EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000001001 (Gene tree)
Gene ID: 742372
Gene Symbol: TRMT13
Alias: -
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 17393 bases
Position: chr1:100763650-100781042
Accession: 9423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000001718	TRM13	PF05206.14	9.1e-92	1	1
ENSPTRP00000071505	TRM13	PF05206.14	2e-74	1	1
ENSPTRP00000072987	zf-U11-48K	PF05253.12	8.9e-10	1	1
ENSPTRP00000071505	zf-U11-48K	PF05253.12	4.5e-09	1	1
ENSPTRP00000001718	zf-U11-48K	PF05253.12	4.6e-09	1	1
ENSPTRP00000072987	zf-TRM13_CCCH	PF11722.8	5.8e-14	1	1
ENSPTRP00000071505	zf-TRM13_CCCH	PF11722.8	8.7e-13	1	1
ENSPTRP00000001718	zf-TRM13_CCCH	PF11722.8	8.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000087066	-	330	-	ENSPTRP00000072987	109 (aa)	-	A0A2I3S7K4
ENSPTRT00000098434	-	1443	-	ENSPTRP00000071505	480 (aa)	-	A0A2I3S3V2
ENSPTRT00000001875	-	3197	XM_001160498	ENSPTRP00000001718	481 (aa)	XP_001160498	H2PZH2

Gene Model

Click here to download ENSPTRG00000001001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000001001's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000001001	TRMT13	100	100.000	ENSG00000122435	TRMT13	100	100.000	Homo_sapiens
ENSPTRG00000001001	TRMT13	86	60.638	ENSAPOG00000015131	trmt13	99	47.800	Acanthochromis_polyacanthus
ENSPTRG00000001001	TRMT13	100	90.021	ENSAMEG00000008917	TRMT13	100	90.021	Ailuropoda_melanoleuca
ENSPTRG00000001001	TRMT13	99	50.203	ENSACIG00000005804	trmt13	98	50.203	Amphilophus_citrinellus
ENSPTRG00000001001	TRMT13	88	59.375	ENSAOCG00000023585	trmt13	99	48.708	Amphiprion_ocellaris
ENSPTRG00000001001	TRMT13	88	59.375	ENSAPEG00000004025	trmt13	99	48.317	Amphiprion_percula
ENSPTRG00000001001	TRMT13	88	64.583	ENSATEG00000006597	trmt13	98	51.357	Anabas_testudineus
ENSPTRG00000001001	TRMT13	88	66.977	ENSAPLG00000014924	TRMT13	99	66.977	Anas_platyrhynchos
ENSPTRG00000001001	TRMT13	96	64.009	ENSACAG00000003498	TRMT13	98	64.009	Anolis_carolinensis
ENSPTRG00000001001	TRMT13	100	97.248	ENSANAG00000019525	TRMT13	100	98.165	Aotus_nancymaae
ENSPTRG00000001001	TRMT13	95	53.433	ENSACLG00000020018	trmt13	98	53.433	Astatotilapia_calliptera
ENSPTRG00000001001	TRMT13	83	66.667	ENSAMXG00000017963	trmt13	97	55.246	Astyanax_mexicanus
ENSPTRG00000001001	TRMT13	100	90.021	ENSBTAG00000015781	TRMT13	100	90.021	Bos_taurus
ENSPTRG00000001001	TRMT13	100	97.248	ENSCJAG00000000200	TRMT13	99	98.165	Callithrix_jacchus
ENSPTRG00000001001	TRMT13	65	91.401	ENSCAFG00000020021	TRMT13	99	91.401	Canis_familiaris
ENSPTRG00000001001	TRMT13	100	86.364	ENSCAFG00020011572	TRMT13	95	91.273	Canis_lupus_dingo
ENSPTRG00000001001	TRMT13	100	90.229	ENSCHIG00000015395	TRMT13	100	90.229	Capra_hircus
ENSPTRG00000001001	TRMT13	98	81.992	ENSTSYG00000010811	TRMT13	99	85.000	Carlito_syrichta
ENSPTRG00000001001	TRMT13	75	69.863	ENSCAPG00000009085	TRMT13	100	70.411	Cavia_aperea
ENSPTRG00000001001	TRMT13	100	89.189	ENSCPOG00000000694	TRMT13	100	89.189	Cavia_porcellus
ENSPTRG00000001001	TRMT13	100	96.674	ENSCCAG00000023772	TRMT13	100	97.248	Cebus_capucinus
ENSPTRG00000001001	TRMT13	100	97.089	ENSCATG00000033556	TRMT13	100	97.089	Cercocebus_atys
ENSPTRG00000001001	TRMT13	89	84.543	ENSCLAG00000008220	TRMT13	100	85.246	Chinchilla_lanigera
ENSPTRG00000001001	TRMT13	100	97.713	ENSCSAG00000001506	TRMT13	100	97.713	Chlorocebus_sabaeus
ENSPTRG00000001001	TRMT13	99	68.750	ENSCPBG00000026671	TRMT13	99	68.750	Chrysemys_picta_bellii
ENSPTRG00000001001	TRMT13	100	97.921	ENSCANG00000034659	TRMT13	100	97.921	Colobus_angolensis_palliatus
ENSPTRG00000001001	TRMT13	99	85.535	ENSCGRG00001021601	Trmt13	99	85.535	Cricetulus_griseus_chok1gshd
ENSPTRG00000001001	TRMT13	53	83.268	ENSCGRG00000000093	-	99	83.268	Cricetulus_griseus_crigri
ENSPTRG00000001001	TRMT13	96	48.922	ENSCSEG00000000591	trmt13	98	48.922	Cynoglossus_semilaevis
ENSPTRG00000001001	TRMT13	96	48.542	ENSCVAG00000017342	trmt13	94	49.895	Cyprinodon_variegatus
ENSPTRG00000001001	TRMT13	95	57.759	ENSDARG00000102846	trmt13	96	57.759	Danio_rerio
ENSPTRG00000001001	TRMT13	100	81.416	ENSDNOG00000001710	TRMT13	84	88.406	Dasypus_novemcinctus
ENSPTRG00000001001	TRMT13	100	87.318	ENSDORG00000015808	Trmt13	99	87.318	Dipodomys_ordii
ENSPTRG00000001001	TRMT13	96	30.753	FBgn0037435	CG18048	95	30.753	Drosophila_melanogaster
ENSPTRG00000001001	TRMT13	99	83.929	ENSETEG00000005819	TRMT13	99	75.365	Echinops_telfairi
ENSPTRG00000001001	TRMT13	95	45.610	ENSEBUG00000014444	trmt13	96	45.690	Eptatretus_burgeri
ENSPTRG00000001001	TRMT13	100	92.661	ENSEASG00005015918	TRMT13	100	92.100	Equus_asinus_asinus
ENSPTRG00000001001	TRMT13	100	92.661	ENSECAG00000022626	TRMT13	100	92.516	Equus_caballus
ENSPTRG00000001001	TRMT13	96	83.810	ENSEEUG00000000294	TRMT13	80	80.380	Erinaceus_europaeus
ENSPTRG00000001001	TRMT13	96	55.983	ENSELUG00000003803	trmt13	98	56.438	Esox_lucius
ENSPTRG00000001001	TRMT13	100	90.644	ENSFCAG00000030618	TRMT13	100	90.826	Felis_catus
ENSPTRG00000001001	TRMT13	99	64.435	ENSFALG00000002424	TRMT13	99	64.435	Ficedula_albicollis
ENSPTRG00000001001	TRMT13	99	89.706	ENSFDAG00000006342	TRMT13	99	89.706	Fukomys_damarensis
ENSPTRG00000001001	TRMT13	83	57.778	ENSFHEG00000022954	trmt13	97	51.122	Fundulus_heteroclitus
ENSPTRG00000001001	TRMT13	95	49.011	ENSGMOG00000013223	trmt13	100	49.451	Gadus_morhua
ENSPTRG00000001001	TRMT13	95	65.284	ENSGALG00000005290	TRMT13	99	64.482	Gallus_gallus
ENSPTRG00000001001	TRMT13	85	56.383	ENSGAFG00000001577	trmt13	81	51.613	Gambusia_affinis
ENSPTRG00000001001	TRMT13	95	50.538	ENSGACG00000013428	trmt13	97	51.183	Gasterosteus_aculeatus
ENSPTRG00000001001	TRMT13	97	70.149	ENSGAGG00000023303	TRMT13	95	75.191	Gopherus_agassizii
ENSPTRG00000001001	TRMT13	100	99.083	ENSGGOG00000005616	TRMT13	100	99.083	Gorilla_gorilla
ENSPTRG00000001001	TRMT13	95	53.648	ENSHBUG00000007754	trmt13	98	53.648	Haplochromis_burtoni
ENSPTRG00000001001	TRMT13	100	89.908	ENSHGLG00000002164	TRMT13	99	90.756	Heterocephalus_glaber_female
ENSPTRG00000001001	TRMT13	100	89.908	ENSHGLG00100001618	TRMT13	99	90.756	Heterocephalus_glaber_male
ENSPTRG00000001001	TRMT13	98	47.780	ENSHCOG00000020553	trmt13	99	47.357	Hippocampus_comes
ENSPTRG00000001001	TRMT13	95	57.050	ENSIPUG00000024787	trmt13	98	58.009	Ictalurus_punctatus
ENSPTRG00000001001	TRMT13	100	92.723	ENSSTOG00000013483	TRMT13	100	92.723	Ictidomys_tridecemlineatus
ENSPTRG00000001001	TRMT13	99	87.815	ENSJJAG00000018012	Trmt13	100	87.292	Jaculus_jaculus
ENSPTRG00000001001	TRMT13	64	51.118	ENSKMAG00000007639	trmt13	92	51.118	Kryptolebias_marmoratus
ENSPTRG00000001001	TRMT13	87	64.211	ENSLBEG00000020238	trmt13	99	51.148	Labrus_bergylta
ENSPTRG00000001001	TRMT13	96	62.500	ENSLACG00000013153	TRMT13	100	61.443	Latimeria_chalumnae
ENSPTRG00000001001	TRMT13	86	69.149	ENSLOCG00000000418	trmt13	97	58.734	Lepisosteus_oculatus
ENSPTRG00000001001	TRMT13	77	88.378	ENSLAFG00000002383	TRMT13	100	88.378	Loxodonta_africana
ENSPTRG00000001001	TRMT13	100	97.297	ENSMFAG00000034681	TRMT13	100	97.297	Macaca_fascicularis
ENSPTRG00000001001	TRMT13	100	97.297	ENSMMUG00000004243	TRMT13	100	97.297	Macaca_mulatta
ENSPTRG00000001001	TRMT13	100	97.297	ENSMNEG00000036102	TRMT13	100	97.297	Macaca_nemestrina
ENSPTRG00000001001	TRMT13	100	97.089	ENSMLEG00000034258	TRMT13	100	97.089	Mandrillus_leucophaeus
ENSPTRG00000001001	TRMT13	96	51.471	ENSMAMG00000016597	trmt13	98	51.471	Mastacembelus_armatus
ENSPTRG00000001001	TRMT13	95	53.219	ENSMZEG00005020959	trmt13	98	53.219	Maylandia_zebra
ENSPTRG00000001001	TRMT13	89	66.276	ENSMGAG00000006970	TRMT13	100	66.276	Meleagris_gallopavo
ENSPTRG00000001001	TRMT13	99	83.958	ENSMAUG00000010448	Trmt13	99	83.958	Mesocricetus_auratus
ENSPTRG00000001001	TRMT13	100	92.931	ENSMICG00000005283	TRMT13	100	92.931	Microcebus_murinus
ENSPTRG00000001001	TRMT13	100	81.651	ENSMOCG00000019914	Trmt13	99	81.042	Microtus_ochrogaster
ENSPTRG00000001001	TRMT13	72	53.165	ENSMMOG00000007762	trmt13	89	50.566	Mola_mola
ENSPTRG00000001001	TRMT13	100	75.876	ENSMODG00000003646	TRMT13	100	75.876	Monodelphis_domestica
ENSPTRG00000001001	TRMT13	96	50.972	ENSMALG00000020965	trmt13	97	50.972	Monopterus_albus
ENSPTRG00000001001	TRMT13	99	87.037	MGP_CAROLIEiJ_G0025568	Trmt13	99	85.954	Mus_caroli
ENSPTRG00000001001	TRMT13	99	85.954	ENSMUSG00000033439	Trmt13	99	85.954	Mus_musculus
ENSPTRG00000001001	TRMT13	99	86.792	MGP_PahariEiJ_G0027014	Trmt13	99	86.792	Mus_pahari
ENSPTRG00000001001	TRMT13	99	86.111	MGP_SPRETEiJ_G0026518	Trmt13	99	85.954	Mus_spretus
ENSPTRG00000001001	TRMT13	100	88.073	ENSMPUG00000012169	-	98	87.970	Mustela_putorius_furo
ENSPTRG00000001001	TRMT13	79	88.714	ENSMPUG00000002078	-	100	88.714	Mustela_putorius_furo
ENSPTRG00000001001	TRMT13	100	88.991	ENSMLUG00000002124	TRMT13	100	79.418	Myotis_lucifugus
ENSPTRG00000001001	TRMT13	94	50.000	ENSNBRG00000006783	trmt13	95	50.000	Neolamprologus_brichardi
ENSPTRG00000001001	TRMT13	100	99.083	ENSNLEG00000035917	TRMT13	100	100.000	Nomascus_leucogenys
ENSPTRG00000001001	TRMT13	100	57.273	ENSMEUG00000013346	-	100	72.984	Notamacropus_eugenii
ENSPTRG00000001001	TRMT13	100	86.239	ENSOPRG00000012048	TRMT13	67	89.338	Ochotona_princeps
ENSPTRG00000001001	TRMT13	100	88.991	ENSODEG00000006075	-	95	89.820	Octodon_degus
ENSPTRG00000001001	TRMT13	95	53.433	ENSONIG00000004574	trmt13	98	53.433	Oreochromis_niloticus
ENSPTRG00000001001	TRMT13	89	74.246	ENSOANG00000012057	TRMT13	99	74.246	Ornithorhynchus_anatinus
ENSPTRG00000001001	TRMT13	100	91.060	ENSOCUG00000023095	TRMT13	100	91.060	Oryctolagus_cuniculus
ENSPTRG00000001001	TRMT13	96	48.729	ENSORLG00000003320	trmt13	99	49.364	Oryzias_latipes
ENSPTRG00000001001	TRMT13	97	49.057	ENSORLG00020005972	trmt13	98	48.504	Oryzias_latipes_hni
ENSPTRG00000001001	TRMT13	96	52.654	ENSORLG00015002270	trmt13	99	52.654	Oryzias_latipes_hsok
ENSPTRG00000001001	TRMT13	97	51.797	ENSOMEG00000006724	trmt13	95	52.220	Oryzias_melastigma
ENSPTRG00000001001	TRMT13	98	91.966	ENSOGAG00000005618	TRMT13	97	91.476	Otolemur_garnettii
ENSPTRG00000001001	TRMT13	100	90.229	ENSOARG00000017983	TRMT13	100	90.229	Ovis_aries
ENSPTRG00000001001	TRMT13	100	100.000	ENSPPAG00000043736	TRMT13	100	100.000	Pan_paniscus
ENSPTRG00000001001	TRMT13	100	91.060	ENSPPRG00000003424	TRMT13	100	91.060	Panthera_pardus
ENSPTRG00000001001	TRMT13	100	91.060	ENSPTIG00000018598	TRMT13	100	91.060	Panthera_tigris_altaica
ENSPTRG00000001001	TRMT13	100	97.713	ENSPANG00000007598	TRMT13	100	97.713	Papio_anubis
ENSPTRG00000001001	TRMT13	96	56.522	ENSPKIG00000001514	trmt13	98	56.522	Paramormyrops_kingsleyae
ENSPTRG00000001001	TRMT13	86	68.585	ENSPSIG00000012703	TRMT13	99	68.585	Pelodiscus_sinensis
ENSPTRG00000001001	TRMT13	85	64.516	ENSPMGG00000013298	trmt13	94	51.606	Periophthalmus_magnuspinnatus
ENSPTRG00000001001	TRMT13	99	82.917	ENSPEMG00000000275	Trmt13	99	82.917	Peromyscus_maniculatus_bairdii
ENSPTRG00000001001	TRMT13	88	54.000	ENSPMAG00000000823	trmt13	97	46.025	Petromyzon_marinus
ENSPTRG00000001001	TRMT13	99	75.884	ENSPCIG00000007699	TRMT13	99	76.507	Phascolarctos_cinereus
ENSPTRG00000001001	TRMT13	98	51.402	ENSPFOG00000008675	trmt13	99	49.375	Poecilia_formosa
ENSPTRG00000001001	TRMT13	96	49.364	ENSPLAG00000009709	trmt13	99	49.364	Poecilia_latipinna
ENSPTRG00000001001	TRMT13	96	47.558	ENSPMEG00000022954	trmt13	99	47.558	Poecilia_mexicana
ENSPTRG00000001001	TRMT13	88	55.000	ENSPREG00000005645	trmt13	91	50.719	Poecilia_reticulata
ENSPTRG00000001001	TRMT13	100	97.921	ENSPPYG00000001120	TRMT13	100	97.921	Pongo_abelii
ENSPTRG00000001001	TRMT13	100	87.734	ENSPCAG00000002340	TRMT13	100	87.734	Procavia_capensis
ENSPTRG00000001001	TRMT13	100	92.931	ENSPCOG00000017984	TRMT13	100	92.931	Propithecus_coquereli
ENSPTRG00000001001	TRMT13	100	91.268	ENSPVAG00000017430	TRMT13	100	91.268	Pteropus_vampyrus
ENSPTRG00000001001	TRMT13	95	51.931	ENSPNYG00000013690	trmt13	98	51.931	Pundamilia_nyererei
ENSPTRG00000001001	TRMT13	94	64.078	ENSPNAG00000022130	trmt13	99	55.603	Pygocentrus_nattereri
ENSPTRG00000001001	TRMT13	99	85.744	ENSRNOG00000015140	Trmt13	96	85.744	Rattus_norvegicus
ENSPTRG00000001001	TRMT13	100	97.921	ENSRBIG00000037686	TRMT13	100	97.921	Rhinopithecus_bieti
ENSPTRG00000001001	TRMT13	100	97.921	ENSRROG00000044057	TRMT13	100	97.921	Rhinopithecus_roxellana
ENSPTRG00000001001	TRMT13	100	97.248	ENSSBOG00000026541	TRMT13	100	98.165	Saimiri_boliviensis_boliviensis
ENSPTRG00000001001	TRMT13	91	77.346	ENSSHAG00000005213	TRMT13	97	77.346	Sarcophilus_harrisii
ENSPTRG00000001001	TRMT13	96	54.158	ENSSFOG00015017560	trmt13	98	54.624	Scleropages_formosus
ENSPTRG00000001001	TRMT13	88	61.458	ENSSMAG00000014592	trmt13	97	51.153	Scophthalmus_maximus
ENSPTRG00000001001	TRMT13	99	55.046	ENSSDUG00000015508	trmt13	99	50.101	Seriola_dumerili
ENSPTRG00000001001	TRMT13	99	55.046	ENSSLDG00000019060	trmt13	98	49.898	Seriola_lalandi_dorsalis
ENSPTRG00000001001	TRMT13	85	90.323	ENSSARG00000010344	TRMT13	97	76.623	Sorex_araneus
ENSPTRG00000001001	TRMT13	96	66.955	ENSSPUG00000016339	TRMT13	100	66.955	Sphenodon_punctatus
ENSPTRG00000001001	TRMT13	95	51.828	ENSSPAG00000011922	trmt13	98	51.915	Stegastes_partitus
ENSPTRG00000001001	TRMT13	100	90.644	ENSSSCG00000006869	TRMT13	100	90.644	Sus_scrofa
ENSPTRG00000001001	TRMT13	97	66.026	ENSTGUG00000005253	TRMT13	100	66.026	Taeniopygia_guttata
ENSPTRG00000001001	TRMT13	95	49.786	ENSTRUG00000008400	trmt13	99	49.790	Takifugu_rubripes
ENSPTRG00000001001	TRMT13	74	87.975	ENSTBEG00000008911	TRMT13	88	87.975	Tupaia_belangeri
ENSPTRG00000001001	TRMT13	70	98.684	ENSTTRG00000015302	-	60	98.684	Tursiops_truncatus
ENSPTRG00000001001	TRMT13	99	88.889	ENSUAMG00000017251	TRMT13	100	84.200	Ursus_americanus
ENSPTRG00000001001	TRMT13	100	89.813	ENSUMAG00000007901	TRMT13	100	89.813	Ursus_maritimus
ENSPTRG00000001001	TRMT13	90	73.843	ENSVPAG00000001034	TRMT13	100	73.843	Vicugna_pacos
ENSPTRG00000001001	TRMT13	99	90.852	ENSVVUG00000021996	TRMT13	99	90.852	Vulpes_vulpes
ENSPTRG00000001001	TRMT13	95	56.156	ENSXETG00000013204	trmt13	96	56.156	Xenopus_tropicalis
ENSPTRG00000001001	TRMT13	87	56.250	ENSXCOG00000008120	-	88	56.250	Xiphophorus_couchianus
ENSPTRG00000001001	TRMT13	96	48.195	ENSXMAG00000010765	trmt13	99	48.195	Xiphophorus_maculatus