EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000001370 (Gene tree)
Gene ID: 467033
Gene Symbol: RAB13
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 4720 bases
Position: chr1:132049745-132054464
Accession: 9891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000002305	MMR_HSR1	PF01926.23	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000078593	-	372	XM_016927721	ENSPTRP00000064692	123 (aa)	XP_016783210	A0A2I3RJ53
ENSPTRT00000002508	-	1197	XM_522433	ENSPTRP00000002305	203 (aa)	XP_522433	H2Q047

Gene Model

Click here to download ENSPTRG00000001370's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000001370's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000001370	RAB13	86	46.629	ENSPTRG00000042083	RAB39B	84	46.629
ENSPTRG00000001370	RAB13	84	51.744	ENSPTRG00000009853	RAB12	70	51.744
ENSPTRG00000001370	RAB13	62	31.429	ENSPTRG00000044739	-	67	31.429
ENSPTRG00000001370	RAB13	62	31.429	ENSPTRG00000013747	ARFRP1	67	31.429
ENSPTRG00000001370	RAB13	95	36.979	ENSPTRG00000005071	RAB5B	89	36.979
ENSPTRG00000001370	RAB13	91	54.348	ENSPTRG00000003915	RAB1B	92	54.348
ENSPTRG00000001370	RAB13	80	49.383	ENSPTRG00000004125	RAB30	80	49.383
ENSPTRG00000001370	RAB13	80	38.824	ENSPTRG00000021673	RAB9A	83	38.824
ENSPTRG00000001370	RAB13	91	42.424	ENSPTRG00000010422	RAB11B	91	42.424
ENSPTRG00000001370	RAB13	85	42.197	ENSPTRG00000001446	RAB25	81	42.197
ENSPTRG00000001370	RAB13	91	36.702	ENSPTRG00000044969	RAB22A	97	36.702
ENSPTRG00000001370	RAB13	95	37.379	ENSPTRG00000008931	RAB34	80	37.379
ENSPTRG00000001370	RAB13	95	40.000	ENSPTRG00000014682	RAB5A	89	40.000
ENSPTRG00000001370	RAB13	78	42.405	ENSPTRG00000048374	RAB6B	76	42.405
ENSPTRG00000001370	RAB13	83	35.057	ENSPTRG00000004731	RERG	84	35.057
ENSPTRG00000001370	RAB13	81	32.121	ENSPTRG00000046866	RHEB	87	32.121
ENSPTRG00000001370	RAB13	55	57.143	ENSPTRG00000006446	-	94	57.143
ENSPTRG00000001370	RAB13	95	38.614	ENSPTRG00000016455	RAB33B	88	38.614
ENSPTRG00000001370	RAB13	79	38.272	ENSPTRG00000001140	NRAS	90	38.272
ENSPTRG00000001370	RAB13	58	33.058	ENSPTRG00000048684	ARL14	60	33.058
ENSPTRG00000001370	RAB13	86	44.318	ENSPTRG00000002384	RAB18	85	44.318
ENSPTRG00000001370	RAB13	83	30.682	ENSPTRG00000011719	DNAJC27	90	30.818
ENSPTRG00000001370	RAB13	81	44.242	ENSPTRG00000021312	RAB14	77	44.242
ENSPTRG00000001370	RAB13	80	40.476	ENSPTRG00000028227	RAB9B	83	40.476
ENSPTRG00000001370	RAB13	78	43.671	ENSPTRG00000044137	RAB6A	76	43.671
ENSPTRG00000001370	RAB13	79	37.423	ENSPTRG00000015445	MRAS	78	37.423
ENSPTRG00000001370	RAB13	91	36.757	ENSPTRG00000004775	KRAS	98	37.436
ENSPTRG00000001370	RAB13	79	39.506	ENSPTRG00000034469	HRAS	85	39.506
ENSPTRG00000001370	RAB13	80	38.323	ENSPTRG00000015359	RAB7A	81	38.323
ENSPTRG00000001370	RAB13	83	47.929	ENSPTRG00000020284	RAB2A	80	47.929
ENSPTRG00000001370	RAB13	86	46.629	ENSPTRG00000048400	-	84	46.629
ENSPTRG00000001370	RAB13	95	37.500	ENSPTRG00000009194	RAB5C	89	37.500
ENSPTRG00000001370	RAB13	97	51.269	ENSPTRG00000011989	RAB1A	96	51.269
ENSPTRG00000001370	RAB13	81	38.182	ENSPTRG00000043341	RAB23	69	38.182
ENSPTRG00000001370	RAB13	67	30.882	ENSPTRG00000019651	ARF5	72	30.882
ENSPTRG00000001370	RAB13	83	48.214	ENSPTRG00000006125	-	93	48.214
ENSPTRG00000001370	RAB13	81	47.273	ENSPTRG00000044358	-	76	47.273
ENSPTRG00000001370	RAB13	84	55.294	ENSPTRG00000005524	RAB35	84	55.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000001370	RAB13	100	100.000	ENSG00000143545	RAB13	100	100.000	Homo_sapiens
ENSPTRG00000001370	RAB13	99	75.124	ENSACIG00000008584	rab13	97	75.124	Amphilophus_citrinellus
ENSPTRG00000001370	RAB13	100	98.522	ENSANAG00000030247	-	100	98.522	Aotus_nancymaae
ENSPTRG00000001370	RAB13	99	78.713	ENSAMXG00000030712	rab13	99	78.713	Astyanax_mexicanus
ENSPTRG00000001370	RAB13	100	98.030	ENSBTAG00000017604	RAB13	100	98.030	Bos_taurus
ENSPTRG00000001370	RAB13	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSPTRG00000001370	RAB13	100	98.030	ENSCJAG00000009933	-	100	98.030	Callithrix_jacchus
ENSPTRG00000001370	RAB13	100	97.537	ENSCHIG00000022271	-	100	97.537	Capra_hircus
ENSPTRG00000001370	RAB13	99	91.089	ENSCPOG00000011491	-	99	91.089	Cavia_porcellus
ENSPTRG00000001370	RAB13	100	99.507	ENSCCAG00000028502	-	100	99.507	Cebus_capucinus
ENSPTRG00000001370	RAB13	100	100.000	ENSCATG00000041779	-	100	100.000	Cercocebus_atys
ENSPTRG00000001370	RAB13	100	91.133	ENSCLAG00000006603	-	100	91.133	Chinchilla_lanigera
ENSPTRG00000001370	RAB13	100	100.000	ENSCANG00000036573	-	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000001370	RAB13	100	95.567	ENSCGRG00001021505	Rab13	100	95.567	Cricetulus_griseus_chok1gshd
ENSPTRG00000001370	RAB13	100	95.567	ENSCGRG00000012126	Rab13	100	95.567	Cricetulus_griseus_crigri
ENSPTRG00000001370	RAB13	99	75.980	ENSCSEG00000002358	rab13	99	75.980	Cynoglossus_semilaevis
ENSPTRG00000001370	RAB13	99	78.218	ENSDARG00000034771	rab13	99	78.218	Danio_rerio
ENSPTRG00000001370	RAB13	100	94.581	ENSDORG00000001591	Rab13	100	94.581	Dipodomys_ordii
ENSPTRG00000001370	RAB13	100	98.522	ENSEASG00005000683	-	100	98.522	Equus_asinus_asinus
ENSPTRG00000001370	RAB13	100	98.522	ENSECAG00000016551	RAB13	100	98.522	Equus_caballus
ENSPTRG00000001370	RAB13	99	90.099	ENSEEUG00000001233	-	99	90.099	Erinaceus_europaeus
ENSPTRG00000001370	RAB13	99	76.733	ENSELUG00000012801	rab13	99	76.733	Esox_lucius
ENSPTRG00000001370	RAB13	100	92.118	ENSFCAG00000045269	-	100	92.118	Felis_catus
ENSPTRG00000001370	RAB13	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSPTRG00000001370	RAB13	99	75.743	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSPTRG00000001370	RAB13	99	75.248	ENSGACG00000011925	rab13	99	75.248	Gasterosteus_aculeatus
ENSPTRG00000001370	RAB13	85	90.751	ENSGAGG00000000742	-	99	81.281	Gopherus_agassizii
ENSPTRG00000001370	RAB13	100	100.000	ENSGGOG00000023693	RAB13	100	100.000	Gorilla_gorilla
ENSPTRG00000001370	RAB13	100	90.148	ENSHGLG00000008749	RAB13	100	90.148	Heterocephalus_glaber_female
ENSPTRG00000001370	RAB13	100	90.148	ENSHGLG00100013608	RAB13	100	90.148	Heterocephalus_glaber_male
ENSPTRG00000001370	RAB13	99	73.762	ENSHCOG00000007440	rab13	95	86.127	Hippocampus_comes
ENSPTRG00000001370	RAB13	99	77.000	ENSIPUG00000003199	rab13	99	77.000	Ictalurus_punctatus
ENSPTRG00000001370	RAB13	100	97.044	ENSSTOG00000011222	-	100	97.044	Ictidomys_tridecemlineatus
ENSPTRG00000001370	RAB13	100	92.118	ENSJJAG00000010575	Rab13	100	92.118	Jaculus_jaculus
ENSPTRG00000001370	RAB13	99	75.500	ENSKMAG00000001908	rab13	99	75.500	Kryptolebias_marmoratus
ENSPTRG00000001370	RAB13	99	77.000	ENSLBEG00000026779	rab13	99	77.000	Labrus_bergylta
ENSPTRG00000001370	RAB13	85	77.907	ENSLACG00000008103	-	97	77.907	Latimeria_chalumnae
ENSPTRG00000001370	RAB13	100	100.000	ENSMFAG00000041018	RAB13	100	100.000	Macaca_fascicularis
ENSPTRG00000001370	RAB13	100	100.000	ENSMNEG00000028951	-	100	100.000	Macaca_nemestrina
ENSPTRG00000001370	RAB13	100	100.000	ENSMLEG00000042247	-	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000001370	RAB13	99	75.248	ENSMAMG00000014602	rab13	99	75.248	Mastacembelus_armatus
ENSPTRG00000001370	RAB13	100	94.581	ENSMAUG00000015713	Rab13	100	94.581	Mesocricetus_auratus
ENSPTRG00000001370	RAB13	100	97.044	ENSMICG00000010340	-	100	97.044	Microcebus_murinus
ENSPTRG00000001370	RAB13	100	95.567	ENSMOCG00000021448	Rab13	100	95.567	Microtus_ochrogaster
ENSPTRG00000001370	RAB13	99	92.574	ENSMODG00000017295	-	84	92.574	Monodelphis_domestica
ENSPTRG00000001370	RAB13	100	92.611	MGP_CAROLIEiJ_G0025227	Rab13	100	92.611	Mus_caroli
ENSPTRG00000001370	RAB13	100	91.626	ENSMUSG00000027935	Rab13	100	91.626	Mus_musculus
ENSPTRG00000001370	RAB13	99	92.079	MGP_PahariEiJ_G0026671	Rab13	99	92.079	Mus_pahari
ENSPTRG00000001370	RAB13	100	95.567	ENSNGAG00000010309	Rab13	100	95.567	Nannospalax_galili
ENSPTRG00000001370	RAB13	99	75.248	ENSNBRG00000004124	rab13	99	75.248	Neolamprologus_brichardi
ENSPTRG00000001370	RAB13	100	100.000	ENSNLEG00000028944	-	100	100.000	Nomascus_leucogenys
ENSPTRG00000001370	RAB13	100	92.157	ENSMEUG00000009667	-	100	92.157	Notamacropus_eugenii
ENSPTRG00000001370	RAB13	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSPTRG00000001370	RAB13	100	89.655	ENSODEG00000010443	-	100	89.655	Octodon_degus
ENSPTRG00000001370	RAB13	99	75.743	ENSONIG00000006340	rab13	99	75.743	Oreochromis_niloticus
ENSPTRG00000001370	RAB13	88	96.067	ENSOCUG00000006286	-	100	96.067	Oryctolagus_cuniculus
ENSPTRG00000001370	RAB13	99	76.238	ENSOMEG00000008210	rab13	99	76.238	Oryzias_melastigma
ENSPTRG00000001370	RAB13	99	94.059	ENSOGAG00000016969	-	99	94.059	Otolemur_garnettii
ENSPTRG00000001370	RAB13	100	100.000	ENSPPAG00000028435	-	100	100.000	Pan_paniscus
ENSPTRG00000001370	RAB13	100	92.118	ENSPPRG00000008865	-	100	92.118	Panthera_pardus
ENSPTRG00000001370	RAB13	100	100.000	ENSPANG00000004479	-	100	100.000	Papio_anubis
ENSPTRG00000001370	RAB13	99	75.743	ENSPMGG00000007680	rab13	99	75.743	Periophthalmus_magnuspinnatus
ENSPTRG00000001370	RAB13	53	97.222	ENSPEMG00000017353	-	81	97.222	Peromyscus_maniculatus_bairdii
ENSPTRG00000001370	RAB13	100	92.647	ENSPCIG00000029350	-	100	92.647	Phascolarctos_cinereus
ENSPTRG00000001370	RAB13	95	74.112	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSPTRG00000001370	RAB13	90	80.328	ENSPREG00000017567	rab13	99	74.257	Poecilia_reticulata
ENSPTRG00000001370	RAB13	100	100.000	ENSPPYG00000000790	-	100	100.000	Pongo_abelii
ENSPTRG00000001370	RAB13	100	98.030	ENSPCOG00000012189	-	100	98.030	Propithecus_coquereli
ENSPTRG00000001370	RAB13	100	95.074	ENSPVAG00000011095	-	100	95.074	Pteropus_vampyrus
ENSPTRG00000001370	RAB13	85	86.127	ENSPNAG00000004189	rab13	92	86.127	Pygocentrus_nattereri
ENSPTRG00000001370	RAB13	100	92.611	ENSRNOG00000016733	Rab13	100	92.611	Rattus_norvegicus
ENSPTRG00000001370	RAB13	100	99.507	ENSRBIG00000008552	-	100	99.507	Rhinopithecus_bieti
ENSPTRG00000001370	RAB13	100	99.507	ENSRROG00000036885	-	100	99.507	Rhinopithecus_roxellana
ENSPTRG00000001370	RAB13	100	99.015	ENSSBOG00000020342	-	100	99.015	Saimiri_boliviensis_boliviensis
ENSPTRG00000001370	RAB13	100	91.667	ENSSHAG00000011866	-	100	91.667	Sarcophilus_harrisii
ENSPTRG00000001370	RAB13	100	98.522	ENSSSCG00000006564	-	100	98.522	Sus_scrofa
ENSPTRG00000001370	RAB13	99	76.733	ENSTRUG00000024177	rab13	99	76.733	Takifugu_rubripes
ENSPTRG00000001370	RAB13	100	97.044	ENSTBEG00000012734	-	100	97.044	Tupaia_belangeri
ENSPTRG00000001370	RAB13	100	99.507	ENSTTRG00000011183	-	100	99.507	Tursiops_truncatus
ENSPTRG00000001370	RAB13	71	81.944	ENSXETG00000020729	rab13	99	78.882	Xenopus_tropicalis
ENSPTRG00000001370	RAB13	85	82.659	ENSXCOG00000019533	rab13	93	82.659	Xiphophorus_couchianus