTRG00000000573PABPC46177.778ENSPTRG00000013531PABPC1L9977.778
ENSPTRG00000000573PABPC45830.961ENSPTRG00000010413ELAVL19430.961
ENSPTRG00000000573PABPC49978.471ENSPTRG00000047939PABPC19978.315
ENSPTRG00000000573PABPC46034.722ENSPTRG00000010506ELAVL39233.735
ENSPTRG00000000573PABPC46174.691ENSPTRG00000045513-7874.691
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000000573PABPC4100100.000ENSG00000090621PABPC4100100.000Homo_sapiens
ENSPTRG00000000573PABPC49983.201ENSAPOG00000001161pabpc410082.298Acanthochromis_polyacanthus
ENSPTRG00000000573PABPC410098.939ENSAMEG00000011535-10098.939Ailuropoda_melanoleuca
ENSPTRG00000000573PABPC49857.556ENSAMEG00000015083-9957.235Ailuropoda_melanoleuca
ENSPTRG00000000573PABPC410083.438ENSACIG00000023343pabpc410084.062Amphilophus_citrinellus
ENSPTRG00000000573PABPC49983.360ENSAOCG00000021529pabpc410090.583Amphiprion_ocellaris
ENSPTRG00000000573PABPC49983.360ENSAPEG00000019196pabpc410083.594Amphiprion_percula
ENSPTRG00000000573PABPC49982.622ENSATEG00000007402pabpc410082.426Anabas_testudineus
ENSPTRG00000000573PABPC49991.429ENSAPLG00000009729-10091.429Anas_platyrhynchos
ENSPTRG00000000573PABPC49990.161ENSACAG00000002544PABPC410090.161Anolis_carolinensis
ENSPTRG00000000573PABPC410099.848ENSANAG00000025079PABPC410099.848Aotus_nancymaae
ENSPTRG00000000573PABPC410082.969ENSACLG00000019558pabpc410083.048Astatotilapia_calliptera
ENSPTRG00000000573PABPC49978.922ENSAMXG00000018779pabpc49979.556Astyanax_mexicanus
ENSPTRG00000000573PABPC410096.520ENSBTAG00000017125PABPC410096.520Bos_taurus
ENSPTRG00000000573PABPC45786.826ENSBTAG00000048536-9886.826Bos_taurus
ENSPTRG00000000573PABPC47790.164ENSCJAG00000045953-9290.123Callithrix_jacchus
ENSPTRG00000000573PABPC410099.697ENSCJAG00000002512-10099.697Callithrix_jacchus
ENSPTRG00000000573PABPC410099.208ENSCAFG00000003081PABPC410099.208Canis_familiaris
ENSPTRG00000000573PABPC410099.091ENSCAFG00020004161PABPC410099.091Canis_lupus_dingo
ENSPTRG00000000573PABPC410098.939ENSCHIG00000019398-10098.939Capra_hircus
ENSPTRG00000000573PABPC410076.515ENSCHIG00000023385-10076.515Capra_hircus
ENSPTRG00000000573PABPC410099.394ENSTSYG00000006532PABPC410099.394Carlito_syrichta
ENSPTRG00000000573PABPC49999.392ENSCAPG00000015984PABPC410099.392Cavia_aperea
ENSPTRG00000000573PABPC410099.394ENSCPOG00000009552PABPC410099.394Cavia_porcellus
ENSPTRG00000000573PABPC410099.848ENSCCAG00000037306PABPC410099.848Cebus_capucinus
ENSPTRG00000000573PABPC410099.848ENSCATG00000042164PABPC410099.848Cercocebus_atys
ENSPTRG00000000573PABPC410099.091ENSCLAG00000011899PABPC410099.091Chinchilla_lanigera
ENSPTRG00000000573PABPC410099.848ENSCSAG00000001135PABPC410099.848Chlorocebus_sabaeus
ENSPTRG00000000573PABPC48697.361ENSCHOG00000005327PABPC48197.361Choloepus_hoffmanni
ENSPTRG00000000573PABPC49991.746ENSCPBG00000001038PABPC410091.746Chrysemys_picta_bellii
ENSPTRG00000000573PABPC49999.693ENSCANG00000034177PABPC410099.693Colobus_angolensis_palliatus
ENSPTRG00000000573PABPC410097.289ENSCGRG00001018166Pabpc410097.289Cricetulus_griseus_chok1gshd
ENSPTRG00000000573PABPC49994.809ENSCGRG00000009777Pabpc410094.809Cricetulus_griseus_crigri
ENSPTRG00000000573PABPC410082.344ENSCSEG00000000130pabpc410082.426Cynoglossus_semilaevis
ENSPTRG00000000573PABPC49983.466ENSCVAG00000019246pabpc410083.703Cyprinodon_variegatus
ENSPTRG00000000573PABPC49984.921ENSDARG00000059259pabpc410085.691Danio_rerio
ENSPTRG00000000573PABPC49999.464ENSDNOG00000018444-10099.464Dasypus_novemcinctus
ENSPTRG00000000573PABPC410096.970ENSDORG00000011581Pabpc410096.970Dipodomys_ordii
ENSPTRG00000000573PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSPTRG00000000573PABPC48665.185ENSETEG00000009172-9965.201Echinops_telfairi
ENSPTRG00000000573PABPC49776.898ENSEBUG00000013782pabpc49976.108Eptatretus_burgeri
ENSPTRG00000000573PABPC49976.582ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSPTRG00000000573PABPC410099.545ENSEASG00005014119PABPC410099.545Equus_asinus_asinus
ENSPTRG00000000573PABPC410099.545ENSECAG00000009396PABPC410099.545Equus_caballus
ENSPTRG00000000573PABPC410096.212ENSEEUG00000002962PABPC410096.212Erinaceus_europaeus
ENSPTRG00000000573PABPC49983.439ENSELUG00000003195pabpc49884.019Esox_lucius
ENSPTRG00000000573PABPC410099.242ENSFCAG00000015254-10099.242Felis_catus
ENSPTRG00000000573PABPC49990.952ENSFALG00000000543PABPC410090.952Ficedula_albicollis
ENSPTRG00000000573PABPC49067.284ENSFDAG00000010581-10063.361Fukomys_damarensis
ENSPTRG00000000573PABPC410099.394ENSFDAG00000020016-10099.394Fukomys_damarensis
ENSPTRG00000000573PABPC410083.255ENSFHEG00000007548pabpc49688.571Fundulus_heteroclitus
ENSPTRG00000000573PABPC49982.808ENSGMOG00000019025pabpc49983.438Gadus_morhua
ENSPTRG00000000573PABPC49991.746ENSGALG00000003800PABPC410091.746Gallus_gallus
ENSPTRG00000000573PABPC49990.330ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSPTRG00000000573PABPC410081.435ENSGACG00000007179pabpc410082.059Gasterosteus_aculeatus
ENSPTRG00000000573PABPC49991.587ENSGAGG00000001888PABPC410091.587Gopherus_agassizii
ENSPTRG00000000573PABPC4100100.000ENSGGOG00000004002PABPC4100100.000Gorilla_gorilla
ENSPTRG00000000573PABPC410083.125ENSHBUG00000020206pabpc410083.204Haplochromis_burtoni
ENSPTRG00000000573PABPC410099.545ENSHGLG00000011162PABPC410099.545Heterocephalus_glaber_female
ENSPTRG00000000573PABPC410099.525ENSHGLG00100001580PABPC410099.525Heterocephalus_glaber_male
ENSPTRG00000000573PABPC410082.316ENSHCOG00000012694pabpc410082.942Hippocampus_comes
ENSPTRG00000000573PABPC49883.146ENSIPUG00000016620pabpc49983.176Ictalurus_punctatus
ENSPTRG00000000573PABPC410096.970ENSSTOG00000010416PABPC410096.970Ictidomys_tridecemlineatus
ENSPTRG00000000573PABPC410094.697ENSJJAG00000007781Pabpc410094.697Jaculus_jaculus
ENSPTRG00000000573PABPC49982.677ENSKMAG00000013597pabpc49982.188Kryptolebias_marmoratus
ENSPTRG00000000573PABPC410082.582ENSLBEG00000013654pabpc410082.143Labrus_bergylta
ENSPTRG00000000573PABPC49988.013ENSLACG00000011907PABPC410088.013Latimeria_chalumnae
ENSPTRG00000000573PABPC49985.354ENSLOCG00000001877pabpc49986.142Lepisosteus_oculatus
ENSPTRG00000000573PABPC410099.091ENSLAFG00000000151PABPC410099.091Loxodonta_africana
ENSPTRG00000000573PABPC410099.848ENSMFAG00000041481PABPC410099.848Macaca_fascicularis
ENSPTRG00000000573PABPC410099.848ENSMMUG00000007497PABPC410099.848Macaca_mulatta
ENSPTRG00000000573PABPC410099.697ENSMNEG00000043054PABPC410099.697Macaca_nemestrina
ENSPTRG00000000573PABPC410099.848ENSMLEG00000040716PABPC410099.848Mandrillus_leucophaeus
ENSPTRG00000000573PABPC49983.201ENSMAMG00000010025pabpc49982.059Mastacembelus_armatus
ENSPTRG00000000573PABPC410082.812ENSMZEG00005006141pabpc410082.893Maylandia_zebra
ENSPTRG00000000573PABPC49987.905ENSMGAG00000005408PABPC410087.905Meleagris_gallopavo
ENSPTRG00000000573PABPC45781.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSPTRG00000000573PABPC47289.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSPTRG00000000573PABPC476100.000ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSPTRG00000000573PABPC49984.547ENSMICG00000036729-10085.258Microcebus_murinus
ENSPTRG00000000573PABPC48996.441ENSMICG00000016633-10096.441Microcebus_murinus
ENSPTRG00000000573PABPC410097.741ENSMOCG00000006763Pabpc410097.741Microtus_ochrogaster
ENSPTRG00000000573PABPC410080.346ENSMMOG00000002363pabpc49979.507Mola_mola
ENSPTRG00000000573PABPC49889.198ENSMODG00000017657-10088.788Monodelphis_domestica
ENSPTRG00000000573PABPC45973.729ENSMODG00000018051-9173.729Monodelphis_domestica
ENSPTRG00000000573PABPC49982.780ENSMALG00000011017pabpc410082.326Monopterus_albus
ENSPTRG00000000573PABPC49983.729MGP_CAROLIEiJ_G0024864-10083.729Mus_caroli
ENSPTRG00000000573PABPC410097.424MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSPTRG00000000573PABPC410097.879ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSPTRG00000000573PABPC49997.542MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSPTRG00000000573PABPC49978.603MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSPTRG00000000573PABPC49553.642ENSMPUG00000006836-10053.477Mustela_putorius_furo
ENSPTRG00000000573PABPC410099.242ENSMPUG00000014414-10099.242Mustela_putorius_furo
ENSPTRG00000000573PABPC410096.672ENSMLUG00000012068PABPC410096.672Myotis_lucifugus
ENSPTRG00000000573PABPC410096.818ENSNGAG00000018292Pabpc410096.818Nannospalax_galili
ENSPTRG00000000573PABPC45992.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSPTRG00000000573PABPC46786.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSPTRG00000000573PABPC410099.842ENSNLEG00000011928PABPC410099.842Nomascus_leucogenys
ENSPTRG00000000573PABPC48598.737ENSOPRG00000011984PABPC48798.737Ochotona_princeps
ENSPTRG00000000573PABPC410098.485ENSODEG00000006592-10098.485Octodon_degus
ENSPTRG00000000573PABPC45385.714ENSODEG00000013457-10085.714Octodon_degus
ENSPTRG00000000573PABPC49989.322ENSODEG00000017434-10089.206Octodon_degus
ENSPTRG00000000573PABPC410083.125ENSONIG00000008176pabpc410083.750Oreochromis_niloticus
ENSPTRG00000000573PABPC49991.270ENSOANG00000010001PABPC410091.270Ornithorhynchus_anatinus
ENSPTRG00000000573PABPC49699.209ENSOCUG00000000562PABPC48899.209Oryctolagus_cuniculus
ENSPTRG00000000573PABPC49990.741ENSORLG00000017479pabpc49990.741Oryzias_latipes
ENSPTRG00000000573PABPC49990.741ENSORLG00020018644pabpc49990.741Oryzias_latipes_hni
ENSPTRG00000000573PABPC49990.741ENSORLG00015015042pabpc49990.741Oryzias_latipes_hsok
ENSPTRG00000000573PABPC49983.043ENSOMEG00000014410pabpc49983.491Oryzias_melastigma
ENSPTRG00000000573PABPC410096.833ENSOGAG00000004067PABPC410096.833Otolemur_garnettii
ENSPTRG00000000573PABPC410098.939ENSOARG00000020060PABPC410098.939Ovis_aries
ENSPTRG00000000573PABPC4100100.000ENSPPAG00000043625PABPC4100100.000Pan_paniscus
ENSPTRG00000000573PABPC410099.242ENSPPRG00000024727PABPC410099.242Panthera_pardus
ENSPTRG00000000573PABPC410099.242ENSPTIG00000005829PABPC410099.242Panthera_tigris_altaica
ENSPTRG00000000573PABPC410099.697ENSPANG00000009484PABPC410099.697Papio_anubis
ENSPTRG00000000573PABPC49984.810ENSPKIG00000025356pabpc49985.443Paramormyrops_kingsleyae
ENSPTRG00000000573PABPC49991.746ENSPSIG00000016892PABPC410091.746Pelodiscus_sinensis
ENSPTRG00000000573PABPC410081.575ENSPMGG00000009073pabpc49981.319Periophthalmus_magnuspinnatus
ENSPTRG00000000573PABPC410097.273ENSPEMG00000023569-9997.273Peromyscus_maniculatus_bairdii
ENSPTRG00000000573PABPC410091.061ENSPEMG00000024193-9991.061Peromyscus_maniculatus_bairdii
ENSPTRG00000000573PABPC48973.484ENSPMAG00000002836pabpc410073.196Petromyzon_marinus
ENSPTRG00000000573PABPC49571.311ENSPMAG00000007885pabpc410069.822Petromyzon_marinus
ENSPTRG00000000573PABPC49793.795ENSPCIG00000020674PABPC410093.571Phascolarctos_cinereus
ENSPTRG00000000573PABPC410082.629ENSPFOG00000002682pabpc410082.764Poecilia_formosa
ENSPTRG00000000573PABPC410082.473ENSPLAG00000010112pabpc410083.178Poecilia_latipinna
ENSPTRG00000000573PABPC49983.148ENSPMEG00000019739pabpc410082.919Poecilia_mexicana
ENSPTRG00000000573PABPC410083.220ENSPREG00000001589pabpc410083.220Poecilia_reticulata
ENSPTRG00000000573PABPC4100100.000ENSPPYG00000001506PABPC4100100.000Pongo_abelii
ENSPTRG00000000573PABPC410094.242ENSPCAG00000003341PABPC410094.242Procavia_capensis
ENSPTRG00000000573PABPC49982.173ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSPTRG00000000573PABPC410099.546ENSPCOG00000023725-10099.546Propithecus_coquereli
ENSPTRG00000000573PABPC49998.655ENSPVAG00000002187PABPC410098.655Pteropus_vampyrus
ENSPTRG00000000573PABPC410082.969ENSPNYG00000006134pabpc410083.048Pundamilia_nyererei
ENSPTRG00000000573PABPC410083.412ENSPNAG00000024355pabpc410084.038Pygocentrus_nattereri
ENSPTRG00000000573PABPC410095.606ENSRNOG00000015642Pabpc410095.606Rattus_norvegicus
ENSPTRG00000000573PABPC410093.485ENSRNOG00000028592AABR07035074.110093.485Rattus_norvegicus
ENSPTRG00000000573PABPC410099.848ENSRBIG00000039761PABPC410099.848Rhinopithecus_bieti
ENSPTRG00000000573PABPC410099.848ENSRROG00000033355PABPC410099.848Rhinopithecus_roxellana
ENSPTRG00000000573PABPC410099.697ENSSBOG00000026193PABPC410099.697Saimiri_boliviensis_boliviensis
ENSPTRG00000000573PABPC49892.557ENSSHAG00000018139PABPC410092.063Sarcophilus_harrisii
ENSPTRG00000000573PABPC49985.714ENSSFOG00015023514pabpc49985.714Scleropages_formosus
ENSPTRG00000000573PABPC49982.437ENSSMAG00000009007pabpc49982.104Scophthalmus_maximus
ENSPTRG00000000573PABPC49982.726ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSPTRG00000000573PABPC49982.726ENSSLDG00000013025pabpc410082.969Seriola_lalandi_dorsalis
ENSPTRG00000000573PABPC410091.970ENSSARG00000000310PABPC410091.970Sorex_araneus
ENSPTRG00000000573PABPC49990.000ENSSPUG00000003204PABPC410090.000Sphenodon_punctatus
ENSPTRG00000000573PABPC49990.562ENSSPAG00000009252pabpc49983.176Stegastes_partitus
ENSPTRG00000000573PABPC410099.091ENSSSCG00000003660-10099.091Sus_scrofa
ENSPTRG00000000573PABPC48950.337ENSSSCG00000036170-9650.337Sus_scrofa
ENSPTRG00000000573PABPC49987.595ENSTGUG00000001266PABPC410087.595Taeniopygia_guttata
ENSPTRG00000000573PABPC410082.075ENSTRUG00000005907pabpc49982.003Takifugu_rubripes
ENSPTRG00000000573PABPC410078.213ENSTNIG00000016902pabpc49978.213Tetraodon_nigroviridis
ENSPTRG00000000573PABPC49988.571ENSTBEG00000009035PABPC410088.571Tupaia_belangeri
ENSPTRG00000000573PABPC49983.525ENSTTRG00000014340PABPC410087.059Tursiops_truncatus
ENSPTRG00000000573PABPC410099.049ENSUAMG00000000303PABPC410099.049Ursus_americanus
ENSPTRG00000000573PABPC410098.939ENSUMAG00000019585PABPC410099.057Ursus_maritimus
ENSPTRG00000000573PABPC48497.872ENSVPAG00000010041PABPC47797.872Vicugna_pacos
ENSPTRG00000000573PABPC410099.208ENSVVUG00000005215PABPC410099.208Vulpes_vulpes
ENSPTRG00000000573PABPC45997.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSPTRG00000000573PABPC49983.333ENSXETG00000010946pabpc410083.333Xenopus_tropicalis
ENSPTRG00000000573PABPC49989.091ENSXCOG00000013190pabpc49689.623Xiphophorus_couchianus
ENSPTRG00000000573PABPC410082.786ENSXMAG00000019007pabpc410083.022Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us