EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000002124 (Gene tree)
Gene ID: 457830
Gene Symbol: TARBP1
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 91001 bases
Position: chr1:213447410-213538410
Accession: 457830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000003591	SpoU_methylase	PF00588.19	3.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000003885	TARBP1-201	5159	XM_009441676	ENSPTRP00000003591	1623 (aa)	XP_009439951	H2Q1D3

Gene Model

Click here to download ENSPTRG00000002124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000002124's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000002124	TARBP1	100	98.829	ENSG00000059588	TARBP1	100	98.829	Homo_sapiens
ENSPTRG00000002124	TARBP1	99	42.278	ENSAPOG00000016419	si:dkey-85a20.4	86	45.429	Acanthochromis_polyacanthus
ENSPTRG00000002124	TARBP1	84	85.464	ENSAMEG00000003359	TARBP1	100	85.464	Ailuropoda_melanoleuca
ENSPTRG00000002124	TARBP1	99	42.669	ENSATEG00000020266	si:dkey-85a20.4	88	45.219	Anabas_testudineus
ENSPTRG00000002124	TARBP1	84	67.589	ENSAPLG00000007666	TARBP1	99	68.493	Anas_platyrhynchos
ENSPTRG00000002124	TARBP1	99	58.748	ENSACAG00000001142	TARBP1	99	58.333	Anolis_carolinensis
ENSPTRG00000002124	TARBP1	99	84.294	ENSBTAG00000004517	TARBP1	99	84.663	Bos_taurus
ENSPTRG00000002124	TARBP1	100	94.147	ENSCJAG00000018155	TARBP1	100	94.208	Callithrix_jacchus
ENSPTRG00000002124	TARBP1	88	85.505	ENSCAFG00000011533	TARBP1	100	85.805	Canis_familiaris
ENSPTRG00000002124	TARBP1	99	84.479	ENSCAFG00020027141	TARBP1	99	85.153	Canis_lupus_dingo
ENSPTRG00000002124	TARBP1	99	83.149	ENSCHIG00000011437	TARBP1	99	83.948	Capra_hircus
ENSPTRG00000002124	TARBP1	81	88.397	ENSTSYG00000010382	TARBP1	97	88.092	Carlito_syrichta
ENSPTRG00000002124	TARBP1	79	69.279	ENSCAPG00000010831	TARBP1	99	69.279	Cavia_aperea
ENSPTRG00000002124	TARBP1	99	76.017	ENSCPOG00000013995	TARBP1	99	76.757	Cavia_porcellus
ENSPTRG00000002124	TARBP1	100	94.886	ENSCCAG00000037278	TARBP1	100	94.948	Cebus_capucinus
ENSPTRG00000002124	TARBP1	100	96.734	ENSCATG00000011754	TARBP1	100	96.734	Cercocebus_atys
ENSPTRG00000002124	TARBP1	83	80.000	ENSCLAG00000003655	TARBP1	99	80.000	Chinchilla_lanigera
ENSPTRG00000002124	TARBP1	79	97.123	ENSCSAG00000010100	TARBP1	100	97.123	Chlorocebus_sabaeus
ENSPTRG00000002124	TARBP1	95	66.474	ENSCPBG00000005587	TARBP1	99	68.553	Chrysemys_picta_bellii
ENSPTRG00000002124	TARBP1	84	97.206	ENSCANG00000034343	TARBP1	100	97.206	Colobus_angolensis_palliatus
ENSPTRG00000002124	TARBP1	99	74.907	ENSCGRG00001016690	Tarbp1	99	74.475	Cricetulus_griseus_chok1gshd
ENSPTRG00000002124	TARBP1	98	76.641	ENSCGRG00000016893	Tarbp1	99	77.181	Cricetulus_griseus_crigri
ENSPTRG00000002124	TARBP1	99	40.049	ENSCSEG00000005255	si:dkey-85a20.4	89	45.680	Cynoglossus_semilaevis
ENSPTRG00000002124	TARBP1	87	45.530	ENSDARG00000079055	si:dkey-85a20.4	99	54.325	Danio_rerio
ENSPTRG00000002124	TARBP1	99	83.534	ENSDNOG00000008637	TARBP1	99	83.534	Dasypus_novemcinctus
ENSPTRG00000002124	TARBP1	80	74.537	ENSDORG00000007984	Tarbp1	100	74.537	Dipodomys_ordii
ENSPTRG00000002124	TARBP1	99	87.761	ENSEASG00005000252	TARBP1	99	87.761	Equus_asinus_asinus
ENSPTRG00000002124	TARBP1	99	87.761	ENSECAG00000023673	TARBP1	99	88.184	Equus_caballus
ENSPTRG00000002124	TARBP1	85	44.798	ENSELUG00000012193	si:dkey-85a20.4	86	44.798	Esox_lucius
ENSPTRG00000002124	TARBP1	99	83.333	ENSFCAG00000014183	TARBP1	99	83.333	Felis_catus
ENSPTRG00000002124	TARBP1	80	68.788	ENSFALG00000013565	TARBP1	99	68.783	Ficedula_albicollis
ENSPTRG00000002124	TARBP1	79	76.700	ENSFDAG00000001308	TARBP1	99	76.623	Fukomys_damarensis
ENSPTRG00000002124	TARBP1	81	54.875	ENSFHEG00000007565	si:dkey-85a20.4	76	54.875	Fundulus_heteroclitus
ENSPTRG00000002124	TARBP1	84	43.206	ENSGMOG00000004549	si:dkey-85a20.4	99	43.278	Gadus_morhua
ENSPTRG00000002124	TARBP1	97	64.800	ENSGALG00000011000	TARBP1	100	64.600	Gallus_gallus
ENSPTRG00000002124	TARBP1	99	41.742	ENSGAFG00000007387	si:dkey-85a20.4	85	44.947	Gambusia_affinis
ENSPTRG00000002124	TARBP1	86	45.378	ENSGACG00000005865	si:dkey-85a20.4	99	45.474	Gasterosteus_aculeatus
ENSPTRG00000002124	TARBP1	99	66.707	ENSGAGG00000012102	TARBP1	97	71.609	Gopherus_agassizii
ENSPTRG00000002124	TARBP1	85	95.273	ENSGGOG00000022879	TARBP1	100	95.273	Gorilla_gorilla
ENSPTRG00000002124	TARBP1	86	46.366	ENSHBUG00000008877	si:dkey-85a20.4	85	46.530	Haplochromis_burtoni
ENSPTRG00000002124	TARBP1	99	78.470	ENSHGLG00000011592	TARBP1	99	78.532	Heterocephalus_glaber_female
ENSPTRG00000002124	TARBP1	94	78.749	ENSHGLG00100015169	TARBP1	99	78.536	Heterocephalus_glaber_male
ENSPTRG00000002124	TARBP1	99	40.750	ENSIPUG00000005249	si:dkey-85a20.4	84	43.710	Ictalurus_punctatus
ENSPTRG00000002124	TARBP1	87	76.431	ENSSTOG00000032291	TARBP1	99	76.283	Ictidomys_tridecemlineatus
ENSPTRG00000002124	TARBP1	95	73.039	ENSJJAG00000017840	Tarbp1	99	73.039	Jaculus_jaculus
ENSPTRG00000002124	TARBP1	79	48.128	ENSKMAG00000017546	si:dkey-85a20.4	71	48.529	Kryptolebias_marmoratus
ENSPTRG00000002124	TARBP1	65	50.536	ENSLBEG00000012132	si:dkey-85a20.4	75	50.670	Labrus_bergylta
ENSPTRG00000002124	TARBP1	99	51.718	ENSLACG00000004337	TARBP1	99	51.024	Latimeria_chalumnae
ENSPTRG00000002124	TARBP1	99	46.514	ENSLOCG00000016214	si:dkey-85a20.4	85	50.424	Lepisosteus_oculatus
ENSPTRG00000002124	TARBP1	96	81.950	ENSLAFG00000011394	TARBP1	100	82.150	Loxodonta_africana
ENSPTRG00000002124	TARBP1	100	92.923	ENSMFAG00000041068	TARBP1	100	93.046	Macaca_fascicularis
ENSPTRG00000002124	TARBP1	100	94.338	ENSMMUG00000021703	TARBP1	100	94.338	Macaca_mulatta
ENSPTRG00000002124	TARBP1	100	96.734	ENSMNEG00000045002	TARBP1	100	96.734	Macaca_nemestrina
ENSPTRG00000002124	TARBP1	83	97.048	ENSMLEG00000044182	TARBP1	100	97.048	Mandrillus_leucophaeus
ENSPTRG00000002124	TARBP1	95	43.934	ENSMAMG00000021760	si:dkey-85a20.4	89	45.448	Mastacembelus_armatus
ENSPTRG00000002124	TARBP1	86	46.295	ENSMZEG00005005751	si:dkey-85a20.4	85	46.295	Maylandia_zebra
ENSPTRG00000002124	TARBP1	99	74.058	ENSMAUG00000020968	Tarbp1	99	73.687	Mesocricetus_auratus
ENSPTRG00000002124	TARBP1	99	79.914	ENSMICG00000015280	TARBP1	99	79.754	Microcebus_murinus
ENSPTRG00000002124	TARBP1	99	73.564	ENSMOCG00000004128	Tarbp1	99	73.687	Microtus_ochrogaster
ENSPTRG00000002124	TARBP1	99	41.279	ENSMMOG00000007795	si:dkey-85a20.4	88	43.556	Mola_mola
ENSPTRG00000002124	TARBP1	99	72.634	ENSMODG00000008504	TARBP1	100	72.574	Monodelphis_domestica
ENSPTRG00000002124	TARBP1	85	45.000	ENSMALG00000002916	si:dkey-85a20.4	88	44.437	Monopterus_albus
ENSPTRG00000002124	TARBP1	99	72.682	MGP_CAROLIEiJ_G0031729	Tarbp1	99	72.621	Mus_caroli
ENSPTRG00000002124	TARBP1	99	72.497	ENSMUSG00000090290	Tarbp1	99	72.435	Mus_musculus
ENSPTRG00000002124	TARBP1	99	72.963	MGP_PahariEiJ_G0023326	Tarbp1	99	72.901	Mus_pahari
ENSPTRG00000002124	TARBP1	99	72.582	MGP_SPRETEiJ_G0032846	Tarbp1	99	72.520	Mus_spretus
ENSPTRG00000002124	TARBP1	76	83.897	ENSMPUG00000002802	TARBP1	99	83.816	Mustela_putorius_furo
ENSPTRG00000002124	TARBP1	84	75.581	ENSMLUG00000002414	TARBP1	99	75.581	Myotis_lucifugus
ENSPTRG00000002124	TARBP1	100	98.213	ENSNLEG00000002518	TARBP1	100	98.213	Nomascus_leucogenys
ENSPTRG00000002124	TARBP1	69	77.331	ENSMEUG00000011370	-	69	77.331	Notamacropus_eugenii
ENSPTRG00000002124	TARBP1	71	86.070	ENSOPRG00000013822	TARBP1	71	86.070	Ochotona_princeps
ENSPTRG00000002124	TARBP1	99	72.800	ENSODEG00000005238	TARBP1	99	74.168	Octodon_degus
ENSPTRG00000002124	TARBP1	86	46.268	ENSONIG00000009789	si:dkey-85a20.4	99	46.338	Oreochromis_niloticus
ENSPTRG00000002124	TARBP1	100	85.240	ENSOCUG00000017418	TARBP1	99	85.178	Oryctolagus_cuniculus
ENSPTRG00000002124	TARBP1	99	40.215	ENSORLG00000010529	si:dkey-85a20.4	88	42.711	Oryzias_latipes
ENSPTRG00000002124	TARBP1	99	39.904	ENSORLG00020019264	si:dkey-85a20.4	88	42.439	Oryzias_latipes_hni
ENSPTRG00000002124	TARBP1	99	40.168	ENSORLG00015003276	si:dkey-85a20.4	87	42.828	Oryzias_latipes_hsok
ENSPTRG00000002124	TARBP1	99	84.412	ENSOGAG00000002379	TARBP1	100	84.350	Otolemur_garnettii
ENSPTRG00000002124	TARBP1	91	89.130	ENSOARG00000003434	TARBP1	99	83.981	Ovis_aries
ENSPTRG00000002124	TARBP1	84	99.633	ENSPPAG00000028097	TARBP1	100	99.633	Pan_paniscus
ENSPTRG00000002124	TARBP1	95	86.905	ENSPPRG00000013561	TARBP1	99	75.107	Panthera_pardus
ENSPTRG00000002124	TARBP1	83	85.863	ENSPTIG00000009281	TARBP1	99	85.863	Panthera_tigris_altaica
ENSPTRG00000002124	TARBP1	100	96.919	ENSPANG00000021933	TARBP1	100	96.919	Papio_anubis
ENSPTRG00000002124	TARBP1	100	43.178	ENSPKIG00000016716	si:dkey-85a20.4	88	45.957	Paramormyrops_kingsleyae
ENSPTRG00000002124	TARBP1	79	71.085	ENSPSIG00000010699	TARBP1	100	71.008	Pelodiscus_sinensis
ENSPTRG00000002124	TARBP1	95	76.725	ENSPEMG00000006888	Tarbp1	99	77.215	Peromyscus_maniculatus_bairdii
ENSPTRG00000002124	TARBP1	92	82.524	ENSPCIG00000029710	TARBP1	99	82.524	Phascolarctos_cinereus
ENSPTRG00000002124	TARBP1	86	45.384	ENSPFOG00000013020	si:dkey-85a20.4	99	45.455	Poecilia_formosa
ENSPTRG00000002124	TARBP1	99	42.184	ENSPLAG00000006044	si:dkey-85a20.4	85	45.493	Poecilia_latipinna
ENSPTRG00000002124	TARBP1	99	42.216	ENSPMEG00000017857	si:dkey-85a20.4	85	45.423	Poecilia_mexicana
ENSPTRG00000002124	TARBP1	93	43.786	ENSPREG00000022753	si:dkey-85a20.4	85	45.531	Poecilia_reticulata
ENSPTRG00000002124	TARBP1	97	98.647	ENSPPYG00000000102	TARBP1	100	98.647	Pongo_abelii
ENSPTRG00000002124	TARBP1	85	94.000	ENSPCAG00000004808	TARBP1	85	94.000	Procavia_capensis
ENSPTRG00000002124	TARBP1	99	86.322	ENSPCOG00000005666	TARBP1	100	85.952	Propithecus_coquereli
ENSPTRG00000002124	TARBP1	99	67.708	ENSPVAG00000014798	TARBP1	99	67.766	Pteropus_vampyrus
ENSPTRG00000002124	TARBP1	86	45.196	ENSPNYG00000019135	si:dkey-85a20.4	85	45.014	Pundamilia_nyererei
ENSPTRG00000002124	TARBP1	99	68.931	ENSRNOG00000053574	Tarbp1	99	68.314	Rattus_norvegicus
ENSPTRG00000002124	TARBP1	98	90.331	ENSRBIG00000043362	TARBP1	100	90.701	Rhinopithecus_bieti
ENSPTRG00000002124	TARBP1	100	92.421	ENSRROG00000029527	TARBP1	100	92.483	Rhinopithecus_roxellana
ENSPTRG00000002124	TARBP1	89	95.565	ENSSBOG00000034503	TARBP1	100	93.281	Saimiri_boliviensis_boliviensis
ENSPTRG00000002124	TARBP1	83	75.682	ENSSHAG00000000013	TARBP1	100	75.682	Sarcophilus_harrisii
ENSPTRG00000002124	TARBP1	83	46.076	ENSSFOG00015002660	si:dkey-85a20.4	97	47.305	Scleropages_formosus
ENSPTRG00000002124	TARBP1	91	44.581	ENSSMAG00000007081	si:dkey-85a20.4	88	45.185	Scophthalmus_maximus
ENSPTRG00000002124	TARBP1	99	41.398	ENSSDUG00000023566	si:dkey-85a20.4	86	44.728	Seriola_dumerili
ENSPTRG00000002124	TARBP1	99	43.284	ENSSLDG00000020200	si:dkey-85a20.4	86	46.569	Seriola_lalandi_dorsalis
ENSPTRG00000002124	TARBP1	89	85.714	ENSSARG00000012207	TARBP1	89	85.714	Sorex_araneus
ENSPTRG00000002124	TARBP1	99	64.875	ENSSPUG00000015364	TARBP1	100	64.857	Sphenodon_punctatus
ENSPTRG00000002124	TARBP1	88	45.312	ENSSPAG00000007213	si:dkey-85a20.4	89	45.139	Stegastes_partitus
ENSPTRG00000002124	TARBP1	99	85.249	ENSSSCG00000010160	TARBP1	99	85.392	Sus_scrofa
ENSPTRG00000002124	TARBP1	80	68.755	ENSTGUG00000010214	TARBP1	100	68.755	Taeniopygia_guttata
ENSPTRG00000002124	TARBP1	91	40.926	ENSTNIG00000016586	si:dkey-85a20.4	99	45.178	Tetraodon_nigroviridis
ENSPTRG00000002124	TARBP1	91	83.066	ENSTTRG00000008707	TARBP1	95	84.940	Tursiops_truncatus
ENSPTRG00000002124	TARBP1	82	84.940	ENSUMAG00000006730	TARBP1	99	84.940	Ursus_maritimus
ENSPTRG00000002124	TARBP1	80	91.753	ENSVPAG00000007665	TARBP1	86	91.753	Vicugna_pacos
ENSPTRG00000002124	TARBP1	85	85.983	ENSVVUG00000007460	TARBP1	97	85.694	Vulpes_vulpes
ENSPTRG00000002124	TARBP1	84	56.423	ENSXETG00000016224	tarbp1	99	56.350	Xenopus_tropicalis
ENSPTRG00000002124	TARBP1	78	49.113	ENSXCOG00000011779	si:dkey-85a20.4	93	49.113	Xiphophorus_couchianus
ENSPTRG00000002124	TARBP1	65	43.580	ENSXMAG00000009600	si:dkey-85a20.4	100	43.205	Xiphophorus_maculatus