EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000000739 (Gene tree)
Gene ID: 456858
Gene Symbol: PRPF38A
Alias: -
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 13703 bases
Position: chr1:52078044-52091746
Accession: 1471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000084392	PRP38	PF03371.15	2.3e-62	1	1
ENSPTRP00000041680	PRP38	PF03371.15	2.6e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000001401	-	2722	XM_009457838	ENSPTRP00000041680	312 (aa)	XP_009456113	H2R123
ENSPTRT00000094312	-	900	-	ENSPTRP00000084392	299 (aa)	-	A0A2I3T583

Gene Model

Click here to download ENSPTRG00000000739's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000000739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000000739	PRPF38A	100	77.885	ENSPTRG00000051767	-	100	77.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000000739	PRPF38A	100	100.000	ENSG00000134748	PRPF38A	100	100.000	Homo_sapiens
ENSPTRG00000000739	PRPF38A	74	88.688	ENSAPOG00000011652	prpf38a	100	81.789	Acanthochromis_polyacanthus
ENSPTRG00000000739	PRPF38A	100	100.000	ENSAMEG00000009319	PRPF38A	100	100.000	Ailuropoda_melanoleuca
ENSPTRG00000000739	PRPF38A	74	86.425	ENSACIG00000012292	prpf38a	83	81.853	Amphilophus_citrinellus
ENSPTRG00000000739	PRPF38A	74	88.688	ENSAOCG00000018004	prpf38a	100	81.789	Amphiprion_ocellaris
ENSPTRG00000000739	PRPF38A	74	88.688	ENSAPEG00000021414	prpf38a	100	81.789	Amphiprion_percula
ENSPTRG00000000739	PRPF38A	74	89.140	ENSATEG00000004608	prpf38a	100	81.789	Anabas_testudineus
ENSPTRG00000000739	PRPF38A	79	97.571	ENSAPLG00000005827	PRPF38A	99	97.571	Anas_platyrhynchos
ENSPTRG00000000739	PRPF38A	100	95.833	ENSACAG00000008249	PRPF38A	100	95.833	Anolis_carolinensis
ENSPTRG00000000739	PRPF38A	100	67.722	ENSANAG00000029204	-	100	62.342	Aotus_nancymaae
ENSPTRG00000000739	PRPF38A	100	100.000	ENSANAG00000027839	PRPF38A	100	100.000	Aotus_nancymaae
ENSPTRG00000000739	PRPF38A	74	86.425	ENSACLG00000021595	prpf38a	100	80.192	Astatotilapia_calliptera
ENSPTRG00000000739	PRPF38A	100	82.428	ENSAMXG00000029274	prpf38a	100	82.428	Astyanax_mexicanus
ENSPTRG00000000739	PRPF38A	100	100.000	ENSBTAG00000002720	PRPF38A	100	100.000	Bos_taurus
ENSPTRG00000000739	PRPF38A	65	62.564	WBGene00008380	prp-38	67	61.574	Caenorhabditis_elegans
ENSPTRG00000000739	PRPF38A	100	100.000	ENSCJAG00000021594	PRPF38A	100	100.000	Callithrix_jacchus
ENSPTRG00000000739	PRPF38A	100	100.000	ENSCAFG00000003740	PRPF38A	100	100.000	Canis_familiaris
ENSPTRG00000000739	PRPF38A	100	100.000	ENSCAFG00020010939	PRPF38A	100	100.000	Canis_lupus_dingo
ENSPTRG00000000739	PRPF38A	100	100.000	ENSCHIG00000024730	PRPF38A	100	100.000	Capra_hircus
ENSPTRG00000000739	PRPF38A	86	98.885	ENSTSYG00000031994	-	95	98.885	Carlito_syrichta
ENSPTRG00000000739	PRPF38A	100	100.000	ENSTSYG00000009868	-	100	100.000	Carlito_syrichta
ENSPTRG00000000739	PRPF38A	100	100.000	ENSCPOG00000005079	PRPF38A	100	100.000	Cavia_porcellus
ENSPTRG00000000739	PRPF38A	100	99.679	ENSCCAG00000026502	PRPF38A	100	99.679	Cebus_capucinus
ENSPTRG00000000739	PRPF38A	100	64.423	ENSCATG00000044190	-	100	63.141	Cercocebus_atys
ENSPTRG00000000739	PRPF38A	100	100.000	ENSCATG00000032296	PRPF38A	100	100.000	Cercocebus_atys
ENSPTRG00000000739	PRPF38A	100	100.000	ENSCLAG00000005816	PRPF38A	100	100.000	Chinchilla_lanigera
ENSPTRG00000000739	PRPF38A	78	97.917	ENSCHOG00000008388	PRPF38A	77	97.917	Choloepus_hoffmanni
ENSPTRG00000000739	PRPF38A	100	98.077	ENSCPBG00000014791	PRPF38A	100	98.077	Chrysemys_picta_bellii
ENSPTRG00000000739	PRPF38A	71	71.362	ENSCSAVG00000009580	-	78	66.102	Ciona_savignyi
ENSPTRG00000000739	PRPF38A	96	100.000	ENSCANG00000032608	PRPF38A	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000000739	PRPF38A	100	99.679	ENSCGRG00001018502	-	100	99.679	Cricetulus_griseus_chok1gshd
ENSPTRG00000000739	PRPF38A	77	84.848	ENSCGRG00001002557	-	78	84.848	Cricetulus_griseus_chok1gshd
ENSPTRG00000000739	PRPF38A	100	99.679	ENSCGRG00000014868	Prpf38a	100	99.679	Cricetulus_griseus_crigri
ENSPTRG00000000739	PRPF38A	74	87.783	ENSCSEG00000001269	prpf38a	87	83.398	Cynoglossus_semilaevis
ENSPTRG00000000739	PRPF38A	74	90.498	ENSCVAG00000012305	prpf38a	100	82.428	Cyprinodon_variegatus
ENSPTRG00000000739	PRPF38A	100	81.789	ENSDARG00000039213	prpf38a	100	81.789	Danio_rerio
ENSPTRG00000000739	PRPF38A	100	100.000	ENSDNOG00000042326	PRPF38A	100	100.000	Dasypus_novemcinctus
ENSPTRG00000000739	PRPF38A	100	86.538	ENSDORG00000023857	-	100	86.538	Dipodomys_ordii
ENSPTRG00000000739	PRPF38A	88	80.682	ENSDORG00000025371	-	78	87.665	Dipodomys_ordii
ENSPTRG00000000739	PRPF38A	88	80.682	ENSDORG00000023691	-	78	87.665	Dipodomys_ordii
ENSPTRG00000000739	PRPF38A	66	75.635	FBgn0050342	Prp38	57	76.596	Drosophila_melanogaster
ENSPTRG00000000739	PRPF38A	79	81.092	ENSEBUG00000012588	prpf38a	83	77.778	Eptatretus_burgeri
ENSPTRG00000000739	PRPF38A	100	100.000	ENSEASG00005014427	PRPF38A	100	100.000	Equus_asinus_asinus
ENSPTRG00000000739	PRPF38A	100	100.000	ENSECAG00000022628	PRPF38A	100	100.000	Equus_caballus
ENSPTRG00000000739	PRPF38A	74	86.878	ENSELUG00000021094	prpf38a	100	80.511	Esox_lucius
ENSPTRG00000000739	PRPF38A	100	100.000	ENSFCAG00000002518	PRPF38A	100	100.000	Felis_catus
ENSPTRG00000000739	PRPF38A	87	96.679	ENSFALG00000005598	-	100	96.679	Ficedula_albicollis
ENSPTRG00000000739	PRPF38A	99	84.887	ENSFALG00000003612	-	83	84.496	Ficedula_albicollis
ENSPTRG00000000739	PRPF38A	100	99.679	ENSFDAG00000011287	PRPF38A	100	99.679	Fukomys_damarensis
ENSPTRG00000000739	PRPF38A	87	77.992	ENSFHEG00000014317	prpf38a	87	84.942	Fundulus_heteroclitus
ENSPTRG00000000739	PRPF38A	56	94.578	ENSGMOG00000011384	prpf38a	54	94.578	Gadus_morhua
ENSPTRG00000000739	PRPF38A	100	97.756	ENSGALG00000010627	PRPF38A	100	97.756	Gallus_gallus
ENSPTRG00000000739	PRPF38A	74	90.498	ENSGAFG00000012422	prpf38a	100	82.428	Gambusia_affinis
ENSPTRG00000000739	PRPF38A	74	86.099	ENSGACG00000005423	prpf38a	100	79.365	Gasterosteus_aculeatus
ENSPTRG00000000739	PRPF38A	100	98.397	ENSGAGG00000020547	PRPF38A	100	98.397	Gopherus_agassizii
ENSPTRG00000000739	PRPF38A	100	100.000	ENSGGOG00000003940	PRPF38A	100	100.000	Gorilla_gorilla
ENSPTRG00000000739	PRPF38A	63	91.005	ENSHBUG00000020572	prpf38a	80	90.957	Haplochromis_burtoni
ENSPTRG00000000739	PRPF38A	100	100.000	ENSHGLG00000000475	PRPF38A	100	100.000	Heterocephalus_glaber_female
ENSPTRG00000000739	PRPF38A	100	83.654	ENSHGLG00000007918	-	100	83.333	Heterocephalus_glaber_female
ENSPTRG00000000739	PRPF38A	100	83.654	ENSHGLG00100003928	-	100	83.333	Heterocephalus_glaber_male
ENSPTRG00000000739	PRPF38A	100	100.000	ENSHGLG00100008935	PRPF38A	100	100.000	Heterocephalus_glaber_male
ENSPTRG00000000739	PRPF38A	87	69.373	ENSHCOG00000020781	prpf38a	59	90.957	Hippocampus_comes
ENSPTRG00000000739	PRPF38A	77	87.500	ENSIPUG00000005757	prpf38a	82	83.398	Ictalurus_punctatus
ENSPTRG00000000739	PRPF38A	100	100.000	ENSSTOG00000015610	PRPF38A	100	100.000	Ictidomys_tridecemlineatus
ENSPTRG00000000739	PRPF38A	100	98.718	ENSJJAG00000015811	Prpf38a	100	98.718	Jaculus_jaculus
ENSPTRG00000000739	PRPF38A	74	90.045	ENSKMAG00000006588	prpf38a	100	82.109	Kryptolebias_marmoratus
ENSPTRG00000000739	PRPF38A	96	79.195	ENSLBEG00000020585	prpf38a	100	79.553	Labrus_bergylta
ENSPTRG00000000739	PRPF38A	100	92.308	ENSLACG00000011495	PRPF38A	100	92.308	Latimeria_chalumnae
ENSPTRG00000000739	PRPF38A	100	80.192	ENSLOCG00000006262	prpf38a	100	81.470	Lepisosteus_oculatus
ENSPTRG00000000739	PRPF38A	100	100.000	ENSLAFG00000025862	PRPF38A	100	100.000	Loxodonta_africana
ENSPTRG00000000739	PRPF38A	100	100.000	ENSMFAG00000039449	PRPF38A	100	100.000	Macaca_fascicularis
ENSPTRG00000000739	PRPF38A	87	99.265	ENSMMUG00000014333	PRPF38A	98	99.265	Macaca_mulatta
ENSPTRG00000000739	PRPF38A	100	64.744	ENSMNEG00000040242	-	100	63.782	Macaca_nemestrina
ENSPTRG00000000739	PRPF38A	100	100.000	ENSMNEG00000031221	PRPF38A	100	100.000	Macaca_nemestrina
ENSPTRG00000000739	PRPF38A	100	100.000	ENSMLEG00000041105	PRPF38A	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000000739	PRPF38A	74	88.235	ENSMAMG00000015431	prpf38a	100	81.470	Mastacembelus_armatus
ENSPTRG00000000739	PRPF38A	74	86.425	ENSMZEG00005017838	prpf38a	100	80.192	Maylandia_zebra
ENSPTRG00000000739	PRPF38A	96	97.659	ENSMGAG00000011176	PRPF38A	100	97.659	Meleagris_gallopavo
ENSPTRG00000000739	PRPF38A	89	90.943	ENSMAUG00000018029	-	98	91.506	Mesocricetus_auratus
ENSPTRG00000000739	PRPF38A	100	100.000	ENSMICG00000014193	PRPF38A	100	100.000	Microcebus_murinus
ENSPTRG00000000739	PRPF38A	100	99.679	ENSMOCG00000013080	Prpf38a	100	99.679	Microtus_ochrogaster
ENSPTRG00000000739	PRPF38A	87	81.467	ENSMMOG00000016972	prpf38a	89	81.853	Mola_mola
ENSPTRG00000000739	PRPF38A	100	98.403	ENSMODG00000000644	PRPF38A	100	98.403	Monodelphis_domestica
ENSPTRG00000000739	PRPF38A	74	88.235	ENSMALG00000019363	prpf38a	97	81.470	Monopterus_albus
ENSPTRG00000000739	PRPF38A	100	98.718	MGP_CAROLIEiJ_G0026269	Prpf38a	100	98.718	Mus_caroli
ENSPTRG00000000739	PRPF38A	100	98.718	ENSMUSG00000063800	Prpf38a	100	98.718	Mus_musculus
ENSPTRG00000000739	PRPF38A	100	98.718	MGP_PahariEiJ_G0028602	Prpf38a	100	98.718	Mus_pahari
ENSPTRG00000000739	PRPF38A	100	98.397	MGP_SPRETEiJ_G0027238	Prpf38a	100	98.522	Mus_spretus
ENSPTRG00000000739	PRPF38A	100	100.000	ENSMPUG00000006896	PRPF38A	100	100.000	Mustela_putorius_furo
ENSPTRG00000000739	PRPF38A	100	99.679	ENSNGAG00000011884	Prpf38a	100	99.679	Nannospalax_galili
ENSPTRG00000000739	PRPF38A	74	85.068	ENSNBRG00000004013	prpf38a	82	80.695	Neolamprologus_brichardi
ENSPTRG00000000739	PRPF38A	93	100.000	ENSNLEG00000017999	PRPF38A	93	100.000	Nomascus_leucogenys
ENSPTRG00000000739	PRPF38A	97	73.841	ENSNLEG00000012592	-	99	73.841	Nomascus_leucogenys
ENSPTRG00000000739	PRPF38A	100	67.308	ENSNLEG00000033398	-	94	67.308	Nomascus_leucogenys
ENSPTRG00000000739	PRPF38A	100	94.872	ENSMEUG00000003860	PRPF38A	100	94.872	Notamacropus_eugenii
ENSPTRG00000000739	PRPF38A	80	99.583	ENSOPRG00000008985	PRPF38A	100	99.583	Ochotona_princeps
ENSPTRG00000000739	PRPF38A	100	100.000	ENSODEG00000005869	PRPF38A	100	100.000	Octodon_degus
ENSPTRG00000000739	PRPF38A	74	86.878	ENSONIG00000007816	prpf38a	100	80.511	Oreochromis_niloticus
ENSPTRG00000000739	PRPF38A	100	64.968	ENSOANG00000009541	-	100	64.968	Ornithorhynchus_anatinus
ENSPTRG00000000739	PRPF38A	100	100.000	ENSOCUG00000000963	PRPF38A	100	100.000	Oryctolagus_cuniculus
ENSPTRG00000000739	PRPF38A	96	82.333	ENSORLG00000013485	prpf38a	99	82.372	Oryzias_latipes
ENSPTRG00000000739	PRPF38A	96	82.333	ENSORLG00020002130	prpf38a	99	82.372	Oryzias_latipes_hni
ENSPTRG00000000739	PRPF38A	96	82.000	ENSORLG00015021393	prpf38a	99	82.051	Oryzias_latipes_hsok
ENSPTRG00000000739	PRPF38A	96	81.879	ENSOMEG00000016333	prpf38a	100	81.789	Oryzias_melastigma
ENSPTRG00000000739	PRPF38A	100	100.000	ENSOGAG00000005423	PRPF38A	100	100.000	Otolemur_garnettii
ENSPTRG00000000739	PRPF38A	100	100.000	ENSOARG00000005373	PRPF38A	100	100.000	Ovis_aries
ENSPTRG00000000739	PRPF38A	100	100.000	ENSPPAG00000030905	PRPF38A	100	100.000	Pan_paniscus
ENSPTRG00000000739	PRPF38A	100	77.564	ENSPPAG00000033867	-	100	77.564	Pan_paniscus
ENSPTRG00000000739	PRPF38A	100	100.000	ENSPPRG00000013268	PRPF38A	100	100.000	Panthera_pardus
ENSPTRG00000000739	PRPF38A	100	100.000	ENSPTIG00000015419	PRPF38A	100	100.000	Panthera_tigris_altaica
ENSPTRG00000000739	PRPF38A	100	100.000	ENSPANG00000015483	PRPF38A	100	100.000	Papio_anubis
ENSPTRG00000000739	PRPF38A	100	78.846	ENSPKIG00000011439	prpf38a	100	80.128	Paramormyrops_kingsleyae
ENSPTRG00000000739	PRPF38A	100	97.756	ENSPSIG00000017487	PRPF38A	100	97.756	Pelodiscus_sinensis
ENSPTRG00000000739	PRPF38A	73	89.401	ENSPMGG00000021352	prpf38a	99	78.641	Periophthalmus_magnuspinnatus
ENSPTRG00000000739	PRPF38A	100	99.679	ENSPEMG00000023277	-	100	99.679	Peromyscus_maniculatus_bairdii
ENSPTRG00000000739	PRPF38A	100	93.651	ENSPEMG00000011212	-	100	93.651	Peromyscus_maniculatus_bairdii
ENSPTRG00000000739	PRPF38A	100	98.083	ENSPCIG00000022369	-	100	98.083	Phascolarctos_cinereus
ENSPTRG00000000739	PRPF38A	87	84.942	ENSPFOG00000004248	prpf38a	100	82.428	Poecilia_formosa
ENSPTRG00000000739	PRPF38A	96	76.949	ENSPLAG00000010328	prpf38a	100	82.428	Poecilia_latipinna
ENSPTRG00000000739	PRPF38A	88	79.182	ENSPMEG00000011804	prpf38a	100	82.428	Poecilia_mexicana
ENSPTRG00000000739	PRPF38A	96	75.694	ENSPREG00000002835	prpf38a	58	94.149	Poecilia_reticulata
ENSPTRG00000000739	PRPF38A	100	91.483	ENSPPYG00000001348	PRPF38A	100	91.483	Pongo_abelii
ENSPTRG00000000739	PRPF38A	100	99.359	ENSPCAG00000013328	PRPF38A	100	99.359	Procavia_capensis
ENSPTRG00000000739	PRPF38A	100	76.923	ENSPCOG00000020709	-	76	81.659	Propithecus_coquereli
ENSPTRG00000000739	PRPF38A	100	100.000	ENSPCOG00000016387	-	100	100.000	Propithecus_coquereli
ENSPTRG00000000739	PRPF38A	100	100.000	ENSPVAG00000009803	PRPF38A	100	100.000	Pteropus_vampyrus
ENSPTRG00000000739	PRPF38A	74	86.425	ENSPNYG00000005571	prpf38a	100	80.192	Pundamilia_nyererei
ENSPTRG00000000739	PRPF38A	100	82.428	ENSPNAG00000010399	prpf38a	100	82.428	Pygocentrus_nattereri
ENSPTRG00000000739	PRPF38A	100	99.359	ENSRNOG00000009451	Prpf38a	100	99.359	Rattus_norvegicus
ENSPTRG00000000739	PRPF38A	100	100.000	ENSRBIG00000036442	PRPF38A	100	100.000	Rhinopithecus_bieti
ENSPTRG00000000739	PRPF38A	100	62.500	ENSRBIG00000034053	-	100	59.295	Rhinopithecus_bieti
ENSPTRG00000000739	PRPF38A	98	78.758	ENSRROG00000040003	-	99	78.758	Rhinopithecus_roxellana
ENSPTRG00000000739	PRPF38A	95	55.921	ENSRROG00000034606	-	100	59.936	Rhinopithecus_roxellana
ENSPTRG00000000739	PRPF38A	100	100.000	ENSRROG00000032788	PRPF38A	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000000739	PRPF38A	100	100.000	ENSSBOG00000019515	PRPF38A	100	100.000	Saimiri_boliviensis_boliviensis
ENSPTRG00000000739	PRPF38A	87	97.786	ENSSHAG00000006906	-	100	97.786	Sarcophilus_harrisii
ENSPTRG00000000739	PRPF38A	96	71.053	ENSSHAG00000006029	-	74	81.900	Sarcophilus_harrisii
ENSPTRG00000000739	PRPF38A	100	78.914	ENSSFOG00015013572	prpf38a	100	79.553	Scleropages_formosus
ENSPTRG00000000739	PRPF38A	74	88.688	ENSSMAG00000015379	prpf38a	83	82.625	Scophthalmus_maximus
ENSPTRG00000000739	PRPF38A	74	89.140	ENSSDUG00000001324	prpf38a	100	82.109	Seriola_dumerili
ENSPTRG00000000739	PRPF38A	74	89.140	ENSSLDG00000014803	prpf38a	100	82.109	Seriola_lalandi_dorsalis
ENSPTRG00000000739	PRPF38A	100	82.692	ENSSARG00000014458	PRPF38A	100	82.692	Sorex_araneus
ENSPTRG00000000739	PRPF38A	100	96.154	ENSSPUG00000013259	PRPF38A	100	96.154	Sphenodon_punctatus
ENSPTRG00000000739	PRPF38A	74	70.588	ENSSPAG00000010449	prpf38a	100	64.103	Stegastes_partitus
ENSPTRG00000000739	PRPF38A	100	100.000	ENSSSCG00000028288	PRPF38A	100	100.000	Sus_scrofa
ENSPTRG00000000739	PRPF38A	100	93.590	ENSTGUG00000008995	PRPF38A	100	93.590	Taeniopygia_guttata
ENSPTRG00000000739	PRPF38A	74	88.235	ENSTRUG00000003374	prpf38a	71	87.446	Takifugu_rubripes
ENSPTRG00000000739	PRPF38A	74	86.547	ENSTNIG00000005533	prpf38a	100	80.000	Tetraodon_nigroviridis
ENSPTRG00000000739	PRPF38A	100	99.359	ENSTBEG00000000725	PRPF38A	100	99.359	Tupaia_belangeri
ENSPTRG00000000739	PRPF38A	100	100.000	ENSTTRG00000016139	PRPF38A	100	100.000	Tursiops_truncatus
ENSPTRG00000000739	PRPF38A	100	100.000	ENSUAMG00000000625	PRPF38A	100	100.000	Ursus_americanus
ENSPTRG00000000739	PRPF38A	100	100.000	ENSUMAG00000022674	PRPF38A	100	100.000	Ursus_maritimus
ENSPTRG00000000739	PRPF38A	95	96.820	ENSVPAG00000000907	PRPF38A	100	94.231	Vicugna_pacos
ENSPTRG00000000739	PRPF38A	100	100.000	ENSVVUG00000004475	PRPF38A	100	100.000	Vulpes_vulpes
ENSPTRG00000000739	PRPF38A	100	84.345	ENSXETG00000008060	prpf38a	100	88.179	Xenopus_tropicalis
ENSPTRG00000000739	PRPF38A	74	88.341	ENSXCOG00000007393	prpf38a	86	83.462	Xiphophorus_couchianus
ENSPTRG00000000739	PRPF38A	74	90.498	ENSXMAG00000026143	prpf38a	100	82.428	Xiphophorus_maculatus