EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000002306 (Gene tree)
Gene ID: 736885
Gene Symbol: PRPF18
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 48191 bases
Position: chr10:13976080-14024270
Accession: 51988
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000003901	PRP4	PF08799.11	1.7e-13	1	1
ENSPTRP00000066354	PRP4	PF08799.11	1.8e-13	1	1
ENSPTRP00000003901	Prp18	PF02840.15	8.4e-63	1	1
ENSPTRP00000066354	Prp18	PF02840.15	1e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000088935	-	1373	XM_009457981	ENSPTRP00000066354	351 (aa)	XP_009456256	A0A2I3RNS8
ENSPTRT00000004225	-	1824	XM_001142416	ENSPTRP00000003901	342 (aa)	XP_001142416	H2Q1M8

Gene Model

Click here to download ENSPTRG00000002306's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000002306's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000002306	PRPF18	100	100.000	ENSG00000165630	PRPF18	100	100.000	Homo_sapiens
ENSPTRG00000002306	PRPF18	100	85.673	ENSAPOG00000024177	prpf18	100	85.673	Acanthochromis_polyacanthus
ENSPTRG00000002306	PRPF18	100	99.415	ENSAMEG00000013591	-	100	99.415	Ailuropoda_melanoleuca
ENSPTRG00000002306	PRPF18	100	84.503	ENSACIG00000001186	prpf18	100	84.503	Amphilophus_citrinellus
ENSPTRG00000002306	PRPF18	98	85.672	ENSAOCG00000006572	prpf18	94	83.965	Amphiprion_ocellaris
ENSPTRG00000002306	PRPF18	100	85.965	ENSAPEG00000004564	prpf18	100	85.965	Amphiprion_percula
ENSPTRG00000002306	PRPF18	100	84.503	ENSATEG00000000303	prpf18	100	84.503	Anabas_testudineus
ENSPTRG00000002306	PRPF18	99	91.471	ENSAPLG00000003387	-	99	91.471	Anas_platyrhynchos
ENSPTRG00000002306	PRPF18	100	91.860	ENSACAG00000000818	-	100	91.860	Anolis_carolinensis
ENSPTRG00000002306	PRPF18	100	99.430	ENSANAG00000037445	-	100	99.430	Aotus_nancymaae
ENSPTRG00000002306	PRPF18	100	85.088	ENSACLG00000026296	prpf18	100	85.088	Astatotilapia_calliptera
ENSPTRG00000002306	PRPF18	100	84.330	ENSAMXG00000012848	prpf18	100	84.330	Astyanax_mexicanus
ENSPTRG00000002306	PRPF18	100	99.145	ENSBTAG00000017244	PRPF18	100	99.145	Bos_taurus
ENSPTRG00000002306	PRPF18	98	38.506	WBGene00009320	F32B6.3	97	38.506	Caenorhabditis_elegans
ENSPTRG00000002306	PRPF18	100	99.430	ENSCJAG00000009432	-	100	99.430	Callithrix_jacchus
ENSPTRG00000002306	PRPF18	100	99.415	ENSCAFG00000004735	-	100	99.415	Canis_familiaris
ENSPTRG00000002306	PRPF18	100	99.415	ENSCAFG00020007712	-	100	99.415	Canis_lupus_dingo
ENSPTRG00000002306	PRPF18	100	99.145	ENSCHIG00000000499	-	100	99.145	Capra_hircus
ENSPTRG00000002306	PRPF18	100	99.145	ENSTSYG00000003517	-	100	99.145	Carlito_syrichta
ENSPTRG00000002306	PRPF18	100	100.000	ENSCPOG00000021069	-	100	100.000	Cavia_porcellus
ENSPTRG00000002306	PRPF18	100	99.430	ENSCCAG00000036822	-	100	99.430	Cebus_capucinus
ENSPTRG00000002306	PRPF18	100	88.889	ENSCATG00000016633	-	100	88.889	Cercocebus_atys
ENSPTRG00000002306	PRPF18	100	99.123	ENSCLAG00000011770	-	100	99.123	Chinchilla_lanigera
ENSPTRG00000002306	PRPF18	100	100.000	ENSCSAG00000013109	-	100	100.000	Chlorocebus_sabaeus
ENSPTRG00000002306	PRPF18	100	89.326	ENSCPBG00000003100	-	100	89.888	Chrysemys_picta_bellii
ENSPTRG00000002306	PRPF18	99	54.706	ENSCING00000020481	-	97	54.706	Ciona_intestinalis
ENSPTRG00000002306	PRPF18	99	54.335	ENSCSAVG00000010546	-	99	54.360	Ciona_savignyi
ENSPTRG00000002306	PRPF18	100	99.715	ENSCANG00000034900	-	100	99.715	Colobus_angolensis_palliatus
ENSPTRG00000002306	PRPF18	100	99.415	ENSCGRG00001023665	Prpf18	100	99.415	Cricetulus_griseus_chok1gshd
ENSPTRG00000002306	PRPF18	100	99.415	ENSCGRG00000014690	Prpf18	100	99.415	Cricetulus_griseus_crigri
ENSPTRG00000002306	PRPF18	100	83.041	ENSCSEG00000005536	prpf18	99	83.041	Cynoglossus_semilaevis
ENSPTRG00000002306	PRPF18	100	84.503	ENSCVAG00000012401	prpf18	100	84.503	Cyprinodon_variegatus
ENSPTRG00000002306	PRPF18	100	85.088	ENSDARG00000058306	prpf18	100	85.088	Danio_rerio
ENSPTRG00000002306	PRPF18	100	98.830	ENSDNOG00000035607	-	100	98.830	Dasypus_novemcinctus
ENSPTRG00000002306	PRPF18	100	99.123	ENSDORG00000000858	Prpf18	100	99.123	Dipodomys_ordii
ENSPTRG00000002306	PRPF18	99	51.622	FBgn0027784	Prp18	98	51.327	Drosophila_melanogaster
ENSPTRG00000002306	PRPF18	100	87.719	ENSETEG00000015060	-	100	87.719	Echinops_telfairi
ENSPTRG00000002306	PRPF18	100	66.571	ENSEBUG00000016502	prpf18	99	65.706	Eptatretus_burgeri
ENSPTRG00000002306	PRPF18	100	99.715	ENSEASG00005019373	-	100	99.715	Equus_asinus_asinus
ENSPTRG00000002306	PRPF18	100	99.715	ENSECAG00000006997	PRPF18	100	99.715	Equus_caballus
ENSPTRG00000002306	PRPF18	92	62.975	ENSEEUG00000001171	-	100	62.975	Erinaceus_europaeus
ENSPTRG00000002306	PRPF18	100	82.507	ENSELUG00000022190	prpf18	100	82.507	Esox_lucius
ENSPTRG00000002306	PRPF18	100	99.145	ENSFCAG00000004436	-	100	99.145	Felis_catus
ENSPTRG00000002306	PRPF18	93	91.385	ENSFALG00000001912	-	97	91.385	Ficedula_albicollis
ENSPTRG00000002306	PRPF18	99	64.638	ENSFDAG00000010713	-	97	64.638	Fukomys_damarensis
ENSPTRG00000002306	PRPF18	94	99.375	ENSFDAG00000014026	-	100	99.375	Fukomys_damarensis
ENSPTRG00000002306	PRPF18	80	89.377	ENSFHEG00000020125	prpf18	98	89.513	Fundulus_heteroclitus
ENSPTRG00000002306	PRPF18	99	80.059	ENSGMOG00000012210	prpf18	99	80.059	Gadus_morhua
ENSPTRG00000002306	PRPF18	100	92.398	ENSGALG00000043593	-	100	92.398	Gallus_gallus
ENSPTRG00000002306	PRPF18	100	83.333	ENSGAFG00000006034	prpf18	100	83.333	Gambusia_affinis
ENSPTRG00000002306	PRPF18	100	81.871	ENSGACG00000012232	prpf18	100	81.871	Gasterosteus_aculeatus
ENSPTRG00000002306	PRPF18	100	92.690	ENSGAGG00000016878	-	100	92.690	Gopherus_agassizii
ENSPTRG00000002306	PRPF18	93	100.000	ENSGGOG00000025188	-	96	100.000	Gorilla_gorilla
ENSPTRG00000002306	PRPF18	100	85.088	ENSHBUG00000010264	prpf18	100	85.088	Haplochromis_burtoni
ENSPTRG00000002306	PRPF18	100	99.415	ENSHGLG00000018534	PRPF18	100	99.415	Heterocephalus_glaber_female
ENSPTRG00000002306	PRPF18	94	99.688	ENSHGLG00100012161	-	98	99.688	Heterocephalus_glaber_male
ENSPTRG00000002306	PRPF18	100	84.503	ENSHCOG00000015987	prpf18	100	84.503	Hippocampus_comes
ENSPTRG00000002306	PRPF18	100	82.153	ENSIPUG00000007432	prpf18	100	83.003	Ictalurus_punctatus
ENSPTRG00000002306	PRPF18	100	98.246	ENSSTOG00000008735	-	100	98.246	Ictidomys_tridecemlineatus
ENSPTRG00000002306	PRPF18	100	72.622	ENSJJAG00000015191	-	100	72.622	Jaculus_jaculus
ENSPTRG00000002306	PRPF18	100	100.000	ENSJJAG00000024041	-	100	100.000	Jaculus_jaculus
ENSPTRG00000002306	PRPF18	100	83.333	ENSKMAG00000012124	prpf18	100	83.333	Kryptolebias_marmoratus
ENSPTRG00000002306	PRPF18	99	83.728	ENSLBEG00000028466	prpf18	99	83.728	Labrus_bergylta
ENSPTRG00000002306	PRPF18	100	86.842	ENSLACG00000009885	prpf18	100	86.842	Latimeria_chalumnae
ENSPTRG00000002306	PRPF18	100	90.643	ENSLOCG00000016736	prpf18	100	90.643	Lepisosteus_oculatus
ENSPTRG00000002306	PRPF18	100	100.000	ENSLAFG00000007753	-	100	100.000	Loxodonta_africana
ENSPTRG00000002306	PRPF18	100	100.000	ENSMFAG00000000540	-	100	100.000	Macaca_fascicularis
ENSPTRG00000002306	PRPF18	100	100.000	ENSMMUG00000015071	PRPF18	100	100.000	Macaca_mulatta
ENSPTRG00000002306	PRPF18	100	100.000	ENSMNEG00000024679	-	100	100.000	Macaca_nemestrina
ENSPTRG00000002306	PRPF18	100	84.795	ENSMLEG00000031715	-	100	84.795	Mandrillus_leucophaeus
ENSPTRG00000002306	PRPF18	100	83.626	ENSMAMG00000006610	prpf18	100	83.626	Mastacembelus_armatus
ENSPTRG00000002306	PRPF18	100	85.088	ENSMZEG00005019392	prpf18	100	85.088	Maylandia_zebra
ENSPTRG00000002306	PRPF18	100	92.398	ENSMGAG00000005023	-	100	92.398	Meleagris_gallopavo
ENSPTRG00000002306	PRPF18	100	99.715	ENSMICG00000006572	-	100	99.715	Microcebus_murinus
ENSPTRG00000002306	PRPF18	100	100.000	ENSMOCG00000021468	Prpf18	100	100.000	Microtus_ochrogaster
ENSPTRG00000002306	PRPF18	100	83.333	ENSMMOG00000013012	prpf18	100	83.333	Mola_mola
ENSPTRG00000002306	PRPF18	96	93.195	ENSMODG00000016902	-	92	93.195	Monodelphis_domestica
ENSPTRG00000002306	PRPF18	100	85.673	ENSMODG00000024043	-	100	85.673	Monodelphis_domestica
ENSPTRG00000002306	PRPF18	100	78.286	ENSMALG00000005486	prpf18	100	78.571	Monopterus_albus
ENSPTRG00000002306	PRPF18	100	99.415	MGP_CAROLIEiJ_G0023143	Prpf18	100	100.000	Mus_caroli
ENSPTRG00000002306	PRPF18	100	99.123	ENSMUSG00000039449	Prpf18	100	100.000	Mus_musculus
ENSPTRG00000002306	PRPF18	100	99.708	MGP_PahariEiJ_G0019203	Prpf18	100	100.000	Mus_pahari
ENSPTRG00000002306	PRPF18	100	98.830	MGP_SPRETEiJ_G0024061	Prpf18	100	100.000	Mus_spretus
ENSPTRG00000002306	PRPF18	100	99.123	ENSMPUG00000000938	-	100	99.123	Mustela_putorius_furo
ENSPTRG00000002306	PRPF18	100	99.123	ENSMLUG00000009200	-	100	99.123	Myotis_lucifugus
ENSPTRG00000002306	PRPF18	100	99.415	ENSNGAG00000012500	-	100	99.415	Nannospalax_galili
ENSPTRG00000002306	PRPF18	67	92.174	ENSNGAG00000023550	-	82	92.174	Nannospalax_galili
ENSPTRG00000002306	PRPF18	100	85.088	ENSNBRG00000001778	prpf18	100	85.088	Neolamprologus_brichardi
ENSPTRG00000002306	PRPF18	100	100.000	ENSNLEG00000012186	-	100	100.000	Nomascus_leucogenys
ENSPTRG00000002306	PRPF18	100	65.497	ENSMEUG00000005032	-	100	65.497	Notamacropus_eugenii
ENSPTRG00000002306	PRPF18	77	81.509	ENSOPRG00000002153	-	100	81.509	Ochotona_princeps
ENSPTRG00000002306	PRPF18	100	99.123	ENSODEG00000003770	-	100	99.123	Octodon_degus
ENSPTRG00000002306	PRPF18	98	84.478	ENSONIG00000014854	prpf18	96	84.478	Oreochromis_niloticus
ENSPTRG00000002306	PRPF18	100	94.737	ENSOANG00000015404	-	100	94.737	Ornithorhynchus_anatinus
ENSPTRG00000002306	PRPF18	100	99.708	ENSOCUG00000027756	-	100	95.614	Oryctolagus_cuniculus
ENSPTRG00000002306	PRPF18	100	82.906	ENSORLG00000010293	prpf18	100	82.906	Oryzias_latipes
ENSPTRG00000002306	PRPF18	100	84.503	ENSORLG00020001530	prpf18	100	84.503	Oryzias_latipes_hni
ENSPTRG00000002306	PRPF18	100	84.211	ENSORLG00015013705	prpf18	100	84.211	Oryzias_latipes_hsok
ENSPTRG00000002306	PRPF18	100	85.673	ENSOMEG00000009167	prpf18	100	85.673	Oryzias_melastigma
ENSPTRG00000002306	PRPF18	100	98.830	ENSOGAG00000007294	-	100	98.830	Otolemur_garnettii
ENSPTRG00000002306	PRPF18	100	99.145	ENSOARG00000006243	-	100	99.145	Ovis_aries
ENSPTRG00000002306	PRPF18	100	100.000	ENSPPAG00000041959	-	100	100.000	Pan_paniscus
ENSPTRG00000002306	PRPF18	100	99.123	ENSPPRG00000000107	-	100	99.123	Panthera_pardus
ENSPTRG00000002306	PRPF18	100	98.830	ENSPTIG00000021094	-	100	98.830	Panthera_tigris_altaica
ENSPTRG00000002306	PRPF18	100	99.715	ENSPANG00000023346	-	100	99.715	Papio_anubis
ENSPTRG00000002306	PRPF18	86	98.113	ENSPKIG00000014128	prpf18	96	83.191	Paramormyrops_kingsleyae
ENSPTRG00000002306	PRPF18	100	92.982	ENSPSIG00000016064	-	100	92.982	Pelodiscus_sinensis
ENSPTRG00000002306	PRPF18	100	78.655	ENSPMGG00000016486	prpf18	100	78.655	Periophthalmus_magnuspinnatus
ENSPTRG00000002306	PRPF18	100	99.708	ENSPEMG00000013704	Prpf18	100	99.708	Peromyscus_maniculatus_bairdii
ENSPTRG00000002306	PRPF18	100	74.277	ENSPMAG00000000204	prpf18	100	74.277	Petromyzon_marinus
ENSPTRG00000002306	PRPF18	93	96.615	ENSPCIG00000012963	-	99	96.835	Phascolarctos_cinereus
ENSPTRG00000002306	PRPF18	100	82.051	ENSPFOG00000017611	prpf18	100	82.051	Poecilia_formosa
ENSPTRG00000002306	PRPF18	100	83.626	ENSPLAG00000000369	prpf18	100	83.626	Poecilia_latipinna
ENSPTRG00000002306	PRPF18	100	83.626	ENSPMEG00000005183	prpf18	100	83.626	Poecilia_mexicana
ENSPTRG00000002306	PRPF18	100	83.041	ENSPREG00000015232	prpf18	100	83.041	Poecilia_reticulata
ENSPTRG00000002306	PRPF18	100	99.708	ENSPPYG00000002101	PRPF18	100	99.708	Pongo_abelii
ENSPTRG00000002306	PRPF18	100	80.994	ENSPCAG00000010833	-	100	80.994	Procavia_capensis
ENSPTRG00000002306	PRPF18	100	92.398	ENSPCOG00000013057	-	100	92.398	Propithecus_coquereli
ENSPTRG00000002306	PRPF18	100	61.404	ENSPVAG00000002947	-	100	61.404	Pteropus_vampyrus
ENSPTRG00000002306	PRPF18	100	85.088	ENSPNYG00000003554	prpf18	100	85.088	Pundamilia_nyererei
ENSPTRG00000002306	PRPF18	100	85.470	ENSPNAG00000023151	prpf18	100	85.470	Pygocentrus_nattereri
ENSPTRG00000002306	PRPF18	100	98.830	ENSRNOG00000018396	Prpf18	100	98.830	Rattus_norvegicus
ENSPTRG00000002306	PRPF18	100	99.430	ENSRBIG00000028028	-	100	99.430	Rhinopithecus_bieti
ENSPTRG00000002306	PRPF18	100	99.715	ENSRROG00000040695	-	100	99.715	Rhinopithecus_roxellana
ENSPTRG00000002306	PRPF18	100	99.430	ENSSBOG00000034482	-	100	99.430	Saimiri_boliviensis_boliviensis
ENSPTRG00000002306	PRPF18	100	77.485	ENSSHAG00000009669	-	100	77.485	Sarcophilus_harrisii
ENSPTRG00000002306	PRPF18	100	96.784	ENSSHAG00000016463	-	100	96.784	Sarcophilus_harrisii
ENSPTRG00000002306	PRPF18	77	44.528	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSPTRG00000002306	PRPF18	98	82.899	ENSSFOG00015022118	prpf18	100	76.945	Scleropages_formosus
ENSPTRG00000002306	PRPF18	100	83.333	ENSSMAG00000005308	prpf18	100	83.333	Scophthalmus_maximus
ENSPTRG00000002306	PRPF18	100	85.380	ENSSDUG00000015428	prpf18	100	85.380	Seriola_dumerili
ENSPTRG00000002306	PRPF18	100	85.380	ENSSLDG00000023989	prpf18	100	85.380	Seriola_lalandi_dorsalis
ENSPTRG00000002306	PRPF18	100	69.006	ENSSARG00000005307	-	100	69.006	Sorex_araneus
ENSPTRG00000002306	PRPF18	100	92.690	ENSSPUG00000002619	-	100	92.690	Sphenodon_punctatus
ENSPTRG00000002306	PRPF18	100	84.795	ENSSPAG00000019502	prpf18	100	84.795	Stegastes_partitus
ENSPTRG00000002306	PRPF18	100	99.430	ENSSSCG00000026354	-	100	99.430	Sus_scrofa
ENSPTRG00000002306	PRPF18	100	92.398	ENSTGUG00000002286	-	100	92.398	Taeniopygia_guttata
ENSPTRG00000002306	PRPF18	100	82.456	ENSTRUG00000011278	prpf18	100	82.456	Takifugu_rubripes
ENSPTRG00000002306	PRPF18	100	82.164	ENSTNIG00000000911	prpf18	100	82.164	Tetraodon_nigroviridis
ENSPTRG00000002306	PRPF18	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSPTRG00000002306	PRPF18	100	99.708	ENSTTRG00000011117	PRPF18	100	99.708	Tursiops_truncatus
ENSPTRG00000002306	PRPF18	95	96.308	ENSUAMG00000001815	-	94	96.308	Ursus_americanus
ENSPTRG00000002306	PRPF18	100	94.444	ENSUMAG00000012329	-	100	94.444	Ursus_maritimus
ENSPTRG00000002306	PRPF18	100	93.860	ENSVPAG00000011486	-	100	93.860	Vicugna_pacos
ENSPTRG00000002306	PRPF18	100	99.430	ENSVVUG00000005453	-	100	99.430	Vulpes_vulpes
ENSPTRG00000002306	PRPF18	100	80.580	ENSXETG00000024057	prpf18	100	80.580	Xenopus_tropicalis
ENSPTRG00000002306	PRPF18	100	82.849	ENSXCOG00000020414	prpf18	100	82.849	Xiphophorus_couchianus
ENSPTRG00000002306	PRPF18	100	83.333	ENSXMAG00000004713	prpf18	91	83.333	Xiphophorus_maculatus