EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000002265 (Gene tree)
Gene ID: 450286
Gene Symbol: RBM17
Alias: -
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 45735 bases
Position: chr10:6261256-6306990
Accession: 5714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000066083	RRM_1	PF00076.22	2e-05	1	1
ENSPTRP00000083220	RRM_1	PF00076.22	0.00014	1	1
ENSPTRP00000003832	RRM_1	PF00076.22	0.00014	1	1
ENSPTRP00000083220	G-patch	PF01585.23	9.4e-13	1	1
ENSPTRP00000003832	G-patch	PF01585.23	9.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000088323	-	2550	XM_009457868	ENSPTRP00000083220	401 (aa)	XP_009456143	A0A2I3T1W0
ENSPTRT00000004151	-	1203	-	ENSPTRP00000003832	400 (aa)	-	H2Q1L0
ENSPTRT00000108799	-	375	-	ENSPTRP00000066083	124 (aa)	-	A0A2I3RP26

Gene Model

Click here to download ENSPTRG00000002265's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000002265's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000002265	RBM17	100	100.000	ENSG00000134453	RBM17	100	100.000	Homo_sapiens
ENSPTRG00000002265	RBM17	81	40.777	ENSAPOG00000022094	-	80	40.777	Acanthochromis_polyacanthus
ENSPTRG00000002265	RBM17	99	82.878	ENSAPOG00000007101	rbm17	99	82.878	Acanthochromis_polyacanthus
ENSPTRG00000002265	RBM17	100	99.252	ENSAMEG00000002107	RBM17	100	99.252	Ailuropoda_melanoleuca
ENSPTRG00000002265	RBM17	95	89.831	ENSACIG00000006251	rbm17	100	79.310	Amphilophus_citrinellus
ENSPTRG00000002265	RBM17	98	86.777	ENSAOCG00000014892	rbm17	100	82.801	Amphiprion_ocellaris
ENSPTRG00000002265	RBM17	98	86.777	ENSAPEG00000022779	rbm17	100	82.801	Amphiprion_percula
ENSPTRG00000002265	RBM17	97	85.833	ENSATEG00000004406	rbm17	100	78.774	Anabas_testudineus
ENSPTRG00000002265	RBM17	100	95.771	ENSAPLG00000004190	RBM17	100	95.771	Anas_platyrhynchos
ENSPTRG00000002265	RBM17	92	98.246	ENSACAG00000005418	RBM17	99	90.270	Anolis_carolinensis
ENSPTRG00000002265	RBM17	96	93.277	ENSANAG00000019330	-	97	94.915	Aotus_nancymaae
ENSPTRG00000002265	RBM17	100	99.501	ENSANAG00000030127	RBM17	100	99.501	Aotus_nancymaae
ENSPTRG00000002265	RBM17	95	90.678	ENSACLG00000003928	rbm17	100	79.703	Astatotilapia_calliptera
ENSPTRG00000002265	RBM17	98	86.777	ENSAMXG00000005853	rbm17	100	79.703	Astyanax_mexicanus
ENSPTRG00000002265	RBM17	100	97.506	ENSBTAG00000011094	-	100	97.506	Bos_taurus
ENSPTRG00000002265	RBM17	100	99.002	ENSBTAG00000021951	RBM17	100	99.002	Bos_taurus
ENSPTRG00000002265	RBM17	77	37.000	WBGene00010233	F58B3.7	91	32.817	Caenorhabditis_elegans
ENSPTRG00000002265	RBM17	100	99.501	ENSCJAG00000020573	RBM17	100	99.501	Callithrix_jacchus
ENSPTRG00000002265	RBM17	100	99.252	ENSCAFG00000005206	RBM17	100	99.252	Canis_familiaris
ENSPTRG00000002265	RBM17	100	95.250	ENSCAFG00020005420	RBM17	100	95.250	Canis_lupus_dingo
ENSPTRG00000002265	RBM17	100	96.509	ENSCHIG00000019921	-	100	96.509	Capra_hircus
ENSPTRG00000002265	RBM17	100	99.002	ENSCHIG00000023204	-	100	99.002	Capra_hircus
ENSPTRG00000002265	RBM17	100	97.531	ENSTSYG00000001165	RBM17	100	97.531	Carlito_syrichta
ENSPTRG00000002265	RBM17	96	75.844	ENSCAPG00000006275	RBM17	100	80.274	Cavia_aperea
ENSPTRG00000002265	RBM17	100	94.554	ENSCPOG00000005679	RBM17	100	94.554	Cavia_porcellus
ENSPTRG00000002265	RBM17	100	99.501	ENSCCAG00000018655	RBM17	100	99.501	Cebus_capucinus
ENSPTRG00000002265	RBM17	100	100.000	ENSCATG00000041566	RBM17	100	100.000	Cercocebus_atys
ENSPTRG00000002265	RBM17	100	98.272	ENSCLAG00000012195	RBM17	99	98.272	Chinchilla_lanigera
ENSPTRG00000002265	RBM17	100	100.000	ENSCSAG00000013564	RBM17	100	100.000	Chlorocebus_sabaeus
ENSPTRG00000002265	RBM17	92	79.459	ENSCHOG00000005131	RBM17	100	79.459	Choloepus_hoffmanni
ENSPTRG00000002265	RBM17	100	94.776	ENSCPBG00000019836	RBM17	100	94.776	Chrysemys_picta_bellii
ENSPTRG00000002265	RBM17	85	63.208	ENSCING00000004543	-	98	55.615	Ciona_intestinalis
ENSPTRG00000002265	RBM17	79	39.604	ENSCING00000019470	-	69	39.604	Ciona_intestinalis
ENSPTRG00000002265	RBM17	85	65.094	ENSCSAVG00000008782	-	100	46.618	Ciona_savignyi
ENSPTRG00000002265	RBM17	96	90.756	ENSCANG00000023715	-	100	85.714	Colobus_angolensis_palliatus
ENSPTRG00000002265	RBM17	100	99.751	ENSCANG00000030987	RBM17	100	99.751	Colobus_angolensis_palliatus
ENSPTRG00000002265	RBM17	98	83.471	ENSCGRG00001009256	-	100	74.074	Cricetulus_griseus_chok1gshd
ENSPTRG00000002265	RBM17	100	98.519	ENSCGRG00001013842	Rbm17	100	98.519	Cricetulus_griseus_chok1gshd
ENSPTRG00000002265	RBM17	100	98.519	ENSCGRG00000006907	Rbm17	100	98.519	Cricetulus_griseus_crigri
ENSPTRG00000002265	RBM17	100	85.484	ENSCSEG00000018164	rbm17	100	80.049	Cynoglossus_semilaevis
ENSPTRG00000002265	RBM17	92	91.228	ENSCVAG00000002476	rbm17	100	77.667	Cyprinodon_variegatus
ENSPTRG00000002265	RBM17	97	86.667	ENSDARG00000031346	rbm17	100	78.118	Danio_rerio
ENSPTRG00000002265	RBM17	100	99.002	ENSDNOG00000035920	RBM17	100	99.002	Dasypus_novemcinctus
ENSPTRG00000002265	RBM17	82	63.107	FBgn0086683	Spf45	99	36.476	Drosophila_melanogaster
ENSPTRG00000002265	RBM17	94	99.138	ENSETEG00000006642	RBM17	87	97.653	Echinops_telfairi
ENSPTRG00000002265	RBM17	97	55.200	ENSEBUG00000010253	rbm17	90	70.732	Eptatretus_burgeri
ENSPTRG00000002265	RBM17	94	96.552	ENSEASG00005009236	-	100	95.946	Equus_asinus_asinus
ENSPTRG00000002265	RBM17	100	93.333	ENSEASG00005019205	-	100	93.333	Equus_asinus_asinus
ENSPTRG00000002265	RBM17	100	82.793	ENSECAG00000008939	RBM17	100	85.536	Equus_caballus
ENSPTRG00000002265	RBM17	100	88.529	ENSECAG00000001379	-	100	88.529	Equus_caballus
ENSPTRG00000002265	RBM17	86	80.814	ENSEEUG00000013077	RBM17	100	80.814	Erinaceus_europaeus
ENSPTRG00000002265	RBM17	94	88.793	ENSELUG00000006440	rbm17	100	77.083	Esox_lucius
ENSPTRG00000002265	RBM17	100	99.252	ENSFCAG00000031988	RBM17	100	99.252	Felis_catus
ENSPTRG00000002265	RBM17	100	94.763	ENSFALG00000001790	RBM17	100	94.763	Ficedula_albicollis
ENSPTRG00000002265	RBM17	100	98.272	ENSFDAG00000007470	RBM17	100	98.272	Fukomys_damarensis
ENSPTRG00000002265	RBM17	97	88.333	ENSFHEG00000001266	rbm17	100	77.970	Fundulus_heteroclitus
ENSPTRG00000002265	RBM17	92	83.333	ENSGMOG00000008438	rbm17	100	75.297	Gadus_morhua
ENSPTRG00000002265	RBM17	100	95.761	ENSGALG00000006332	RBM17	100	95.761	Gallus_gallus
ENSPTRG00000002265	RBM17	95	88.136	ENSGAFG00000019879	rbm17	100	81.081	Gambusia_affinis
ENSPTRG00000002265	RBM17	97	85.000	ENSGACG00000019174	rbm17	99	81.034	Gasterosteus_aculeatus
ENSPTRG00000002265	RBM17	100	94.776	ENSGAGG00000019906	RBM17	100	94.776	Gopherus_agassizii
ENSPTRG00000002265	RBM17	100	100.000	ENSGGOG00000044184	-	100	100.000	Gorilla_gorilla
ENSPTRG00000002265	RBM17	98	88.430	ENSHBUG00000016624	rbm17	100	83.292	Haplochromis_burtoni
ENSPTRG00000002265	RBM17	100	98.272	ENSHGLG00000011580	RBM17	100	98.272	Heterocephalus_glaber_female
ENSPTRG00000002265	RBM17	94	90.517	ENSHGLG00100010556	-	100	73.827	Heterocephalus_glaber_male
ENSPTRG00000002265	RBM17	100	98.272	ENSHGLG00100010460	RBM17	100	98.272	Heterocephalus_glaber_male
ENSPTRG00000002265	RBM17	96	86.555	ENSHCOG00000010865	rbm17	100	77.804	Hippocampus_comes
ENSPTRG00000002265	RBM17	91	90.265	ENSIPUG00000007699	Rbm17	100	77.518	Ictalurus_punctatus
ENSPTRG00000002265	RBM17	100	98.765	ENSSTOG00000013591	RBM17	100	98.765	Ictidomys_tridecemlineatus
ENSPTRG00000002265	RBM17	100	98.519	ENSJJAG00000022886	Rbm17	100	98.519	Jaculus_jaculus
ENSPTRG00000002265	RBM17	100	73.815	ENSJJAG00000000993	-	100	70.471	Jaculus_jaculus
ENSPTRG00000002265	RBM17	95	89.831	ENSKMAG00000021400	rbm17	100	79.361	Kryptolebias_marmoratus
ENSPTRG00000002265	RBM17	100	82.064	ENSLBEG00000000881	rbm17	100	78.774	Labrus_bergylta
ENSPTRG00000002265	RBM17	92	78.070	ENSLACG00000017297	RBM17	99	69.412	Latimeria_chalumnae
ENSPTRG00000002265	RBM17	100	86.667	ENSLOCG00000015659	rbm17	100	86.667	Lepisosteus_oculatus
ENSPTRG00000002265	RBM17	100	98.034	ENSLAFG00000011629	RBM17	100	98.034	Loxodonta_africana
ENSPTRG00000002265	RBM17	100	100.000	ENSMFAG00000035521	RBM17	100	100.000	Macaca_fascicularis
ENSPTRG00000002265	RBM17	100	100.000	ENSMMUG00000015152	RBM17	100	100.000	Macaca_mulatta
ENSPTRG00000002265	RBM17	100	100.000	ENSMNEG00000017264	RBM17	100	100.000	Macaca_nemestrina
ENSPTRG00000002265	RBM17	100	100.000	ENSMLEG00000029340	RBM17	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000002265	RBM17	95	88.983	ENSMAMG00000000387	rbm17	100	78.066	Mastacembelus_armatus
ENSPTRG00000002265	RBM17	98	88.430	ENSMZEG00005015179	rbm17	100	80.332	Maylandia_zebra
ENSPTRG00000002265	RBM17	100	93.873	ENSMGAG00000003981	RBM17	100	93.873	Meleagris_gallopavo
ENSPTRG00000002265	RBM17	100	98.519	ENSMAUG00000019247	Rbm17	100	98.519	Mesocricetus_auratus
ENSPTRG00000002265	RBM17	100	97.778	ENSMICG00000003976	-	100	97.778	Microcebus_murinus
ENSPTRG00000002265	RBM17	74	97.826	ENSMICG00000047113	-	72	97.826	Microcebus_murinus
ENSPTRG00000002265	RBM17	100	90.220	ENSMICG00000041489	-	100	90.220	Microcebus_murinus
ENSPTRG00000002265	RBM17	100	98.519	ENSMOCG00000011847	Rbm17	100	98.519	Microtus_ochrogaster
ENSPTRG00000002265	RBM17	93	80.267	ENSMOCG00000014517	-	99	80.267	Microtus_ochrogaster
ENSPTRG00000002265	RBM17	100	75.485	ENSMMOG00000010264	rbm17	100	74.696	Mola_mola
ENSPTRG00000002265	RBM17	100	98.005	ENSMODG00000016648	RBM17	100	98.005	Monodelphis_domestica
ENSPTRG00000002265	RBM17	97	85.833	ENSMALG00000010597	rbm17	100	78.378	Monopterus_albus
ENSPTRG00000002265	RBM17	100	98.272	MGP_CAROLIEiJ_G0023173	Rbm17	100	98.272	Mus_caroli
ENSPTRG00000002265	RBM17	100	98.272	ENSMUSG00000037197	Rbm17	100	98.272	Mus_musculus
ENSPTRG00000002265	RBM17	100	97.778	MGP_PahariEiJ_G0019233	Rbm17	100	97.778	Mus_pahari
ENSPTRG00000002265	RBM17	100	98.272	MGP_SPRETEiJ_G0024091	Rbm17	100	98.272	Mus_spretus
ENSPTRG00000002265	RBM17	86	98.555	ENSMPUG00000016359	RBM17	97	98.555	Mustela_putorius_furo
ENSPTRG00000002265	RBM17	100	96.305	ENSMLUG00000002302	-	100	96.305	Myotis_lucifugus
ENSPTRG00000002265	RBM17	100	93.516	ENSMLUG00000025709	-	100	93.516	Myotis_lucifugus
ENSPTRG00000002265	RBM17	100	69.576	ENSNGAG00000000663	-	100	69.154	Nannospalax_galili
ENSPTRG00000002265	RBM17	100	98.519	ENSNGAG00000000741	Rbm17	100	98.519	Nannospalax_galili
ENSPTRG00000002265	RBM17	95	90.678	ENSNBRG00000018148	rbm17	100	77.970	Neolamprologus_brichardi
ENSPTRG00000002265	RBM17	100	100.000	ENSNLEG00000033350	RBM17	100	100.000	Nomascus_leucogenys
ENSPTRG00000002265	RBM17	100	92.020	ENSMEUG00000011347	RBM17	100	92.020	Notamacropus_eugenii
ENSPTRG00000002265	RBM17	100	86.035	ENSOPRG00000002993	RBM17	100	86.035	Ochotona_princeps
ENSPTRG00000002265	RBM17	100	97.537	ENSODEG00000004393	RBM17	100	97.537	Octodon_degus
ENSPTRG00000002265	RBM17	97	74.809	ENSODEG00000007286	-	99	74.809	Octodon_degus
ENSPTRG00000002265	RBM17	95	90.678	ENSONIG00000011838	rbm17	100	83.292	Oreochromis_niloticus
ENSPTRG00000002265	RBM17	100	96.526	ENSOANG00000015455	RBM17	100	96.526	Ornithorhynchus_anatinus
ENSPTRG00000002265	RBM17	94	100.000	ENSOCUG00000004516	-	74	100.000	Oryctolagus_cuniculus
ENSPTRG00000002265	RBM17	97	90.000	ENSORLG00000028798	rbm17	100	80.344	Oryzias_latipes
ENSPTRG00000002265	RBM17	98	90.164	ENSORLG00020004593	rbm17	100	78.960	Oryzias_latipes_hni
ENSPTRG00000002265	RBM17	97	90.000	ENSORLG00015000033	rbm17	100	83.292	Oryzias_latipes_hsok
ENSPTRG00000002265	RBM17	97	89.167	ENSOMEG00000012060	rbm17	100	88.050	Oryzias_melastigma
ENSPTRG00000002265	RBM17	100	98.025	ENSOGAG00000015687	RBM17	100	98.025	Otolemur_garnettii
ENSPTRG00000002265	RBM17	100	99.002	ENSOARG00000012975	RBM17	100	99.002	Ovis_aries
ENSPTRG00000002265	RBM17	100	100.000	ENSPPAG00000032347	RBM17	100	100.000	Pan_paniscus
ENSPTRG00000002265	RBM17	100	99.252	ENSPPRG00000010706	RBM17	100	99.252	Panthera_pardus
ENSPTRG00000002265	RBM17	100	99.252	ENSPTIG00000007596	RBM17	100	99.252	Panthera_tigris_altaica
ENSPTRG00000002265	RBM17	100	100.000	ENSPANG00000023425	RBM17	100	100.000	Papio_anubis
ENSPTRG00000002265	RBM17	94	88.793	ENSPKIG00000025526	rbm17	100	80.047	Paramormyrops_kingsleyae
ENSPTRG00000002265	RBM17	95	85.593	ENSPKIG00000005048	-	100	77.700	Paramormyrops_kingsleyae
ENSPTRG00000002265	RBM17	100	93.333	ENSPSIG00000012332	RBM17	100	93.333	Pelodiscus_sinensis
ENSPTRG00000002265	RBM17	94	90.517	ENSPMGG00000007980	rbm17	100	78.713	Periophthalmus_magnuspinnatus
ENSPTRG00000002265	RBM17	100	98.519	ENSPEMG00000014320	Rbm17	100	98.519	Peromyscus_maniculatus_bairdii
ENSPTRG00000002265	RBM17	100	97.767	ENSPCIG00000019260	-	100	97.767	Phascolarctos_cinereus
ENSPTRG00000002265	RBM17	97	88.333	ENSPFOG00000013271	rbm17	100	78.538	Poecilia_formosa
ENSPTRG00000002265	RBM17	97	88.333	ENSPLAG00000004455	rbm17	100	78.774	Poecilia_latipinna
ENSPTRG00000002265	RBM17	97	88.333	ENSPMEG00000014864	rbm17	100	81.818	Poecilia_mexicana
ENSPTRG00000002265	RBM17	98	86.066	ENSPREG00000015589	rbm17	100	77.830	Poecilia_reticulata
ENSPTRG00000002265	RBM17	81	71.517	ENSPPYG00000019042	-	100	71.207	Pongo_abelii
ENSPTRG00000002265	RBM17	99	72.180	ENSPPYG00000019881	-	100	71.930	Pongo_abelii
ENSPTRG00000002265	RBM17	100	100.000	ENSPPYG00000002067	RBM17	100	100.000	Pongo_abelii
ENSPTRG00000002265	RBM17	100	91.272	ENSPCAG00000016879	RBM17	100	91.272	Procavia_capensis
ENSPTRG00000002265	RBM17	100	99.002	ENSPCOG00000027881	RBM17	100	99.002	Propithecus_coquereli
ENSPTRG00000002265	RBM17	100	88.030	ENSPVAG00000015499	RBM17	100	86.534	Pteropus_vampyrus
ENSPTRG00000002265	RBM17	95	90.678	ENSPNYG00000015274	rbm17	100	76.559	Pundamilia_nyererei
ENSPTRG00000002265	RBM17	98	86.777	ENSPNAG00000030046	rbm17	100	79.294	Pygocentrus_nattereri
ENSPTRG00000002265	RBM17	100	98.519	ENSRNOG00000018767	Rbm17	100	98.519	Rattus_norvegicus
ENSPTRG00000002265	RBM17	100	100.000	ENSRBIG00000043727	RBM17	100	100.000	Rhinopithecus_bieti
ENSPTRG00000002265	RBM17	100	100.000	ENSRROG00000044142	RBM17	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000002265	RBM17	100	99.252	ENSSBOG00000031661	-	100	99.252	Saimiri_boliviensis_boliviensis
ENSPTRG00000002265	RBM17	100	88.308	ENSSBOG00000023653	-	100	88.308	Saimiri_boliviensis_boliviensis
ENSPTRG00000002265	RBM17	100	98.005	ENSSHAG00000012480	-	100	98.005	Sarcophilus_harrisii
ENSPTRG00000002265	RBM17	96	87.395	ENSSFOG00015009892	rbm17	100	82.555	Scleropages_formosus
ENSPTRG00000002265	RBM17	95	89.831	ENSSMAG00000012368	rbm17	100	77.861	Scophthalmus_maximus
ENSPTRG00000002265	RBM17	97	87.500	ENSSDUG00000015015	rbm17	100	81.840	Seriola_dumerili
ENSPTRG00000002265	RBM17	97	87.500	ENSSLDG00000014486	rbm17	100	81.840	Seriola_lalandi_dorsalis
ENSPTRG00000002265	RBM17	59	78.390	ENSSARG00000001792	-	100	78.390	Sorex_araneus
ENSPTRG00000002265	RBM17	99	94.763	ENSSPUG00000001036	RBM17	99	94.763	Sphenodon_punctatus
ENSPTRG00000002265	RBM17	97	87.500	ENSSPAG00000002338	rbm17	100	82.555	Stegastes_partitus
ENSPTRG00000002265	RBM17	100	98.753	ENSSSCG00000011134	RBM17	100	98.753	Sus_scrofa
ENSPTRG00000002265	RBM17	100	94.074	ENSTGUG00000002013	RBM17	100	94.074	Taeniopygia_guttata
ENSPTRG00000002265	RBM17	100	82.512	ENSTRUG00000010698	rbm17	100	82.512	Takifugu_rubripes
ENSPTRG00000002265	RBM17	98	86.066	ENSTNIG00000006892	rbm17	100	82.396	Tetraodon_nigroviridis
ENSPTRG00000002265	RBM17	100	77.556	ENSTBEG00000014686	RBM17	100	77.556	Tupaia_belangeri
ENSPTRG00000002265	RBM17	94	99.138	ENSTTRG00000001344	RBM17	100	98.889	Tursiops_truncatus
ENSPTRG00000002265	RBM17	100	95.250	ENSUAMG00000009499	RBM17	100	95.250	Ursus_americanus
ENSPTRG00000002265	RBM17	100	99.002	ENSUMAG00000012237	RBM17	100	99.002	Ursus_maritimus
ENSPTRG00000002265	RBM17	100	84.788	ENSVPAG00000005497	RBM17	100	84.788	Vicugna_pacos
ENSPTRG00000002265	RBM17	94	93.103	ENSVVUG00000019160	-	99	93.162	Vulpes_vulpes
ENSPTRG00000002265	RBM17	100	95.250	ENSVVUG00000006780	RBM17	97	98.555	Vulpes_vulpes
ENSPTRG00000002265	RBM17	99	85.821	ENSXETG00000018123	rbm17	100	85.821	Xenopus_tropicalis
ENSPTRG00000002265	RBM17	95	88.136	ENSXMAG00000008674	rbm17	100	81.081	Xiphophorus_maculatus