EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000002182 (Gene tree)
Gene ID: 457867
Gene Symbol: HNRNPU
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 17859 bases
Position: chr1:224177110-224194968
Accession: 11451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000064493	SAP	PF02037.27	4.3e-10	1	1
ENSPTRP00000072294	SAP	PF02037.27	4.6e-10	1	1
ENSPTRP00000003693	SAP	PF02037.27	5e-10	1	1
ENSPTRP00000062616	SAP	PF02037.27	5e-10	1	1
ENSPTRP00000083861	SAP	PF02037.27	5e-10	1	1
ENSPTRP00000084872	SAP	PF02037.27	5.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000077818	-	2406	-	ENSPTRP00000062616	801 (aa)	-	A0A2I3RDZ8
ENSPTRT00000086497	-	2235	-	ENSPTRP00000072294	744 (aa)	-	A0A2I3S648
ENSPTRT00000096546	-	2172	-	ENSPTRP00000064493	723 (aa)	-	A0A2I3RIH9
ENSPTRT00000087527	-	5896	XM_016922581	ENSPTRP00000084872	825 (aa)	XP_016778070	K7CHI6
ENSPTRT00000004000	-	2394	-	ENSPTRP00000003693	797 (aa)	-	H2Q1G0
ENSPTRT00000079427	-	2436	-	ENSPTRP00000083861	804 (aa)	-	A0A2I3T4T1

Gene Model

Click here to download ENSPTRG00000002182's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000002182's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000002182	HNRNPU	77	48.410	ENSPTRG00000034359	HNRNPUL2	67	51.190
ENSPTRG00000002182	HNRNPU	85	49.841	ENSPTRG00000011019	HNRNPUL1	75	56.522

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000002182	HNRNPU	100	100.000	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSPTRG00000002182	HNRNPU	79	77.083	ENSAPOG00000017400	hnrnpub	87	77.083	Acanthochromis_polyacanthus
ENSPTRG00000002182	HNRNPU	99	98.499	ENSAMEG00000009145	HNRNPU	100	94.915	Ailuropoda_melanoleuca
ENSPTRG00000002182	HNRNPU	98	56.552	ENSACIG00000012138	hnrnpub	87	80.952	Amphilophus_citrinellus
ENSPTRG00000002182	HNRNPU	79	75.000	ENSAOCG00000015843	hnrnpub	89	61.538	Amphiprion_ocellaris
ENSPTRG00000002182	HNRNPU	79	75.000	ENSAPEG00000014679	hnrnpub	89	61.538	Amphiprion_percula
ENSPTRG00000002182	HNRNPU	98	56.432	ENSATEG00000016178	hnrnpub	81	60.745	Anabas_testudineus
ENSPTRG00000002182	HNRNPU	80	88.889	ENSACAG00000004511	HNRNPU	79	82.667	Anolis_carolinensis
ENSPTRG00000002182	HNRNPU	100	99.876	ENSANAG00000033895	-	100	99.876	Aotus_nancymaae
ENSPTRG00000002182	HNRNPU	81	83.333	ENSACLG00000008165	hnrnpub	85	83.333	Astatotilapia_calliptera
ENSPTRG00000002182	HNRNPU	100	98.545	ENSBTAG00000007606	HNRNPU	100	98.545	Bos_taurus
ENSPTRG00000002182	HNRNPU	100	99.636	ENSCJAG00000016914	HNRNPU	100	99.636	Callithrix_jacchus
ENSPTRG00000002182	HNRNPU	100	98.756	ENSCAFG00020000918	HNRNPU	100	98.756	Canis_lupus_dingo
ENSPTRG00000002182	HNRNPU	100	98.377	ENSCHIG00000004900	HNRNPU	100	98.377	Capra_hircus
ENSPTRG00000002182	HNRNPU	100	97.939	ENSCPOG00000011887	HNRNPU	100	97.939	Cavia_porcellus
ENSPTRG00000002182	HNRNPU	100	99.723	ENSCCAG00000037859	-	100	99.723	Cebus_capucinus
ENSPTRG00000002182	HNRNPU	100	99.723	ENSCATG00000035273	HNRNPU	100	99.723	Cercocebus_atys
ENSPTRG00000002182	HNRNPU	100	98.182	ENSCLAG00000007100	HNRNPU	100	98.182	Chinchilla_lanigera
ENSPTRG00000002182	HNRNPU	100	98.511	ENSCSAG00000009219	HNRNPU	100	98.511	Chlorocebus_sabaeus
ENSPTRG00000002182	HNRNPU	84	100.000	ENSCHOG00000001387	HNRNPU	79	100.000	Choloepus_hoffmanni
ENSPTRG00000002182	HNRNPU	97	87.896	ENSCPBG00000009415	HNRNPU	88	91.532	Chrysemys_picta_bellii
ENSPTRG00000002182	HNRNPU	100	98.349	ENSCANG00000022780	HNRNPU	100	98.349	Colobus_angolensis_palliatus
ENSPTRG00000002182	HNRNPU	99	98.872	ENSCGRG00001020525	Hnrnpu	100	96.504	Cricetulus_griseus_chok1gshd
ENSPTRG00000002182	HNRNPU	94	54.558	ENSCSEG00000010804	hnrnpub	96	60.924	Cynoglossus_semilaevis
ENSPTRG00000002182	HNRNPU	82	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
ENSPTRG00000002182	HNRNPU	81	62.319	ENSDARG00000015206	hnrnpua	89	62.319	Danio_rerio
ENSPTRG00000002182	HNRNPU	78	85.714	ENSDARG00000004735	hnrnpub	90	59.459	Danio_rerio
ENSPTRG00000002182	HNRNPU	81	100.000	ENSDNOG00000000215	HNRNPU	88	100.000	Dasypus_novemcinctus
ENSPTRG00000002182	HNRNPU	100	91.656	ENSDORG00000015491	Hnrnpu	100	91.781	Dipodomys_ordii
ENSPTRG00000002182	HNRNPU	96	98.684	ENSETEG00000014565	HNRNPU	100	92.308	Echinops_telfairi
ENSPTRG00000002182	HNRNPU	100	97.146	ENSEASG00005003017	HNRNPU	100	97.146	Equus_asinus_asinus
ENSPTRG00000002182	HNRNPU	100	97.022	ENSECAG00000007955	HNRNPU	100	97.022	Equus_caballus
ENSPTRG00000002182	HNRNPU	99	51.355	ENSELUG00000011966	hnrnpua	67	72.973	Esox_lucius
ENSPTRG00000002182	HNRNPU	98	57.902	ENSELUG00000010733	hnrnpub	82	57.012	Esox_lucius
ENSPTRG00000002182	HNRNPU	100	98.387	ENSFCAG00000002156	HNRNPU	100	98.387	Felis_catus
ENSPTRG00000002182	HNRNPU	99	94.168	ENSFDAG00000006026	HNRNPU	100	98.990	Fukomys_damarensis
ENSPTRG00000002182	HNRNPU	80	69.643	ENSFHEG00000022639	hnrnpub	88	69.643	Fundulus_heteroclitus
ENSPTRG00000002182	HNRNPU	92	57.536	ENSGMOG00000001755	hnrnpub	77	60.891	Gadus_morhua
ENSPTRG00000002182	HNRNPU	96	89.062	ENSGALG00000010671	HNRNPU	100	77.830	Gallus_gallus
ENSPTRG00000002182	HNRNPU	79	78.261	ENSGAFG00000009369	hnrnpub	84	78.261	Gambusia_affinis
ENSPTRG00000002182	HNRNPU	78	74.000	ENSGACG00000004679	hnrnpub	72	77.083	Gasterosteus_aculeatus
ENSPTRG00000002182	HNRNPU	100	99.515	ENSGGOG00000004061	HNRNPU	100	99.515	Gorilla_gorilla
ENSPTRG00000002182	HNRNPU	79	83.333	ENSHBUG00000012290	hnrnpub	85	83.333	Haplochromis_burtoni
ENSPTRG00000002182	HNRNPU	100	97.385	ENSHGLG00000010594	-	100	97.385	Heterocephalus_glaber_female
ENSPTRG00000002182	HNRNPU	90	99.328	ENSHGLG00100015093	HNRNPU	100	99.328	Heterocephalus_glaber_male
ENSPTRG00000002182	HNRNPU	77	83.333	ENSHCOG00000020091	hnrnpub	83	79.545	Hippocampus_comes
ENSPTRG00000002182	HNRNPU	80	78.261	ENSIPUG00000007749	hnrnpu	92	72.549	Ictalurus_punctatus
ENSPTRG00000002182	HNRNPU	99	99.060	ENSJJAG00000011371	Hnrnpu	100	96.614	Jaculus_jaculus
ENSPTRG00000002182	HNRNPU	95	53.194	ENSKMAG00000004532	hnrnpub	88	59.155	Kryptolebias_marmoratus
ENSPTRG00000002182	HNRNPU	82	58.667	ENSLBEG00000022520	hnrnpub	87	61.194	Labrus_bergylta
ENSPTRG00000002182	HNRNPU	99	62.840	ENSLACG00000017463	HNRNPU	99	63.060	Latimeria_chalumnae
ENSPTRG00000002182	HNRNPU	82	80.435	ENSLOCG00000016652	hnrnpua	75	67.528	Lepisosteus_oculatus
ENSPTRG00000002182	HNRNPU	100	97.939	ENSLAFG00000021377	HNRNPU	100	97.939	Loxodonta_africana
ENSPTRG00000002182	HNRNPU	100	99.723	ENSMFAG00000037308	HNRNPU	100	99.723	Macaca_fascicularis
ENSPTRG00000002182	HNRNPU	100	99.374	ENSMMUG00000021098	HNRNPU	100	99.374	Macaca_mulatta
ENSPTRG00000002182	HNRNPU	100	99.723	ENSMNEG00000043645	HNRNPU	100	99.723	Macaca_nemestrina
ENSPTRG00000002182	HNRNPU	79	73.077	ENSMAMG00000007196	hnrnpub	86	73.077	Mastacembelus_armatus
ENSPTRG00000002182	HNRNPU	81	83.333	ENSMZEG00005003185	hnrnpub	85	83.333	Maylandia_zebra
ENSPTRG00000002182	HNRNPU	99	98.872	ENSMAUG00000008842	Hnrnpu	100	96.504	Mesocricetus_auratus
ENSPTRG00000002182	HNRNPU	100	98.909	ENSMICG00000004616	HNRNPU	100	98.909	Microcebus_murinus
ENSPTRG00000002182	HNRNPU	99	98.684	ENSMOCG00000015623	Hnrnpu	100	96.380	Microtus_ochrogaster
ENSPTRG00000002182	HNRNPU	100	91.059	ENSMODG00000006515	HNRNPU	100	92.941	Monodelphis_domestica
ENSPTRG00000002182	HNRNPU	79	70.588	ENSMALG00000018243	hnrnpub	84	61.486	Monopterus_albus
ENSPTRG00000002182	HNRNPU	100	96.758	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.758	Mus_caroli
ENSPTRG00000002182	HNRNPU	100	96.883	ENSMUSG00000039630	Hnrnpu	100	96.883	Mus_musculus
ENSPTRG00000002182	HNRNPU	100	96.015	MGP_PahariEiJ_G0028193	Hnrnpu	100	96.015	Mus_pahari
ENSPTRG00000002182	HNRNPU	100	96.883	MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.883	Mus_spretus
ENSPTRG00000002182	HNRNPU	92	96.998	ENSMLUG00000000475	HNRNPU	100	88.366	Myotis_lucifugus
ENSPTRG00000002182	HNRNPU	100	96.879	ENSNGAG00000019075	Hnrnpu	100	96.879	Nannospalax_galili
ENSPTRG00000002182	HNRNPU	81	83.333	ENSNBRG00000017855	hnrnpub	85	83.333	Neolamprologus_brichardi
ENSPTRG00000002182	HNRNPU	99	88.285	ENSMEUG00000000541	HNRNPU	100	90.097	Notamacropus_eugenii
ENSPTRG00000002182	HNRNPU	70	97.087	ENSODEG00000014458	-	100	97.087	Octodon_degus
ENSPTRG00000002182	HNRNPU	81	83.333	ENSONIG00000001260	hnrnpub	88	83.333	Oreochromis_niloticus
ENSPTRG00000002182	HNRNPU	98	98.639	ENSOCUG00000014469	HNRNPU	93	98.639	Oryctolagus_cuniculus
ENSPTRG00000002182	HNRNPU	79	78.261	ENSORLG00000016114	hnrnpub	86	83.333	Oryzias_latipes
ENSPTRG00000002182	HNRNPU	79	78.261	ENSORLG00020005363	hnrnpub	86	83.333	Oryzias_latipes_hni
ENSPTRG00000002182	HNRNPU	79	78.261	ENSORLG00015001190	hnrnpub	86	83.333	Oryzias_latipes_hsok
ENSPTRG00000002182	HNRNPU	79	78.261	ENSOMEG00000014951	hnrnpub	86	83.333	Oryzias_melastigma
ENSPTRG00000002182	HNRNPU	100	97.643	ENSOGAG00000014024	HNRNPU	100	97.643	Otolemur_garnettii
ENSPTRG00000002182	HNRNPU	83	100.000	ENSOARG00000004985	HNRNPU	91	98.658	Ovis_aries
ENSPTRG00000002182	HNRNPU	100	100.000	ENSPPAG00000038652	HNRNPU	100	100.000	Pan_paniscus
ENSPTRG00000002182	HNRNPU	100	98.545	ENSPPRG00000002662	HNRNPU	100	98.545	Panthera_pardus
ENSPTRG00000002182	HNRNPU	100	99.723	ENSPANG00000011643	HNRNPU	100	99.723	Papio_anubis
ENSPTRG00000002182	HNRNPU	78	80.851	ENSPKIG00000006885	hnrnpua	93	59.121	Paramormyrops_kingsleyae
ENSPTRG00000002182	HNRNPU	98	61.096	ENSPKIG00000022332	hnrnpub	85	71.698	Paramormyrops_kingsleyae
ENSPTRG00000002182	HNRNPU	100	95.227	ENSPCIG00000008657	HNRNPU	100	95.227	Phascolarctos_cinereus
ENSPTRG00000002182	HNRNPU	81	64.062	ENSPFOG00000002908	hnrnpub	89	60.811	Poecilia_formosa
ENSPTRG00000002182	HNRNPU	81	64.062	ENSPLAG00000004160	hnrnpub	89	60.811	Poecilia_latipinna
ENSPTRG00000002182	HNRNPU	100	93.009	ENSPCOG00000003883	-	100	93.052	Propithecus_coquereli
ENSPTRG00000002182	HNRNPU	100	98.788	ENSPCOG00000018655	-	100	98.788	Propithecus_coquereli
ENSPTRG00000002182	HNRNPU	100	98.545	ENSPVAG00000002581	HNRNPU	100	98.545	Pteropus_vampyrus
ENSPTRG00000002182	HNRNPU	81	83.333	ENSPNYG00000021642	hnrnpub	85	83.333	Pundamilia_nyererei
ENSPTRG00000002182	HNRNPU	98	61.351	ENSPNAG00000001055	hnrnpub	86	61.043	Pygocentrus_nattereri
ENSPTRG00000002182	HNRNPU	100	96.504	ENSRNOG00000033790	Hnrnpu	100	96.504	Rattus_norvegicus
ENSPTRG00000002182	HNRNPU	100	98.755	ENSRBIG00000031519	HNRNPU	100	98.755	Rhinopithecus_bieti
ENSPTRG00000002182	HNRNPU	100	98.900	ENSRROG00000041642	HNRNPU	100	98.900	Rhinopithecus_roxellana
ENSPTRG00000002182	HNRNPU	98	61.238	ENSSFOG00015019004	hnrnpu	88	62.228	Scleropages_formosus
ENSPTRG00000002182	HNRNPU	98	61.892	ENSSFOG00015001124	hnrnpub	78	65.839	Scleropages_formosus
ENSPTRG00000002182	HNRNPU	73	70.588	ENSSMAG00000003607	hnrnpub	83	70.588	Scophthalmus_maximus
ENSPTRG00000002182	HNRNPU	79	70.588	ENSSDUG00000005912	hnrnpub	85	70.588	Seriola_dumerili
ENSPTRG00000002182	HNRNPU	79	70.588	ENSSLDG00000004899	hnrnpub	85	70.588	Seriola_lalandi_dorsalis
ENSPTRG00000002182	HNRNPU	97	90.994	ENSSPUG00000011393	HNRNPU	90	90.619	Sphenodon_punctatus
ENSPTRG00000002182	HNRNPU	73	78.261	ENSSPAG00000011853	hnrnpub	86	78.261	Stegastes_partitus
ENSPTRG00000002182	HNRNPU	100	98.788	ENSSSCG00000010877	HNRNPU	100	98.788	Sus_scrofa
ENSPTRG00000002182	HNRNPU	99	55.541	ENSTRUG00000007759	hnrnpub	85	64.706	Takifugu_rubripes
ENSPTRG00000002182	HNRNPU	99	51.638	ENSTNIG00000009725	hnrnpub	90	68.085	Tetraodon_nigroviridis
ENSPTRG00000002182	HNRNPU	71	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSPTRG00000002182	HNRNPU	100	98.788	ENSUAMG00000021120	HNRNPU	100	98.788	Ursus_americanus
ENSPTRG00000002182	HNRNPU	98	89.510	ENSUMAG00000012322	HNRNPU	98	96.396	Ursus_maritimus
ENSPTRG00000002182	HNRNPU	86	98.198	ENSVPAG00000010520	HNRNPU	91	98.198	Vicugna_pacos
ENSPTRG00000002182	HNRNPU	100	98.756	ENSVVUG00000026524	HNRNPU	100	98.756	Vulpes_vulpes
ENSPTRG00000002182	HNRNPU	99	75.949	ENSXETG00000011386	hnrnpu	99	69.146	Xenopus_tropicalis
ENSPTRG00000002182	HNRNPU	99	46.282	ENSXMAG00000010356	hnrnpub	97	78.261	Xiphophorus_maculatus