EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000002235 (Gene tree)
Gene ID: 450259
Gene Symbol: LARP4B
Alias: -
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 121941 bases
Position: chr10:873693-995633
Accession: 5492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000075600	La	PF05383.17	4.2e-14	1	1
ENSPTRP00000003777	La	PF05383.17	4.2e-14	1	1
ENSPTRP00000077402	La	PF05383.17	4.2e-14	1	1
ENSPTRP00000092263	La	PF05383.17	4.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000099227	-	2267	-	ENSPTRP00000075600	753 (aa)	-	A0A2I3SF36
ENSPTRT00000004091	-	2459	XM_009457841	ENSPTRP00000003777	738 (aa)	XP_009456116	H2Q1I9
ENSPTRT00000093186	-	5924	XM_009457842	ENSPTRP00000077402	738 (aa)	XP_009456117	H2Q1I9
ENSPTRT00000105180	-	2196	-	ENSPTRP00000092263	731 (aa)	-	A0A2I3TSQ8

Gene Model

Click here to download ENSPTRG00000002235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000002235's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000002235	LARP4B	85	52.273	ENSPTRG00000004935	LARP4	99	52.273
ENSPTRG00000002235	LARP4B	54	40.580	ENSPTRG00000045907	-	95	42.204

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000002235	LARP4B	100	99.322	ENSG00000107929	LARP4B	100	100.000	Homo_sapiens
ENSPTRG00000002235	LARP4B	100	55.453	ENSAPOG00000020531	LARP4B	100	55.906	Acanthochromis_polyacanthus
ENSPTRG00000002235	LARP4B	100	85.115	ENSAMEG00000001810	LARP4B	100	85.115	Ailuropoda_melanoleuca
ENSPTRG00000002235	LARP4B	87	56.902	ENSAOCG00000007887	-	79	84.106	Amphiprion_ocellaris
ENSPTRG00000002235	LARP4B	96	57.312	ENSAPEG00000002512	LARP4B	98	56.599	Amphiprion_percula
ENSPTRG00000002235	LARP4B	100	54.613	ENSATEG00000012614	LARP4B	100	55.237	Anabas_testudineus
ENSPTRG00000002235	LARP4B	100	74.133	ENSAPLG00000003813	LARP4B	98	74.133	Anas_platyrhynchos
ENSPTRG00000002235	LARP4B	100	73.164	ENSACAG00000002858	LARP4B	100	73.164	Anolis_carolinensis
ENSPTRG00000002235	LARP4B	100	96.070	ENSANAG00000007531	-	100	96.070	Aotus_nancymaae
ENSPTRG00000002235	LARP4B	100	56.663	ENSACLG00000026356	LARP4B	100	57.731	Astatotilapia_calliptera
ENSPTRG00000002235	LARP4B	96	51.012	ENSAMXG00000003335	larp4b	97	50.877	Astyanax_mexicanus
ENSPTRG00000002235	LARP4B	100	81.646	ENSBTAG00000013899	LARP4B	100	81.646	Bos_taurus
ENSPTRG00000002235	LARP4B	100	95.257	ENSCJAG00000018434	LARP4B	100	95.257	Callithrix_jacchus
ENSPTRG00000002235	LARP4B	100	85.386	ENSCAFG00020004209	LARP4B	100	85.386	Canis_lupus_dingo
ENSPTRG00000002235	LARP4B	100	81.916	ENSCHIG00000013543	LARP4B	100	81.916	Capra_hircus
ENSPTRG00000002235	LARP4B	80	93.266	ENSTSYG00000002568	LARP4B	100	93.266	Carlito_syrichta
ENSPTRG00000002235	LARP4B	96	77.560	ENSCAPG00000009725	LARP4B	97	77.560	Cavia_aperea
ENSPTRG00000002235	LARP4B	100	87.940	ENSCPOG00000009375	LARP4B	100	87.940	Cavia_porcellus
ENSPTRG00000002235	LARP4B	100	95.935	ENSCCAG00000024869	LARP4B	100	95.935	Cebus_capucinus
ENSPTRG00000002235	LARP4B	100	98.238	ENSCATG00000019750	LARP4B	100	98.238	Cercocebus_atys
ENSPTRG00000002235	LARP4B	100	88.227	ENSCLAG00000011570	LARP4B	100	88.227	Chinchilla_lanigera
ENSPTRG00000002235	LARP4B	66	88.710	ENSCHOG00000007831	-	66	88.710	Choloepus_hoffmanni
ENSPTRG00000002235	LARP4B	100	73.965	ENSCPBG00000017063	LARP4B	100	73.965	Chrysemys_picta_bellii
ENSPTRG00000002235	LARP4B	100	98.222	ENSCANG00000038021	LARP4B	100	98.222	Colobus_angolensis_palliatus
ENSPTRG00000002235	LARP4B	100	87.973	ENSCGRG00001022930	Larp4b	100	87.973	Cricetulus_griseus_chok1gshd
ENSPTRG00000002235	LARP4B	100	87.973	ENSCGRG00000006022	Larp4b	100	87.973	Cricetulus_griseus_crigri
ENSPTRG00000002235	LARP4B	100	53.745	ENSCSEG00000007342	LARP4B	100	54.079	Cynoglossus_semilaevis
ENSPTRG00000002235	LARP4B	100	55.820	ENSCVAG00000008910	LARP4B	100	56.446	Cyprinodon_variegatus
ENSPTRG00000002235	LARP4B	90	51.367	ENSDARG00000062146	larp4b	91	52.504	Danio_rerio
ENSPTRG00000002235	LARP4B	94	83.989	ENSDNOG00000045543	-	100	87.097	Dasypus_novemcinctus
ENSPTRG00000002235	LARP4B	100	87.842	ENSDORG00000009328	Larp4b	100	87.842	Dipodomys_ordii
ENSPTRG00000002235	LARP4B	85	82.759	ENSETEG00000011249	LARP4B	91	82.759	Echinops_telfairi
ENSPTRG00000002235	LARP4B	100	84.574	ENSEASG00005019068	-	100	84.574	Equus_asinus_asinus
ENSPTRG00000002235	LARP4B	100	84.574	ENSECAG00000024040	LARP4B	100	84.574	Equus_caballus
ENSPTRG00000002235	LARP4B	100	81.941	ENSEEUG00000008391	LARP4B	98	81.941	Erinaceus_europaeus
ENSPTRG00000002235	LARP4B	100	55.362	ENSELUG00000008626	LARP4B	100	56.040	Esox_lucius
ENSPTRG00000002235	LARP4B	89	40.148	ENSELUG00000001417	-	94	39.673	Esox_lucius
ENSPTRG00000002235	LARP4B	100	85.155	ENSFCAG00000000721	-	100	85.155	Felis_catus
ENSPTRG00000002235	LARP4B	100	73.698	ENSFALG00000006961	LARP4B	100	73.698	Ficedula_albicollis
ENSPTRG00000002235	LARP4B	100	88.633	ENSFDAG00000006158	LARP4B	97	88.633	Fukomys_damarensis
ENSPTRG00000002235	LARP4B	100	51.476	ENSFHEG00000013037	LARP4B	65	89.916	Fundulus_heteroclitus
ENSPTRG00000002235	LARP4B	76	63.524	ENSGMOG00000010818	-	89	63.772	Gadus_morhua
ENSPTRG00000002235	LARP4B	100	73.537	ENSGALG00000006672	LARP4B	100	73.537	Gallus_gallus
ENSPTRG00000002235	LARP4B	100	58.679	ENSGACG00000017535	LARP4B	98	58.938	Gasterosteus_aculeatus
ENSPTRG00000002235	LARP4B	91	75.842	ENSGAGG00000008598	LARP4B	100	75.842	Gopherus_agassizii
ENSPTRG00000002235	LARP4B	100	99.322	ENSGGOG00000003572	LARP4B	100	99.322	Gorilla_gorilla
ENSPTRG00000002235	LARP4B	100	56.164	ENSHBUG00000007535	LARP4B	100	57.107	Haplochromis_burtoni
ENSPTRG00000002235	LARP4B	100	89.204	ENSHGLG00000012936	LARP4B	100	89.204	Heterocephalus_glaber_female
ENSPTRG00000002235	LARP4B	88	73.806	ENSHGLG00100017261	-	100	73.806	Heterocephalus_glaber_male
ENSPTRG00000002235	LARP4B	100	89.310	ENSHGLG00100016220	-	100	89.310	Heterocephalus_glaber_male
ENSPTRG00000002235	LARP4B	99	54.319	ENSHCOG00000011581	LARP4B	86	58.485	Hippocampus_comes
ENSPTRG00000002235	LARP4B	90	52.709	ENSIPUG00000009705	larp4b	91	52.562	Ictalurus_punctatus
ENSPTRG00000002235	LARP4B	100	85.811	ENSSTOG00000000587	LARP4B	100	85.811	Ictidomys_tridecemlineatus
ENSPTRG00000002235	LARP4B	100	88.618	ENSJJAG00000020847	Larp4b	100	88.618	Jaculus_jaculus
ENSPTRG00000002235	LARP4B	100	56.375	ENSKMAG00000021674	LARP4B	100	57.250	Kryptolebias_marmoratus
ENSPTRG00000002235	LARP4B	82	58.631	ENSLBEG00000025293	-	85	58.942	Labrus_bergylta
ENSPTRG00000002235	LARP4B	91	66.473	ENSLACG00000009492	LARP4B	100	66.473	Latimeria_chalumnae
ENSPTRG00000002235	LARP4B	100	64.613	ENSLOCG00000012290	larp4b	100	65.801	Lepisosteus_oculatus
ENSPTRG00000002235	LARP4B	100	84.522	ENSLAFG00000015334	LARP4B	100	84.582	Loxodonta_africana
ENSPTRG00000002235	LARP4B	100	98.509	ENSMFAG00000001766	LARP4B	100	98.495	Macaca_fascicularis
ENSPTRG00000002235	LARP4B	100	98.509	ENSMMUG00000005279	LARP4B	100	98.509	Macaca_mulatta
ENSPTRG00000002235	LARP4B	100	98.374	ENSMNEG00000014019	LARP4B	100	98.222	Macaca_nemestrina
ENSPTRG00000002235	LARP4B	100	98.106	ENSMLEG00000035198	LARP4B	100	98.106	Mandrillus_leucophaeus
ENSPTRG00000002235	LARP4B	100	54.545	ENSMAMG00000013742	LARP4B	100	55.168	Mastacembelus_armatus
ENSPTRG00000002235	LARP4B	80	62.921	ENSMZEG00005006498	-	96	62.219	Maylandia_zebra
ENSPTRG00000002235	LARP4B	91	57.395	ENSMZEG00005014594	-	100	58.560	Maylandia_zebra
ENSPTRG00000002235	LARP4B	100	73.031	ENSMGAG00000005472	LARP4B	100	73.031	Meleagris_gallopavo
ENSPTRG00000002235	LARP4B	100	87.584	ENSMAUG00000021657	Larp4b	100	89.631	Mesocricetus_auratus
ENSPTRG00000002235	LARP4B	100	82.791	ENSMICG00000001301	LARP4B	100	82.791	Microcebus_murinus
ENSPTRG00000002235	LARP4B	92	88.421	ENSMOCG00000021452	Larp4b	100	89.104	Microtus_ochrogaster
ENSPTRG00000002235	LARP4B	81	61.401	ENSMMOG00000011253	-	89	62.215	Mola_mola
ENSPTRG00000002235	LARP4B	100	72.751	ENSMODG00000005957	LARP4B	100	72.751	Monodelphis_domestica
ENSPTRG00000002235	LARP4B	100	50.133	ENSMALG00000012432	LARP4B	100	50.133	Monopterus_albus
ENSPTRG00000002235	LARP4B	100	87.415	MGP_CAROLIEiJ_G0018216	Larp4b	100	87.551	Mus_caroli
ENSPTRG00000002235	LARP4B	100	87.314	ENSMUSG00000033499	Larp4b	100	87.449	Mus_musculus
ENSPTRG00000002235	LARP4B	100	87.551	MGP_PahariEiJ_G0019266	Larp4b	100	87.551	Mus_pahari
ENSPTRG00000002235	LARP4B	100	87.179	MGP_SPRETEiJ_G0019074	Larp4b	100	87.314	Mus_spretus
ENSPTRG00000002235	LARP4B	100	84.438	ENSMPUG00000016220	LARP4B	97	84.438	Mustela_putorius_furo
ENSPTRG00000002235	LARP4B	94	81.792	ENSMLUG00000005880	LARP4B	100	81.792	Myotis_lucifugus
ENSPTRG00000002235	LARP4B	100	87.127	ENSNGAG00000001750	Larp4b	100	87.127	Nannospalax_galili
ENSPTRG00000002235	LARP4B	80	56.402	ENSNBRG00000020018	LARP4B	88	56.564	Neolamprologus_brichardi
ENSPTRG00000002235	LARP4B	100	98.780	ENSNLEG00000013442	LARP4B	100	98.780	Nomascus_leucogenys
ENSPTRG00000002235	LARP4B	84	70.652	ENSMEUG00000013114	-	83	70.652	Notamacropus_eugenii
ENSPTRG00000002235	LARP4B	100	86.040	ENSOPRG00000003300	LARP4B	100	86.040	Ochotona_princeps
ENSPTRG00000002235	LARP4B	100	84.146	ENSODEG00000001109	LARP4B	100	86.316	Octodon_degus
ENSPTRG00000002235	LARP4B	100	58.974	ENSONIG00000017705	LARP4B	100	59.487	Oreochromis_niloticus
ENSPTRG00000002235	LARP4B	100	72.090	ENSOANG00000006100	LARP4B	100	72.222	Ornithorhynchus_anatinus
ENSPTRG00000002235	LARP4B	100	87.516	ENSOCUG00000004950	LARP4B	97	87.516	Oryctolagus_cuniculus
ENSPTRG00000002235	LARP4B	100	54.386	ENSORLG00000006080	LARP4B	100	54.637	Oryzias_latipes
ENSPTRG00000002235	LARP4B	100	54.257	ENSORLG00020020940	LARP4B	100	54.384	Oryzias_latipes_hni
ENSPTRG00000002235	LARP4B	100	54.719	ENSORLG00015020608	LARP4B	100	54.847	Oryzias_latipes_hsok
ENSPTRG00000002235	LARP4B	100	53.191	ENSOMEG00000019619	LARP4B	100	53.692	Oryzias_melastigma
ENSPTRG00000002235	LARP4B	94	84.416	ENSOGAG00000011540	LARP4B	100	84.416	Otolemur_garnettii
ENSPTRG00000002235	LARP4B	100	81.855	ENSOARG00000015320	LARP4B	98	81.855	Ovis_aries
ENSPTRG00000002235	LARP4B	100	100.000	ENSPPAG00000039232	LARP4B	100	100.000	Pan_paniscus
ENSPTRG00000002235	LARP4B	100	85.250	ENSPPRG00000009489	LARP4B	100	85.250	Panthera_pardus
ENSPTRG00000002235	LARP4B	100	85.115	ENSPTIG00000008543	LARP4B	100	85.115	Panthera_tigris_altaica
ENSPTRG00000002235	LARP4B	100	98.509	ENSPANG00000023546	LARP4B	100	98.358	Papio_anubis
ENSPTRG00000002235	LARP4B	97	57.239	ENSPKIG00000012368	LARP4B	97	57.105	Paramormyrops_kingsleyae
ENSPTRG00000002235	LARP4B	76	85.032	ENSPSIG00000005600	LARP4B	99	85.032	Pelodiscus_sinensis
ENSPTRG00000002235	LARP4B	97	52.174	ENSPMGG00000008261	LARP4B	91	52.174	Periophthalmus_magnuspinnatus
ENSPTRG00000002235	LARP4B	100	88.347	ENSPEMG00000014052	Larp4b	100	88.347	Peromyscus_maniculatus_bairdii
ENSPTRG00000002235	LARP4B	100	54.895	ENSPFOG00000000029	LARP4B	100	55.886	Poecilia_formosa
ENSPTRG00000002235	LARP4B	100	55.599	ENSPLAG00000002871	LARP4B	100	55.859	Poecilia_latipinna
ENSPTRG00000002235	LARP4B	100	54.827	ENSPMEG00000016361	LARP4B	100	55.817	Poecilia_mexicana
ENSPTRG00000002235	LARP4B	100	98.647	ENSPPYG00000002035	LARP4B	97	98.647	Pongo_abelii
ENSPTRG00000002235	LARP4B	100	86.856	ENSPCOG00000014688	LARP4B	100	86.856	Propithecus_coquereli
ENSPTRG00000002235	LARP4B	85	88.571	ENSPVAG00000009784	LARP4B	88	88.571	Pteropus_vampyrus
ENSPTRG00000002235	LARP4B	100	56.608	ENSPNYG00000024252	LARP4B	100	57.553	Pundamilia_nyererei
ENSPTRG00000002235	LARP4B	94	52.011	ENSPNAG00000028956	larp4b	95	51.872	Pygocentrus_nattereri
ENSPTRG00000002235	LARP4B	99	88.482	ENSRNOG00000015888	Larp4b	100	88.618	Rattus_norvegicus
ENSPTRG00000002235	LARP4B	100	97.967	ENSRBIG00000033294	LARP4B	100	97.967	Rhinopithecus_bieti
ENSPTRG00000002235	LARP4B	100	97.561	ENSRROG00000033879	LARP4B	100	97.561	Rhinopithecus_roxellana
ENSPTRG00000002235	LARP4B	100	90.379	ENSSBOG00000021109	LARP4B	100	90.379	Saimiri_boliviensis_boliviensis
ENSPTRG00000002235	LARP4B	100	75.368	ENSSHAG00000013392	LARP4B	100	75.368	Sarcophilus_harrisii
ENSPTRG00000002235	LARP4B	91	59.052	ENSSFOG00015003256	LARP4B	90	57.333	Scleropages_formosus
ENSPTRG00000002235	LARP4B	100	53.213	ENSSMAG00000005982	-	95	62.295	Scophthalmus_maximus
ENSPTRG00000002235	LARP4B	100	56.700	ENSSDUG00000006704	LARP4B	100	57.196	Seriola_dumerili
ENSPTRG00000002235	LARP4B	80	63.434	ENSSLDG00000020660	LARP4B	91	63.275	Seriola_lalandi_dorsalis
ENSPTRG00000002235	LARP4B	64	97.170	ENSSARG00000001243	-	79	97.170	Sorex_araneus
ENSPTRG00000002235	LARP4B	100	71.525	ENSSPUG00000002102	-	100	71.525	Sphenodon_punctatus
ENSPTRG00000002235	LARP4B	90	79.046	ENSSPUG00000013734	-	91	79.046	Sphenodon_punctatus
ENSPTRG00000002235	LARP4B	85	70.968	ENSSPAG00000014628	LARP4B	88	62.742	Stegastes_partitus
ENSPTRG00000002235	LARP4B	100	82.409	ENSSSCG00000011162	LARP4B	100	84.868	Sus_scrofa
ENSPTRG00000002235	LARP4B	100	74.263	ENSTGUG00000000811	-	100	74.263	Taeniopygia_guttata
ENSPTRG00000002235	LARP4B	99	56.218	ENSTNIG00000007991	LARP4B	99	56.026	Tetraodon_nigroviridis
ENSPTRG00000002235	LARP4B	100	56.939	ENSTNIG00000004571	-	98	57.588	Tetraodon_nigroviridis
ENSPTRG00000002235	LARP4B	90	88.353	ENSTTRG00000011151	LARP4B	90	88.353	Tursiops_truncatus
ENSPTRG00000002235	LARP4B	87	86.646	ENSUAMG00000016461	LARP4B	95	86.646	Ursus_americanus
ENSPTRG00000002235	LARP4B	100	85.792	ENSUMAG00000016127	LARP4B	100	85.792	Ursus_maritimus
ENSPTRG00000002235	LARP4B	51	94.944	ENSVPAG00000000128	-	73	94.944	Vicugna_pacos
ENSPTRG00000002235	LARP4B	100	84.844	ENSVVUG00000008641	LARP4B	100	84.844	Vulpes_vulpes
ENSPTRG00000002235	LARP4B	99	68.609	ENSXETG00000016882	larp4b	100	68.609	Xenopus_tropicalis
ENSPTRG00000002235	LARP4B	100	53.377	ENSXCOG00000019952	LARP4B	65	88.525	Xiphophorus_couchianus
ENSPTRG00000002235	LARP4B	100	55.112	ENSXMAG00000021533	LARP4B	100	55.611	Xiphophorus_maculatus