EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000001702 (Gene tree)
Gene ID: 457530
Gene Symbol: RC3H1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 82865 bases
Position: chr1:152345643-152428507
Accession: 6975
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000002831	zf-CCCH	PF00642.24	0.00036	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000003080	-	3636	XM_001151649	ENSPTRP00000002831	1134 (aa)	XP_001151649	H2Q0N1

Gene Model

Click here to download ENSPTRG00000001702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000001702's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000001702	RC3H1	96	52.348	ENSPTRG00000021339	RC3H2	94	83.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000001702	RC3H1	100	99.824	ENSG00000135870	RC3H1	100	99.824	Homo_sapiens
ENSPTRG00000001702	RC3H1	100	96.914	ENSAMEG00000015657	RC3H1	100	96.914	Ailuropoda_melanoleuca
ENSPTRG00000001702	RC3H1	100	88.230	ENSAPLG00000005341	RC3H1	100	88.230	Anas_platyrhynchos
ENSPTRG00000001702	RC3H1	100	85.428	ENSACAG00000015271	RC3H1	100	85.428	Anolis_carolinensis
ENSPTRG00000001702	RC3H1	100	98.942	ENSANAG00000036716	RC3H1	100	98.942	Aotus_nancymaae
ENSPTRG00000001702	RC3H1	100	95.855	ENSBTAG00000052708	RC3H1	100	95.855	Bos_taurus
ENSPTRG00000001702	RC3H1	100	98.589	ENSCJAG00000009106	RC3H1	100	98.589	Callithrix_jacchus
ENSPTRG00000001702	RC3H1	100	97.002	ENSCAFG00000014434	RC3H1	100	97.002	Canis_familiaris
ENSPTRG00000001702	RC3H1	100	96.916	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSPTRG00000001702	RC3H1	100	96.208	ENSCHIG00000002873	RC3H1	100	96.208	Capra_hircus
ENSPTRG00000001702	RC3H1	99	95.150	ENSTSYG00000003913	RC3H1	99	95.326	Carlito_syrichta
ENSPTRG00000001702	RC3H1	100	91.366	ENSCPOG00000004349	RC3H1	100	91.278	Cavia_porcellus
ENSPTRG00000001702	RC3H1	100	96.561	ENSCCAG00000025652	RC3H1	100	96.561	Cebus_capucinus
ENSPTRG00000001702	RC3H1	100	99.383	ENSCATG00000033497	RC3H1	100	99.383	Cercocebus_atys
ENSPTRG00000001702	RC3H1	100	94.978	ENSCLAG00000011267	RC3H1	100	94.978	Chinchilla_lanigera
ENSPTRG00000001702	RC3H1	96	99.354	ENSCSAG00000011823	RC3H1	84	99.354	Chlorocebus_sabaeus
ENSPTRG00000001702	RC3H1	100	89.746	ENSCPBG00000014670	RC3H1	100	96.304	Chrysemys_picta_bellii
ENSPTRG00000001702	RC3H1	100	99.471	ENSCANG00000032120	RC3H1	100	99.471	Colobus_angolensis_palliatus
ENSPTRG00000001702	RC3H1	100	94.268	ENSCGRG00001020812	Rc3h1	100	93.827	Cricetulus_griseus_chok1gshd
ENSPTRG00000001702	RC3H1	100	94.268	ENSCGRG00000011952	Rc3h1	100	93.827	Cricetulus_griseus_crigri
ENSPTRG00000001702	RC3H1	55	95.338	ENSDNOG00000011494	RC3H1	99	95.338	Dasypus_novemcinctus
ENSPTRG00000001702	RC3H1	100	96.032	ENSDORG00000004855	Rc3h1	100	96.032	Dipodomys_ordii
ENSPTRG00000001702	RC3H1	81	96.647	ENSETEG00000012064	RC3H1	87	96.647	Echinops_telfairi
ENSPTRG00000001702	RC3H1	100	95.944	ENSEASG00005017000	RC3H1	100	95.944	Equus_asinus_asinus
ENSPTRG00000001702	RC3H1	100	95.767	ENSECAG00000021208	RC3H1	100	95.767	Equus_caballus
ENSPTRG00000001702	RC3H1	83	97.059	ENSEEUG00000014861	RC3H1	93	83.302	Erinaceus_europaeus
ENSPTRG00000001702	RC3H1	100	97.354	ENSFCAG00000014924	RC3H1	100	97.354	Felis_catus
ENSPTRG00000001702	RC3H1	100	87.598	ENSFALG00000002947	RC3H1	100	87.074	Ficedula_albicollis
ENSPTRG00000001702	RC3H1	100	94.978	ENSFDAG00000013303	RC3H1	100	94.978	Fukomys_damarensis
ENSPTRG00000001702	RC3H1	100	87.292	ENSGALG00000004587	RC3H1	100	87.292	Gallus_gallus
ENSPTRG00000001702	RC3H1	100	88.091	ENSGAGG00000018194	RC3H1	100	88.354	Gopherus_agassizii
ENSPTRG00000001702	RC3H1	100	92.970	ENSGGOG00000005735	RC3H1	100	92.970	Gorilla_gorilla
ENSPTRG00000001702	RC3H1	88	88.506	ENSHGLG00000004183	-	99	88.506	Heterocephalus_glaber_female
ENSPTRG00000001702	RC3H1	100	94.449	ENSHGLG00100008577	RC3H1	100	94.449	Heterocephalus_glaber_male
ENSPTRG00000001702	RC3H1	100	96.652	ENSSTOG00000016033	RC3H1	100	96.652	Ictidomys_tridecemlineatus
ENSPTRG00000001702	RC3H1	100	95.326	ENSJJAG00000018915	Rc3h1	100	95.150	Jaculus_jaculus
ENSPTRG00000001702	RC3H1	100	75.152	ENSLACG00000016186	RC3H1	100	78.279	Latimeria_chalumnae
ENSPTRG00000001702	RC3H1	97	97.543	ENSLAFG00000004367	RC3H1	100	97.543	Loxodonta_africana
ENSPTRG00000001702	RC3H1	100	99.206	ENSMFAG00000033725	RC3H1	100	99.206	Macaca_fascicularis
ENSPTRG00000001702	RC3H1	100	99.118	ENSMMUG00000000630	RC3H1	100	99.118	Macaca_mulatta
ENSPTRG00000001702	RC3H1	100	99.295	ENSMNEG00000035968	RC3H1	100	99.295	Macaca_nemestrina
ENSPTRG00000001702	RC3H1	100	99.206	ENSMLEG00000037455	RC3H1	100	99.206	Mandrillus_leucophaeus
ENSPTRG00000001702	RC3H1	97	94.355	ENSMAUG00000020864	Rc3h1	100	93.851	Mesocricetus_auratus
ENSPTRG00000001702	RC3H1	100	97.443	ENSMICG00000003000	RC3H1	100	97.443	Microcebus_murinus
ENSPTRG00000001702	RC3H1	93	92.904	ENSMOCG00000016587	Rc3h1	98	92.526	Microtus_ochrogaster
ENSPTRG00000001702	RC3H1	100	92.247	ENSMODG00000004289	RC3H1	100	92.335	Monodelphis_domestica
ENSPTRG00000001702	RC3H1	100	93.827	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.386	Mus_caroli
ENSPTRG00000001702	RC3H1	100	93.651	ENSMUSG00000040423	Rc3h1	100	93.210	Mus_musculus
ENSPTRG00000001702	RC3H1	100	93.474	MGP_PahariEiJ_G0027992	Rc3h1	100	93.034	Mus_pahari
ENSPTRG00000001702	RC3H1	100	93.474	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.034	Mus_spretus
ENSPTRG00000001702	RC3H1	100	96.652	ENSMPUG00000004747	RC3H1	100	96.652	Mustela_putorius_furo
ENSPTRG00000001702	RC3H1	100	95.591	ENSMLUG00000011127	RC3H1	100	95.591	Myotis_lucifugus
ENSPTRG00000001702	RC3H1	100	95.855	ENSNGAG00000011135	Rc3h1	100	95.414	Nannospalax_galili
ENSPTRG00000001702	RC3H1	100	99.383	ENSNLEG00000015327	RC3H1	100	99.383	Nomascus_leucogenys
ENSPTRG00000001702	RC3H1	99	82.951	ENSOPRG00000013068	RC3H1	99	83.039	Ochotona_princeps
ENSPTRG00000001702	RC3H1	100	94.537	ENSODEG00000014185	RC3H1	100	94.537	Octodon_degus
ENSPTRG00000001702	RC3H1	100	91.616	ENSOANG00000000924	RC3H1	100	91.528	Ornithorhynchus_anatinus
ENSPTRG00000001702	RC3H1	99	96.154	ENSOCUG00000004930	RC3H1	98	96.154	Oryctolagus_cuniculus
ENSPTRG00000001702	RC3H1	100	90.229	ENSOGAG00000004044	RC3H1	100	90.229	Otolemur_garnettii
ENSPTRG00000001702	RC3H1	100	96.667	ENSOARG00000013011	RC3H1	100	96.667	Ovis_aries
ENSPTRG00000001702	RC3H1	100	100.000	ENSPPAG00000039253	RC3H1	100	100.000	Pan_paniscus
ENSPTRG00000001702	RC3H1	100	96.649	ENSPPRG00000009007	RC3H1	100	96.649	Panthera_pardus
ENSPTRG00000001702	RC3H1	100	97.015	ENSPTIG00000015326	RC3H1	100	97.015	Panthera_tigris_altaica
ENSPTRG00000001702	RC3H1	100	99.206	ENSPANG00000008886	RC3H1	100	99.206	Papio_anubis
ENSPTRG00000001702	RC3H1	100	88.879	ENSPSIG00000016181	RC3H1	100	89.142	Pelodiscus_sinensis
ENSPTRG00000001702	RC3H1	100	93.827	ENSPEMG00000011966	Rc3h1	100	93.474	Peromyscus_maniculatus_bairdii
ENSPTRG00000001702	RC3H1	70	94.177	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSPTRG00000001702	RC3H1	100	96.032	ENSPPYG00000000490	RC3H1	98	98.660	Pongo_abelii
ENSPTRG00000001702	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSPTRG00000001702	RC3H1	83	96.905	ENSPCOG00000021795	RC3H1	96	96.905	Propithecus_coquereli
ENSPTRG00000001702	RC3H1	100	88.183	ENSPVAG00000007593	RC3H1	100	88.183	Pteropus_vampyrus
ENSPTRG00000001702	RC3H1	97	61.749	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSPTRG00000001702	RC3H1	100	99.383	ENSRBIG00000037743	RC3H1	100	99.383	Rhinopithecus_bieti
ENSPTRG00000001702	RC3H1	100	99.118	ENSRROG00000036546	RC3H1	100	99.118	Rhinopithecus_roxellana
ENSPTRG00000001702	RC3H1	93	89.215	ENSSBOG00000010664	RC3H1	100	92.526	Saimiri_boliviensis_boliviensis
ENSPTRG00000001702	RC3H1	100	91.454	ENSSHAG00000007589	RC3H1	100	91.542	Sarcophilus_harrisii
ENSPTRG00000001702	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSPTRG00000001702	RC3H1	100	84.514	ENSSPUG00000018472	RC3H1	100	83.975	Sphenodon_punctatus
ENSPTRG00000001702	RC3H1	100	97.531	ENSSSCG00000015498	RC3H1	100	97.531	Sus_scrofa
ENSPTRG00000001702	RC3H1	100	87.905	ENSTGUG00000004090	RC3H1	100	87.905	Taeniopygia_guttata
ENSPTRG00000001702	RC3H1	89	97.561	ENSTBEG00000005015	RC3H1	89	97.561	Tupaia_belangeri
ENSPTRG00000001702	RC3H1	100	96.567	ENSTTRG00000008572	RC3H1	100	96.567	Tursiops_truncatus
ENSPTRG00000001702	RC3H1	100	96.296	ENSUAMG00000019525	RC3H1	100	96.296	Ursus_americanus
ENSPTRG00000001702	RC3H1	100	97.002	ENSUMAG00000020087	RC3H1	100	97.002	Ursus_maritimus
ENSPTRG00000001702	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSPTRG00000001702	RC3H1	100	96.661	ENSVVUG00000014201	RC3H1	100	96.661	Vulpes_vulpes
ENSPTRG00000001702	RC3H1	100	79.373	ENSXETG00000020030	rc3h1	100	78.920	Xenopus_tropicalis