EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000001267 (Gene tree)
Gene ID: 469481
Gene Symbol: SETDB1
Alias: -
Full Name: SET domain bifurcated 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 43038 bases
Position: chr1:128875951-128918988
Accession: 8102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000088144	MBD	PF01429.19	2.5e-12	1	1
ENSPTRP00000051798	MBD	PF01429.19	2.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000002349	-	4427	XM_016926689	ENSPTRP00000051798	1292 (aa)	XP_016782178	K7B3J1
ENSPTRT00000096744	-	831	XM_016926705	ENSPTRP00000072033	276 (aa)	XP_016782194	A0A2I3S5B4
ENSPTRT00000100027	-	4439	XM_016926696	ENSPTRP00000088144	1291 (aa)	XP_016782185	A0A2I3TGZ2

Gene Model

Click here to download ENSPTRG00000001267's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr00310	Lysine degradation	KEGG
ptr04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000001267's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000001267	SETDB1	100	99.768	ENSG00000143379	SETDB1	100	100.000	Homo_sapiens
ENSPTRG00000001267	SETDB1	92	62.857	ENSAPOG00000016228	setdb1b	99	68.280	Acanthochromis_polyacanthus
ENSPTRG00000001267	SETDB1	100	95.462	ENSAMEG00000001160	SETDB1	100	95.385	Ailuropoda_melanoleuca
ENSPTRG00000001267	SETDB1	92	70.109	ENSACIG00000007359	setdb1b	99	70.109	Amphilophus_citrinellus
ENSPTRG00000001267	SETDB1	89	67.010	ENSAPEG00000007774	setdb1b	92	68.282	Amphiprion_percula
ENSPTRG00000001267	SETDB1	92	62.557	ENSATEG00000023520	setdb1b	99	69.355	Anabas_testudineus
ENSPTRG00000001267	SETDB1	99	76.506	ENSAPLG00000013908	SETDB1	100	76.125	Anas_platyrhynchos
ENSPTRG00000001267	SETDB1	100	98.763	ENSANAG00000001819	SETDB1	100	98.763	Aotus_nancymaae
ENSPTRG00000001267	SETDB1	99	57.850	ENSACLG00000020489	setdb1b	98	70.270	Astatotilapia_calliptera
ENSPTRG00000001267	SETDB1	84	67.000	ENSAMXG00000016168	setdb1b	81	74.286	Astyanax_mexicanus
ENSPTRG00000001267	SETDB1	57	57.764	ENSAMXG00000010030	setdb1a	67	66.165	Astyanax_mexicanus
ENSPTRG00000001267	SETDB1	100	96.288	ENSBTAG00000000098	SETDB1	100	96.288	Bos_taurus
ENSPTRG00000001267	SETDB1	100	98.380	ENSCJAG00000006972	SETDB1	100	98.380	Callithrix_jacchus
ENSPTRG00000001267	SETDB1	100	96.065	ENSCAFG00000023501	SETDB1	100	96.216	Canis_familiaris
ENSPTRG00000001267	SETDB1	100	95.525	ENSCAFG00020013596	SETDB1	100	96.142	Canis_lupus_dingo
ENSPTRG00000001267	SETDB1	100	96.288	ENSCHIG00000010698	SETDB1	100	96.288	Capra_hircus
ENSPTRG00000001267	SETDB1	81	94.732	ENSTSYG00000012646	SETDB1	100	94.444	Carlito_syrichta
ENSPTRG00000001267	SETDB1	79	92.857	ENSCAPG00000013619	SETDB1	99	92.857	Cavia_aperea
ENSPTRG00000001267	SETDB1	100	95.437	ENSCPOG00000001632	SETDB1	100	95.282	Cavia_porcellus
ENSPTRG00000001267	SETDB1	100	98.610	ENSCCAG00000024882	SETDB1	100	98.610	Cebus_capucinus
ENSPTRG00000001267	SETDB1	100	95.511	ENSCATG00000044888	SETDB1	100	95.511	Cercocebus_atys
ENSPTRG00000001267	SETDB1	100	94.919	ENSCLAG00000000242	SETDB1	100	95.381	Chinchilla_lanigera
ENSPTRG00000001267	SETDB1	88	99.210	ENSCSAG00000018034	SETDB1	100	99.210	Chlorocebus_sabaeus
ENSPTRG00000001267	SETDB1	100	86.223	ENSCHOG00000004013	SETDB1	100	85.759	Choloepus_hoffmanni
ENSPTRG00000001267	SETDB1	99	78.686	ENSCPBG00000008716	SETDB1	100	78.168	Chrysemys_picta_bellii
ENSPTRG00000001267	SETDB1	90	96.819	ENSCANG00000036388	SETDB1	98	96.819	Colobus_angolensis_palliatus
ENSPTRG00000001267	SETDB1	100	92.189	ENSCGRG00001010822	Setdb1	100	91.725	Cricetulus_griseus_chok1gshd
ENSPTRG00000001267	SETDB1	100	91.879	ENSCGRG00000005953	Setdb1	100	91.415	Cricetulus_griseus_crigri
ENSPTRG00000001267	SETDB1	89	63.415	ENSCSEG00000002988	setdb1b	98	69.189	Cynoglossus_semilaevis
ENSPTRG00000001267	SETDB1	90	68.586	ENSCVAG00000008877	setdb1b	99	68.586	Cyprinodon_variegatus
ENSPTRG00000001267	SETDB1	97	55.515	ENSDARG00000099021	setdb1b	99	56.689	Danio_rerio
ENSPTRG00000001267	SETDB1	100	96.000	ENSDNOG00000007754	SETDB1	100	96.000	Dasypus_novemcinctus
ENSPTRG00000001267	SETDB1	100	92.664	ENSDORG00000006830	Setdb1	100	92.741	Dipodomys_ordii
ENSPTRG00000001267	SETDB1	71	47.492	ENSEBUG00000005735	setdb1b	95	47.363	Eptatretus_burgeri
ENSPTRG00000001267	SETDB1	100	96.536	ENSEASG00005002061	SETDB1	100	96.536	Equus_asinus_asinus
ENSPTRG00000001267	SETDB1	100	96.613	ENSECAG00000023954	SETDB1	100	96.613	Equus_caballus
ENSPTRG00000001267	SETDB1	83	95.798	ENSEEUG00000015825	SETDB1	83	95.798	Erinaceus_europaeus
ENSPTRG00000001267	SETDB1	74	46.746	ENSELUG00000006204	-	78	53.134	Esox_lucius
ENSPTRG00000001267	SETDB1	88	76.331	ENSELUG00000013948	setdb1b	98	76.331	Esox_lucius
ENSPTRG00000001267	SETDB1	100	93.421	ENSFCAG00000009655	SETDB1	100	93.735	Felis_catus
ENSPTRG00000001267	SETDB1	100	95.672	ENSFDAG00000021515	SETDB1	100	95.440	Fukomys_damarensis
ENSPTRG00000001267	SETDB1	90	66.842	ENSFHEG00000022195	setdb1b	99	68.586	Fundulus_heteroclitus
ENSPTRG00000001267	SETDB1	87	76.471	ENSGMOG00000005993	setdb1b	93	76.471	Gadus_morhua
ENSPTRG00000001267	SETDB1	99	73.520	ENSGALG00000024051	SETDB1	92	73.217	Gallus_gallus
ENSPTRG00000001267	SETDB1	92	58.553	ENSGAFG00000012805	setdb1b	99	60.667	Gambusia_affinis
ENSPTRG00000001267	SETDB1	87	72.674	ENSGACG00000011675	setdb1b	93	73.837	Gasterosteus_aculeatus
ENSPTRG00000001267	SETDB1	99	78.702	ENSGAGG00000005348	SETDB1	100	78.321	Gopherus_agassizii
ENSPTRG00000001267	SETDB1	100	99.690	ENSGGOG00000016308	SETDB1	100	99.690	Gorilla_gorilla
ENSPTRG00000001267	SETDB1	99	57.755	ENSHBUG00000004618	setdb1b	99	53.680	Haplochromis_burtoni
ENSPTRG00000001267	SETDB1	100	95.282	ENSHGLG00000011098	SETDB1	100	95.282	Heterocephalus_glaber_female
ENSPTRG00000001267	SETDB1	100	94.582	ENSHGLG00100009789	SETDB1	100	94.582	Heterocephalus_glaber_male
ENSPTRG00000001267	SETDB1	88	68.108	ENSHCOG00000014567	setdb1b	98	68.649	Hippocampus_comes
ENSPTRG00000001267	SETDB1	89	65.842	ENSIPUG00000004536	setdb1	98	72.067	Ictalurus_punctatus
ENSPTRG00000001267	SETDB1	100	93.698	ENSSTOG00000006770	SETDB1	100	94.077	Ictidomys_tridecemlineatus
ENSPTRG00000001267	SETDB1	87	66.842	ENSKMAG00000001197	setdb1b	91	67.368	Kryptolebias_marmoratus
ENSPTRG00000001267	SETDB1	88	67.027	ENSLBEG00000025862	setdb1b	96	67.568	Labrus_bergylta
ENSPTRG00000001267	SETDB1	99	69.155	ENSLACG00000011159	SETDB1	100	68.929	Latimeria_chalumnae
ENSPTRG00000001267	SETDB1	100	94.190	ENSLAFG00000004006	SETDB1	100	94.190	Loxodonta_africana
ENSPTRG00000001267	SETDB1	100	99.303	ENSMFAG00000042328	SETDB1	100	99.303	Macaca_fascicularis
ENSPTRG00000001267	SETDB1	100	99.226	ENSMMUG00000023235	SETDB1	100	99.226	Macaca_mulatta
ENSPTRG00000001267	SETDB1	100	99.225	ENSMNEG00000017223	SETDB1	100	99.225	Macaca_nemestrina
ENSPTRG00000001267	SETDB1	100	99.303	ENSMLEG00000033050	SETDB1	100	99.303	Mandrillus_leucophaeus
ENSPTRG00000001267	SETDB1	94	68.889	ENSMAMG00000015176	setdb1b	85	69.444	Mastacembelus_armatus
ENSPTRG00000001267	SETDB1	99	57.850	ENSMZEG00005016099	setdb1b	98	70.270	Maylandia_zebra
ENSPTRG00000001267	SETDB1	87	70.655	ENSMGAG00000001018	SETDB1	97	70.085	Meleagris_gallopavo
ENSPTRG00000001267	SETDB1	88	92.391	ENSMAUG00000021391	Setdb1	100	92.391	Mesocricetus_auratus
ENSPTRG00000001267	SETDB1	100	96.453	ENSMICG00000000425	SETDB1	100	96.453	Microcebus_murinus
ENSPTRG00000001267	SETDB1	100	91.551	ENSMOCG00000017407	Setdb1	100	91.628	Microtus_ochrogaster
ENSPTRG00000001267	SETDB1	89	64.706	ENSMMOG00000016162	setdb1b	99	68.984	Mola_mola
ENSPTRG00000001267	SETDB1	99	87.704	ENSMODG00000018821	SETDB1	90	87.471	Monodelphis_domestica
ENSPTRG00000001267	SETDB1	87	75.460	ENSMALG00000007801	setdb1b	98	75.460	Monopterus_albus
ENSPTRG00000001267	SETDB1	100	90.979	MGP_CAROLIEiJ_G0025342	Setdb1	100	90.443	Mus_caroli
ENSPTRG00000001267	SETDB1	100	90.618	ENSMUSG00000015697	Setdb1	100	90.236	Mus_musculus
ENSPTRG00000001267	SETDB1	100	90.534	ENSMPUG00000004298	SETDB1	100	90.916	Mustela_putorius_furo
ENSPTRG00000001267	SETDB1	100	92.483	ENSMLUG00000010486	SETDB1	100	92.179	Myotis_lucifugus
ENSPTRG00000001267	SETDB1	100	90.944	ENSNGAG00000020151	Setdb1	100	91.176	Nannospalax_galili
ENSPTRG00000001267	SETDB1	98	55.775	ENSNBRG00000003147	setdb1b	99	70.811	Neolamprologus_brichardi
ENSPTRG00000001267	SETDB1	100	95.875	ENSNLEG00000009996	SETDB1	100	95.875	Nomascus_leucogenys
ENSPTRG00000001267	SETDB1	100	80.108	ENSMEUG00000000555	-	100	79.877	Notamacropus_eugenii
ENSPTRG00000001267	SETDB1	87	89.113	ENSMEUG00000006544	-	88	89.084	Notamacropus_eugenii
ENSPTRG00000001267	SETDB1	97	92.105	ENSOPRG00000015349	SETDB1	100	92.105	Ochotona_princeps
ENSPTRG00000001267	SETDB1	100	95.743	ENSODEG00000012471	SETDB1	100	95.743	Octodon_degus
ENSPTRG00000001267	SETDB1	99	58.918	ENSONIG00000006454	setdb1b	99	58.935	Oreochromis_niloticus
ENSPTRG00000001267	SETDB1	100	94.213	ENSOCUG00000003642	SETDB1	100	94.290	Oryctolagus_cuniculus
ENSPTRG00000001267	SETDB1	94	66.337	ENSORLG00000010602	setdb1b	98	68.557	Oryzias_latipes
ENSPTRG00000001267	SETDB1	59	81.402	ENSORLG00020008638	setdb1b	97	60.841	Oryzias_latipes_hni
ENSPTRG00000001267	SETDB1	94	64.734	ENSORLG00015014543	setdb1b	98	66.834	Oryzias_latipes_hsok
ENSPTRG00000001267	SETDB1	91	66.667	ENSOMEG00000009457	setdb1b	99	69.792	Oryzias_melastigma
ENSPTRG00000001267	SETDB1	100	89.946	ENSOGAG00000010320	SETDB1	100	89.791	Otolemur_garnettii
ENSPTRG00000001267	SETDB1	100	95.840	ENSOARG00000020880	SETDB1	100	95.840	Ovis_aries
ENSPTRG00000001267	SETDB1	100	99.690	ENSPPAG00000041015	SETDB1	100	99.690	Pan_paniscus
ENSPTRG00000001267	SETDB1	100	95.666	ENSPPRG00000005462	SETDB1	100	95.666	Panthera_pardus
ENSPTRG00000001267	SETDB1	100	94.814	ENSPTIG00000014233	SETDB1	100	94.969	Panthera_tigris_altaica
ENSPTRG00000001267	SETDB1	100	96.749	ENSPANG00000020214	SETDB1	100	96.749	Papio_anubis
ENSPTRG00000001267	SETDB1	98	56.792	ENSPKIG00000010963	setdb1b	100	56.812	Paramormyrops_kingsleyae
ENSPTRG00000001267	SETDB1	63	73.723	ENSPSIG00000008407	SETDB1	85	79.567	Pelodiscus_sinensis
ENSPTRG00000001267	SETDB1	93	92.461	ENSPEMG00000010553	Setdb1	100	91.964	Peromyscus_maniculatus_bairdii
ENSPTRG00000001267	SETDB1	98	52.100	ENSPMAG00000001573	setdb1b	100	51.480	Petromyzon_marinus
ENSPTRG00000001267	SETDB1	99	54.736	ENSPFOG00000004429	setdb1b	97	70.270	Poecilia_formosa
ENSPTRG00000001267	SETDB1	99	56.799	ENSPFOG00000004623	-	99	56.401	Poecilia_formosa
ENSPTRG00000001267	SETDB1	94	67.553	ENSPLAG00000019076	-	99	68.617	Poecilia_latipinna
ENSPTRG00000001267	SETDB1	91	60.667	ENSPLAG00000017117	setdb1b	99	62.000	Poecilia_latipinna
ENSPTRG00000001267	SETDB1	94	67.553	ENSPMEG00000006468	setdb1b	99	68.617	Poecilia_mexicana
ENSPTRG00000001267	SETDB1	94	67.553	ENSPREG00000017459	setdb1b	99	68.617	Poecilia_reticulata
ENSPTRG00000001267	SETDB1	100	99.380	ENSPPYG00000000887	SETDB1	100	99.380	Pongo_abelii
ENSPTRG00000001267	SETDB1	85	93.551	ENSPCAG00000002527	SETDB1	100	93.551	Procavia_capensis
ENSPTRG00000001267	SETDB1	100	96.749	ENSPCOG00000027869	SETDB1	100	96.749	Propithecus_coquereli
ENSPTRG00000001267	SETDB1	94	92.635	ENSPVAG00000004355	SETDB1	93	92.842	Pteropus_vampyrus
ENSPTRG00000001267	SETDB1	89	69.730	ENSPNYG00000003997	setdb1b	90	70.270	Pundamilia_nyererei
ENSPTRG00000001267	SETDB1	89	63.850	ENSPNAG00000021617	setdb1b	52	70.652	Pygocentrus_nattereri
ENSPTRG00000001267	SETDB1	100	90.651	ENSRNOG00000021143	Setdb1	100	90.268	Rattus_norvegicus
ENSPTRG00000001267	SETDB1	100	99.225	ENSRBIG00000042359	SETDB1	100	99.225	Rhinopithecus_bieti
ENSPTRG00000001267	SETDB1	100	99.226	ENSRROG00000032628	SETDB1	100	99.226	Rhinopithecus_roxellana
ENSPTRG00000001267	SETDB1	100	98.460	ENSSBOG00000028608	SETDB1	100	98.460	Saimiri_boliviensis_boliviensis
ENSPTRG00000001267	SETDB1	100	86.641	ENSSHAG00000012701	SETDB1	100	86.167	Sarcophilus_harrisii
ENSPTRG00000001267	SETDB1	89	69.849	ENSSFOG00015022183	setdb1	99	57.589	Scleropages_formosus
ENSPTRG00000001267	SETDB1	95	61.468	ENSSMAG00000015398	setdb1b	99	65.672	Scophthalmus_maximus
ENSPTRG00000001267	SETDB1	92	64.929	ENSSDUG00000007513	setdb1b	99	68.750	Seriola_dumerili
ENSPTRG00000001267	SETDB1	56	64.929	ENSSLDG00000015209	setdb1b	99	69.072	Seriola_lalandi_dorsalis
ENSPTRG00000001267	SETDB1	99	76.768	ENSSPUG00000002969	SETDB1	100	75.814	Sphenodon_punctatus
ENSPTRG00000001267	SETDB1	100	94.981	ENSSSCG00000006645	SETDB1	100	95.135	Sus_scrofa
ENSPTRG00000001267	SETDB1	94	73.659	ENSTGUG00000004684	SETDB1	100	72.940	Taeniopygia_guttata
ENSPTRG00000001267	SETDB1	91	66.845	ENSTRUG00000014641	setdb1b	99	66.845	Takifugu_rubripes
ENSPTRG00000001267	SETDB1	99	53.333	ENSTNIG00000008065	setdb1b	99	55.115	Tetraodon_nigroviridis
ENSPTRG00000001267	SETDB1	93	95.920	ENSTBEG00000009306	SETDB1	100	95.754	Tupaia_belangeri
ENSPTRG00000001267	SETDB1	89	94.600	ENSTTRG00000006966	SETDB1	89	94.600	Tursiops_truncatus
ENSPTRG00000001267	SETDB1	100	94.996	ENSUAMG00000026724	SETDB1	100	95.227	Ursus_americanus
ENSPTRG00000001267	SETDB1	100	90.998	ENSUMAG00000003141	SETDB1	100	91.223	Ursus_maritimus
ENSPTRG00000001267	SETDB1	74	97.482	ENSVPAG00000005440	SETDB1	78	97.482	Vicugna_pacos
ENSPTRG00000001267	SETDB1	100	95.293	ENSVVUG00000011637	SETDB1	100	95.370	Vulpes_vulpes
ENSPTRG00000001267	SETDB1	99	69.901	ENSXETG00000008936	setdb1	99	69.672	Xenopus_tropicalis
ENSPTRG00000001267	SETDB1	98	56.778	ENSXCOG00000019497	setdb1b	90	72.316	Xiphophorus_couchianus
ENSPTRG00000001267	SETDB1	95	67.553	ENSXMAG00000016600	setdb1b	99	68.085	Xiphophorus_maculatus