EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000001764 (Gene tree)
Gene ID: 457572
Gene Symbol: SMG7
Alias: -
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 81845 bases
Position: chr1:162089096-162170940
Accession: 1556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000067318	EST1	PF10374.9	1.2e-24	1	1
ENSPTRP00000002946	EST1	PF10374.9	1.2e-24	1	1
ENSPTRP00000086458	EST1	PF10374.9	1.3e-24	1	1
ENSPTRP00000085516	EST1	PF10374.9	3.3e-22	1	1
ENSPTRP00000067318	EST1_DNA_bind	PF10373.9	3.3e-55	1	1
ENSPTRP00000002946	EST1_DNA_bind	PF10373.9	3.3e-55	1	1
ENSPTRP00000086458	EST1_DNA_bind	PF10373.9	3.5e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000104567	-	219	-	ENSPTRP00000063701	73 (aa)	-	A0A2J8N6H5
ENSPTRT00000078819	-	555	-	ENSPTRP00000085516	184 (aa)	-	A0A2I3T8E4
ENSPTRT00000098811	-	3414	XM_016933892	ENSPTRP00000067318	1137 (aa)	XP_016789381	K7AGF7
ENSPTRT00000003202	-	6680	XM_016933881	ENSPTRP00000002946	1145 (aa)	XP_016789370	H2Q0R5
ENSPTRT00000077071	-	3537	-	ENSPTRP00000086458	1178 (aa)	-	A0A2I3TB56

Gene Model

Click here to download ENSPTRG00000001764's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000001764's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000001764	SMG7	100	99.825	ENSG00000116698	SMG7	100	99.825	Homo_sapiens
ENSPTRG00000001764	SMG7	86	93.038	ENSAPOG00000009611	smg7	95	74.735	Acanthochromis_polyacanthus
ENSPTRG00000001764	SMG7	100	97.031	ENSAMEG00000002357	SMG7	100	97.031	Ailuropoda_melanoleuca
ENSPTRG00000001764	SMG7	70	94.574	ENSACIG00000015152	smg7	100	65.062	Amphilophus_citrinellus
ENSPTRG00000001764	SMG7	85	92.994	ENSAOCG00000013538	smg7	99	67.009	Amphiprion_ocellaris
ENSPTRG00000001764	SMG7	84	94.194	ENSAPEG00000007851	smg7	99	66.866	Amphiprion_percula
ENSPTRG00000001764	SMG7	86	93.082	ENSATEG00000006931	smg7	99	66.384	Anabas_testudineus
ENSPTRG00000001764	SMG7	100	89.151	ENSAPLG00000015811	SMG7	100	88.976	Anas_platyrhynchos
ENSPTRG00000001764	SMG7	100	87.706	ENSACAG00000014989	SMG7	96	88.225	Anolis_carolinensis
ENSPTRG00000001764	SMG7	100	98.777	ENSANAG00000028114	SMG7	100	98.769	Aotus_nancymaae
ENSPTRG00000001764	SMG7	85	94.231	ENSACLG00000022079	smg7	99	66.495	Astatotilapia_calliptera
ENSPTRG00000001764	SMG7	84	94.194	ENSAMXG00000020809	smg7	99	68.202	Astyanax_mexicanus
ENSPTRG00000001764	SMG7	100	96.306	ENSBTAG00000008003	SMG7	100	96.306	Bos_taurus
ENSPTRG00000001764	SMG7	100	98.515	ENSCJAG00000005135	SMG7	100	98.505	Callithrix_jacchus
ENSPTRG00000001764	SMG7	100	93.537	ENSCAFG00000013276	SMG7	94	97.354	Canis_familiaris
ENSPTRG00000001764	SMG7	100	97.293	ENSCAFG00020015475	SMG7	98	98.333	Canis_lupus_dingo
ENSPTRG00000001764	SMG7	100	92.664	ENSCHIG00000018192	SMG7	96	96.445	Capra_hircus
ENSPTRG00000001764	SMG7	100	97.625	ENSTSYG00000002667	SMG7	100	97.625	Carlito_syrichta
ENSPTRG00000001764	SMG7	100	93.712	ENSCPOG00000008906	SMG7	96	96.715	Cavia_porcellus
ENSPTRG00000001764	SMG7	100	98.865	ENSCCAG00000028596	SMG7	100	98.865	Cebus_capucinus
ENSPTRG00000001764	SMG7	100	99.651	ENSCATG00000011063	SMG7	100	99.651	Cercocebus_atys
ENSPTRG00000001764	SMG7	100	96.834	ENSCLAG00000010751	SMG7	100	96.834	Chinchilla_lanigera
ENSPTRG00000001764	SMG7	100	95.459	ENSCSAG00000012654	SMG7	94	99.361	Chlorocebus_sabaeus
ENSPTRG00000001764	SMG7	95	88.362	ENSCHOG00000010522	SMG7	99	88.720	Choloepus_hoffmanni
ENSPTRG00000001764	SMG7	100	92.080	ENSCPBG00000015724	SMG7	100	91.674	Chrysemys_picta_bellii
ENSPTRG00000001764	SMG7	85	51.829	ENSCING00000006953	-	94	53.746	Ciona_intestinalis
ENSPTRG00000001764	SMG7	100	99.563	ENSCANG00000015680	SMG7	100	99.563	Colobus_angolensis_palliatus
ENSPTRG00000001764	SMG7	100	95.251	ENSCGRG00001013705	Smg7	100	95.251	Cricetulus_griseus_chok1gshd
ENSPTRG00000001764	SMG7	99	95.209	ENSCGRG00000018401	Smg7	100	95.209	Cricetulus_griseus_crigri
ENSPTRG00000001764	SMG7	85	89.172	ENSCSEG00000007392	-	89	89.172	Cynoglossus_semilaevis
ENSPTRG00000001764	SMG7	80	88.000	ENSCVAG00000011842	smg7	98	69.500	Cyprinodon_variegatus
ENSPTRG00000001764	SMG7	84	94.839	ENSDARG00000060767	smg7	99	67.934	Danio_rerio
ENSPTRG00000001764	SMG7	100	92.751	ENSDORG00000007331	Smg7	97	96.649	Dipodomys_ordii
ENSPTRG00000001764	SMG7	94	96.377	ENSETEG00000002654	SMG7	100	96.377	Echinops_telfairi
ENSPTRG00000001764	SMG7	100	93.974	ENSEASG00005006524	SMG7	97	97.917	Equus_asinus_asinus
ENSPTRG00000001764	SMG7	100	94.061	ENSECAG00000004313	SMG7	97	98.007	Equus_caballus
ENSPTRG00000001764	SMG7	99	93.963	ENSEEUG00000002024	SMG7	99	93.963	Erinaceus_europaeus
ENSPTRG00000001764	SMG7	85	94.268	ENSELUG00000010293	smg7	99	66.048	Esox_lucius
ENSPTRG00000001764	SMG7	99	95.474	ENSFCAG00000010900	SMG7	97	97.814	Felis_catus
ENSPTRG00000001764	SMG7	100	86.285	ENSFALG00000003047	SMG7	98	86.198	Ficedula_albicollis
ENSPTRG00000001764	SMG7	100	93.450	ENSFDAG00000012121	SMG7	96	97.235	Fukomys_damarensis
ENSPTRG00000001764	SMG7	85	89.809	ENSFHEG00000011073	smg7	99	64.055	Fundulus_heteroclitus
ENSPTRG00000001764	SMG7	85	90.446	ENSGMOG00000004916	smg7	92	67.737	Gadus_morhua
ENSPTRG00000001764	SMG7	100	89.510	ENSGALG00000004667	SMG7	100	89.336	Gallus_gallus
ENSPTRG00000001764	SMG7	95	85.475	ENSGAFG00000019000	smg7	99	64.569	Gambusia_affinis
ENSPTRG00000001764	SMG7	85	91.720	ENSGACG00000001634	smg7	99	65.053	Gasterosteus_aculeatus
ENSPTRG00000001764	SMG7	99	86.813	ENSGAGG00000024208	-	94	86.813	Gopherus_agassizii
ENSPTRG00000001764	SMG7	100	99.738	ENSGGOG00000002342	SMG7	100	99.738	Gorilla_gorilla
ENSPTRG00000001764	SMG7	86	93.038	ENSHBUG00000003726	smg7	94	72.589	Haplochromis_burtoni
ENSPTRG00000001764	SMG7	100	97.361	ENSHGLG00000009353	SMG7	100	97.361	Heterocephalus_glaber_female
ENSPTRG00000001764	SMG7	94	89.312	ENSHGLG00100004878	-	97	89.312	Heterocephalus_glaber_male
ENSPTRG00000001764	SMG7	100	97.449	ENSHGLG00100009637	-	100	97.449	Heterocephalus_glaber_male
ENSPTRG00000001764	SMG7	92	80.702	ENSHCOG00000012804	-	91	81.871	Hippocampus_comes
ENSPTRG00000001764	SMG7	84	94.194	ENSIPUG00000016997	smg7	99	68.674	Ictalurus_punctatus
ENSPTRG00000001764	SMG7	100	94.148	ENSSTOG00000000401	SMG7	97	98.098	Ictidomys_tridecemlineatus
ENSPTRG00000001764	SMG7	96	85.311	ENSJJAG00000000309	-	100	85.311	Jaculus_jaculus
ENSPTRG00000001764	SMG7	100	91.790	ENSJJAG00000012351	Smg7	97	95.743	Jaculus_jaculus
ENSPTRG00000001764	SMG7	72	93.182	ENSKMAG00000004900	smg7	96	70.500	Kryptolebias_marmoratus
ENSPTRG00000001764	SMG7	86	91.195	ENSLBEG00000002983	smg7	99	66.523	Labrus_bergylta
ENSPTRG00000001764	SMG7	52	63.000	ENSLBEG00000005220	-	75	64.623	Labrus_bergylta
ENSPTRG00000001764	SMG7	90	92.121	ENSLACG00000000972	SMG7	99	75.608	Latimeria_chalumnae
ENSPTRG00000001764	SMG7	86	94.340	ENSLOCG00000002010	smg7	99	66.998	Lepisosteus_oculatus
ENSPTRG00000001764	SMG7	100	93.624	ENSLAFG00000008186	SMG7	96	97.534	Loxodonta_africana
ENSPTRG00000001764	SMG7	100	99.563	ENSMFAG00000031653	SMG7	100	99.563	Macaca_fascicularis
ENSPTRG00000001764	SMG7	100	99.651	ENSMMUG00000018458	SMG7	100	99.066	Macaca_mulatta
ENSPTRG00000001764	SMG7	100	99.651	ENSMNEG00000034798	SMG7	100	99.651	Macaca_nemestrina
ENSPTRG00000001764	SMG7	100	99.651	ENSMLEG00000037170	SMG7	100	99.651	Mandrillus_leucophaeus
ENSPTRG00000001764	SMG7	85	92.357	ENSMAMG00000018733	smg7	85	65.571	Mastacembelus_armatus
ENSPTRG00000001764	SMG7	85	94.231	ENSMZEG00005015247	smg7	99	66.068	Maylandia_zebra
ENSPTRG00000001764	SMG7	97	89.398	ENSMGAG00000001561	SMG7	98	89.218	Meleagris_gallopavo
ENSPTRG00000001764	SMG7	100	95.515	ENSMAUG00000019484	Smg7	100	95.515	Mesocricetus_auratus
ENSPTRG00000001764	SMG7	100	98.593	ENSMICG00000007145	SMG7	100	98.593	Microcebus_murinus
ENSPTRG00000001764	SMG7	100	95.515	ENSMOCG00000020748	Smg7	100	95.515	Microtus_ochrogaster
ENSPTRG00000001764	SMG7	88	89.441	ENSMMOG00000001524	smg7	99	64.589	Mola_mola
ENSPTRG00000001764	SMG7	92	93.359	ENSMODG00000007139	SMG7	99	93.359	Monodelphis_domestica
ENSPTRG00000001764	SMG7	85	92.994	ENSMALG00000000061	smg7	93	66.352	Monopterus_albus
ENSPTRG00000001764	SMG7	100	95.163	MGP_CAROLIEiJ_G0014704	Smg7	100	94.811	Mus_caroli
ENSPTRG00000001764	SMG7	100	95.075	ENSMUSG00000042772	Smg7	100	95.075	Mus_musculus
ENSPTRG00000001764	SMG7	100	95.251	MGP_PahariEiJ_G0027940	Smg7	100	95.251	Mus_pahari
ENSPTRG00000001764	SMG7	100	95.163	MGP_SPRETEiJ_G0015511	Smg7	100	95.163	Mus_spretus
ENSPTRG00000001764	SMG7	100	93.537	ENSMPUG00000011732	SMG7	94	97.327	Mustela_putorius_furo
ENSPTRG00000001764	SMG7	100	92.926	ENSMLUG00000015417	SMG7	96	96.715	Myotis_lucifugus
ENSPTRG00000001764	SMG7	100	96.394	ENSNGAG00000009836	Smg7	100	96.394	Nannospalax_galili
ENSPTRG00000001764	SMG7	98	61.478	ENSNBRG00000024343	smg7	96	70.476	Neolamprologus_brichardi
ENSPTRG00000001764	SMG7	100	99.825	ENSNLEG00000018018	SMG7	100	99.825	Nomascus_leucogenys
ENSPTRG00000001764	SMG7	81	86.704	ENSMEUG00000004681	SMG7	82	86.890	Notamacropus_eugenii
ENSPTRG00000001764	SMG7	85	96.178	ENSOPRG00000013942	SMG7	99	80.700	Ochotona_princeps
ENSPTRG00000001764	SMG7	100	97.361	ENSODEG00000010390	SMG7	100	97.361	Octodon_degus
ENSPTRG00000001764	SMG7	84	94.194	ENSONIG00000000277	smg7	99	66.096	Oreochromis_niloticus
ENSPTRG00000001764	SMG7	100	87.391	ENSOANG00000000994	SMG7	97	91.384	Ornithorhynchus_anatinus
ENSPTRG00000001764	SMG7	100	86.288	ENSOCUG00000005887	SMG7	89	90.876	Oryctolagus_cuniculus
ENSPTRG00000001764	SMG7	97	83.240	ENSORLG00000007314	smg7	81	83.240	Oryzias_latipes
ENSPTRG00000001764	SMG7	85	91.083	ENSORLG00020015779	smg7	82	82.418	Oryzias_latipes_hni
ENSPTRG00000001764	SMG7	89	87.805	ENSORLG00015012289	smg7	99	63.801	Oryzias_latipes_hsok
ENSPTRG00000001764	SMG7	85	91.083	ENSOMEG00000002328	smg7	99	62.331	Oryzias_melastigma
ENSPTRG00000001764	SMG7	99	95.072	ENSOGAG00000003107	SMG7	100	94.987	Otolemur_garnettii
ENSPTRG00000001764	SMG7	100	92.402	ENSOARG00000001352	SMG7	100	92.315	Ovis_aries
ENSPTRG00000001764	SMG7	100	100.000	ENSPPAG00000031619	SMG7	100	100.000	Pan_paniscus
ENSPTRG00000001764	SMG7	100	97.977	ENSPPRG00000011222	SMG7	100	97.977	Panthera_pardus
ENSPTRG00000001764	SMG7	100	97.904	ENSPTIG00000007242	SMG7	100	97.904	Panthera_tigris_altaica
ENSPTRG00000001764	SMG7	100	99.648	ENSPANG00000004520	SMG7	100	99.648	Papio_anubis
ENSPTRG00000001764	SMG7	89	89.024	ENSPKIG00000007242	smg7	99	65.993	Paramormyrops_kingsleyae
ENSPTRG00000001764	SMG7	98	90.804	ENSPSIG00000012201	SMG7	100	90.536	Pelodiscus_sinensis
ENSPTRG00000001764	SMG7	59	57.000	ENSPMGG00000021833	smg7	79	70.796	Periophthalmus_magnuspinnatus
ENSPTRG00000001764	SMG7	86	86.076	ENSPMGG00000002179	-	90	83.951	Periophthalmus_magnuspinnatus
ENSPTRG00000001764	SMG7	100	91.441	ENSPEMG00000011315	Smg7	97	95.290	Peromyscus_maniculatus_bairdii
ENSPTRG00000001764	SMG7	100	93.717	ENSPCIG00000003786	SMG7	100	93.497	Phascolarctos_cinereus
ENSPTRG00000001764	SMG7	85	90.446	ENSPFOG00000019219	smg7	99	61.932	Poecilia_formosa
ENSPTRG00000001764	SMG7	85	90.446	ENSPLAG00000001446	smg7	99	64.686	Poecilia_latipinna
ENSPTRG00000001764	SMG7	85	90.446	ENSPMEG00000005218	smg7	99	63.968	Poecilia_mexicana
ENSPTRG00000001764	SMG7	85	89.809	ENSPREG00000019039	smg7	91	61.858	Poecilia_reticulata
ENSPTRG00000001764	SMG7	100	99.912	ENSPPYG00000000427	SMG7	100	99.912	Pongo_abelii
ENSPTRG00000001764	SMG7	98	84.197	ENSPCAG00000008360	SMG7	100	84.197	Procavia_capensis
ENSPTRG00000001764	SMG7	100	97.623	ENSPCOG00000011996	SMG7	100	97.623	Propithecus_coquereli
ENSPTRG00000001764	SMG7	99	85.799	ENSPVAG00000000851	SMG7	100	85.799	Pteropus_vampyrus
ENSPTRG00000001764	SMG7	85	94.231	ENSPNYG00000007643	smg7	99	66.266	Pundamilia_nyererei
ENSPTRG00000001764	SMG7	88	92.593	ENSPNAG00000011374	smg7	99	68.398	Pygocentrus_nattereri
ENSPTRG00000001764	SMG7	100	95.288	ENSRNOG00000027962	Smg7	100	96.561	Rattus_norvegicus
ENSPTRG00000001764	SMG7	100	99.563	ENSRBIG00000036316	SMG7	100	99.563	Rhinopithecus_bieti
ENSPTRG00000001764	SMG7	100	99.563	ENSRROG00000035719	SMG7	100	99.563	Rhinopithecus_roxellana
ENSPTRG00000001764	SMG7	100	98.777	ENSSBOG00000023454	SMG7	100	98.777	Saimiri_boliviensis_boliviensis
ENSPTRG00000001764	SMG7	100	93.152	ENSSHAG00000013147	SMG7	100	92.888	Sarcophilus_harrisii
ENSPTRG00000001764	SMG7	84	92.903	ENSSFOG00015017252	smg7	96	76.842	Scleropages_formosus
ENSPTRG00000001764	SMG7	85	92.994	ENSSMAG00000006067	smg7	99	66.150	Scophthalmus_maximus
ENSPTRG00000001764	SMG7	86	93.038	ENSSDUG00000017543	smg7	99	66.019	Seriola_dumerili
ENSPTRG00000001764	SMG7	86	93.038	ENSSLDG00000003750	-	95	94.304	Seriola_lalandi_dorsalis
ENSPTRG00000001764	SMG7	99	90.548	ENSSPUG00000002064	SMG7	99	90.371	Sphenodon_punctatus
ENSPTRG00000001764	SMG7	77	94.326	ENSSPAG00000008733	smg7	100	66.064	Stegastes_partitus
ENSPTRG00000001764	SMG7	100	93.755	ENSSSCG00000015558	SMG7	97	97.645	Sus_scrofa
ENSPTRG00000001764	SMG7	99	89.427	ENSTGUG00000003928	SMG7	100	89.339	Taeniopygia_guttata
ENSPTRG00000001764	SMG7	95	82.857	ENSTRUG00000003612	-	95	82.857	Takifugu_rubripes
ENSPTRG00000001764	SMG7	84	89.103	ENSTNIG00000002802	smg7	96	63.304	Tetraodon_nigroviridis
ENSPTRG00000001764	SMG7	78	96.610	ENSTBEG00000003220	SMG7	81	93.991	Tupaia_belangeri
ENSPTRG00000001764	SMG7	99	96.243	ENSTTRG00000014778	SMG7	100	96.243	Tursiops_truncatus
ENSPTRG00000001764	SMG7	96	93.516	ENSUAMG00000017473	SMG7	100	93.516	Ursus_americanus
ENSPTRG00000001764	SMG7	100	93.624	ENSUMAG00000016389	SMG7	97	97.458	Ursus_maritimus
ENSPTRG00000001764	SMG7	100	93.668	ENSVVUG00000008976	SMG7	97	97.583	Vulpes_vulpes
ENSPTRG00000001764	SMG7	84	92.258	ENSXETG00000012528	smg7	100	71.032	Xenopus_tropicalis
ENSPTRG00000001764	SMG7	84	92.258	ENSXMAG00000007123	smg7	99	64.635	Xiphophorus_maculatus