EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000002318 (Gene tree)
Gene ID: -
Gene Symbol: RPP38
Alias: -
Full Name: ribonuclease P/MRP subunit p38
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 3558 bases
Position: chr10:15861671-15865228
Accession: 9777
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000003925	RNase_P_pop3	PF08228.11	4.2e-05	1	1
ENSPTRP00000003925	Ribosomal_L7Ae	PF01248.26	4.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000004253	-	1243	XM_016962707	ENSPTRP00000003925	311 (aa)	XP_016818196	H2Q1N6
ENSPTRT00000089885	-	540	-	ENSPTRP00000067137	179 (aa)	-	A0A2I3SLM5
ENSPTRT00000107290	-	438	-	ENSPTRP00000065661	145 (aa)	-	A0A2I3RLY6

Gene Model

Click here to download ENSPTRG00000002318's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03008	Ribosome biogenesis in eukaryotes	KEGG
ptr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000002318's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000002318	RPP38	91	98.587	ENSG00000152464	RPP38	100	99.405	Homo_sapiens
ENSPTRG00000002318	RPP38	86	44.526	ENSAPOG00000001240	rpp38	96	44.803	Acanthochromis_polyacanthus
ENSPTRG00000002318	RPP38	91	79.505	ENSAMEG00000018832	RPP38	100	79.505	Ailuropoda_melanoleuca
ENSPTRG00000002318	RPP38	80	43.284	ENSACIG00000011592	rpp38	92	43.446	Amphilophus_citrinellus
ENSPTRG00000002318	RPP38	86	44.056	ENSAOCG00000017293	rpp38	97	44.330	Amphiprion_ocellaris
ENSPTRG00000002318	RPP38	86	46.154	ENSAPEG00000002315	rpp38	96	46.403	Amphiprion_percula
ENSPTRG00000002318	RPP38	87	43.525	ENSATEG00000000731	rpp38	98	43.525	Anabas_testudineus
ENSPTRG00000002318	RPP38	83	51.698	ENSAPLG00000002054	RPP38	96	52.708	Anas_platyrhynchos
ENSPTRG00000002318	RPP38	86	42.857	ENSACLG00000016962	rpp38	99	43.310	Astatotilapia_calliptera
ENSPTRG00000002318	RPP38	86	43.728	ENSACLG00000016958	rpp38	99	43.662	Astatotilapia_calliptera
ENSPTRG00000002318	RPP38	81	44.841	ENSAMXG00000025023	rpp38	98	44.765	Astyanax_mexicanus
ENSPTRG00000002318	RPP38	91	73.145	ENSBTAG00000007702	RPP38	100	73.145	Bos_taurus
ENSPTRG00000002318	RPP38	91	75.265	ENSCAFG00000024373	RPP38	100	75.265	Canis_familiaris
ENSPTRG00000002318	RPP38	91	75.265	ENSCAFG00020008008	RPP38	100	75.265	Canis_lupus_dingo
ENSPTRG00000002318	RPP38	91	73.852	ENSCHIG00000012484	RPP38	100	73.852	Capra_hircus
ENSPTRG00000002318	RPP38	90	76.512	ENSCPOG00000003981	RPP38	99	76.512	Cavia_porcellus
ENSPTRG00000002318	RPP38	91	77.113	ENSCLAG00000010194	RPP38	100	77.113	Chinchilla_lanigera
ENSPTRG00000002318	RPP38	91	93.286	ENSCSAG00000019055	RPP38	100	93.286	Chlorocebus_sabaeus
ENSPTRG00000002318	RPP38	91	83.451	ENSCHOG00000004335	RPP38	100	83.451	Choloepus_hoffmanni
ENSPTRG00000002318	RPP38	91	74.035	ENSCGRG00001001395	Rpp38	100	75.789	Cricetulus_griseus_chok1gshd
ENSPTRG00000002318	RPP38	91	74.035	ENSCGRG00000017441	Rpp38	100	75.789	Cricetulus_griseus_crigri
ENSPTRG00000002318	RPP38	86	40.502	ENSCSEG00000001721	rpp38	99	40.767	Cynoglossus_semilaevis
ENSPTRG00000002318	RPP38	86	42.509	ENSCVAG00000001676	rpp38	97	42.808	Cyprinodon_variegatus
ENSPTRG00000002318	RPP38	82	46.094	ENSDARG00000040350	rpp38	96	45.387	Danio_rerio
ENSPTRG00000002318	RPP38	91	79.859	ENSDNOG00000040314	RPP38	100	79.859	Dasypus_novemcinctus
ENSPTRG00000002318	RPP38	91	69.014	ENSDORG00000009783	Rpp38	100	69.014	Dipodomys_ordii
ENSPTRG00000002318	RPP38	91	75.000	ENSETEG00000002839	RPP38	100	75.000	Echinops_telfairi
ENSPTRG00000002318	RPP38	90	79.211	ENSEASG00005019783	RPP38	98	79.211	Equus_asinus_asinus
ENSPTRG00000002318	RPP38	90	72.760	ENSEEUG00000014677	RPP38	99	72.760	Erinaceus_europaeus
ENSPTRG00000002318	RPP38	80	43.478	ENSELUG00000010160	rpp38	94	44.056	Esox_lucius
ENSPTRG00000002318	RPP38	91	75.265	ENSFCAG00000022449	RPP38	100	75.265	Felis_catus
ENSPTRG00000002318	RPP38	83	51.852	ENSFALG00000014804	RPP38	94	52.837	Ficedula_albicollis
ENSPTRG00000002318	RPP38	90	78.648	ENSFDAG00000018669	RPP38	99	78.648	Fukomys_damarensis
ENSPTRG00000002318	RPP38	86	41.489	ENSFHEG00000013741	rpp38	100	43.522	Fundulus_heteroclitus
ENSPTRG00000002318	RPP38	94	47.541	ENSGALG00000008794	RPP38	92	52.158	Gallus_gallus
ENSPTRG00000002318	RPP38	53	48.503	ENSGACG00000009258	rpp38	97	47.561	Gasterosteus_aculeatus
ENSPTRG00000002318	RPP38	86	43.223	ENSHBUG00000010937	rpp38	97	43.525	Haplochromis_burtoni
ENSPTRG00000002318	RPP38	90	76.786	ENSHGLG00000012144	RPP38	99	76.786	Heterocephalus_glaber_female
ENSPTRG00000002318	RPP38	80	41.600	ENSIPUG00000022879	rpp38	99	41.935	Ictalurus_punctatus
ENSPTRG00000002318	RPP38	92	77.622	ENSSTOG00000025699	RPP38	99	77.622	Ictidomys_tridecemlineatus
ENSPTRG00000002318	RPP38	91	76.140	ENSJJAG00000007523	Rpp38	100	75.789	Jaculus_jaculus
ENSPTRG00000002318	RPP38	80	43.295	ENSKMAG00000003986	rpp38	89	43.609	Kryptolebias_marmoratus
ENSPTRG00000002318	RPP38	84	44.322	ENSLBEG00000006853	rpp38	94	45.055	Labrus_bergylta
ENSPTRG00000002318	RPP38	86	52.098	ENSLACG00000006502	RPP38	100	52.000	Latimeria_chalumnae
ENSPTRG00000002318	RPP38	86	49.275	ENSLOCG00000018347	rpp38	94	48.921	Lepisosteus_oculatus
ENSPTRG00000002318	RPP38	91	80.986	ENSLAFG00000000509	RPP38	100	80.634	Loxodonta_africana
ENSPTRG00000002318	RPP38	91	92.933	ENSMMUG00000007679	RPP38	100	92.933	Macaca_mulatta
ENSPTRG00000002318	RPP38	87	45.196	ENSMAMG00000012774	rpp38	96	45.000	Mastacembelus_armatus
ENSPTRG00000002318	RPP38	86	43.223	ENSMZEG00005003189	rpp38	97	43.525	Maylandia_zebra
ENSPTRG00000002318	RPP38	86	43.728	ENSMZEG00005003200	rpp38	99	43.662	Maylandia_zebra
ENSPTRG00000002318	RPP38	84	52.256	ENSMGAG00000008217	RPP38	92	52.899	Meleagris_gallopavo
ENSPTRG00000002318	RPP38	91	73.333	ENSMAUG00000003644	Rpp38	100	75.088	Mesocricetus_auratus
ENSPTRG00000002318	RPP38	91	76.491	ENSMOCG00000007020	Rpp38	100	76.140	Microtus_ochrogaster
ENSPTRG00000002318	RPP38	85	42.143	ENSMMOG00000003446	rpp38	94	42.545	Mola_mola
ENSPTRG00000002318	RPP38	86	66.790	ENSMODG00000024091	RPP38	100	66.316	Monodelphis_domestica
ENSPTRG00000002318	RPP38	83	41.887	ENSMALG00000002356	rpp38	93	41.887	Monopterus_albus
ENSPTRG00000002318	RPP38	91	76.140	MGP_CAROLIEiJ_G0023133	Rpp38	100	76.140	Mus_caroli
ENSPTRG00000002318	RPP38	91	75.789	ENSMUSG00000049950	Rpp38	100	75.789	Mus_musculus
ENSPTRG00000002318	RPP38	91	76.842	MGP_PahariEiJ_G0019193	Rpp38	100	76.842	Mus_pahari
ENSPTRG00000002318	RPP38	91	75.088	MGP_SPRETEiJ_G0024051	Rpp38	100	75.088	Mus_spretus
ENSPTRG00000002318	RPP38	90	76.512	ENSMPUG00000018523	RPP38	99	76.512	Mustela_putorius_furo
ENSPTRG00000002318	RPP38	85	81.509	ENSMLUG00000002153	RPP38	100	81.625	Myotis_lucifugus
ENSPTRG00000002318	RPP38	91	76.140	ENSNGAG00000011066	Rpp38	100	76.140	Nannospalax_galili
ENSPTRG00000002318	RPP38	86	43.728	ENSNBRG00000006994	rpp38	98	42.806	Neolamprologus_brichardi
ENSPTRG00000002318	RPP38	86	43.369	ENSONIG00000020467	rpp38	96	43.011	Oreochromis_niloticus
ENSPTRG00000002318	RPP38	85	76.316	ENSOCUG00000022768	-	100	76.408	Oryctolagus_cuniculus
ENSPTRG00000002318	RPP38	85	75.188	ENSOCUG00000024367	-	100	75.352	Oryctolagus_cuniculus
ENSPTRG00000002318	RPP38	80	41.509	ENSORLG00000009219	rpp38	96	40.357	Oryzias_latipes
ENSPTRG00000002318	RPP38	80	42.803	ENSORLG00020011503	rpp38	90	41.264	Oryzias_latipes_hni
ENSPTRG00000002318	RPP38	90	38.176	ENSORLG00015017702	rpp38	99	37.874	Oryzias_latipes_hsok
ENSPTRG00000002318	RPP38	80	41.860	ENSOMEG00000005414	rpp38	99	40.136	Oryzias_melastigma
ENSPTRG00000002318	RPP38	91	81.979	ENSOGAG00000008059	RPP38	100	81.979	Otolemur_garnettii
ENSPTRG00000002318	RPP38	91	74.558	ENSOARG00000004534	RPP38	100	74.558	Ovis_aries
ENSPTRG00000002318	RPP38	100	99.678	ENSPPAG00000041577	RPP38	100	99.678	Pan_paniscus
ENSPTRG00000002318	RPP38	91	75.265	ENSPPRG00000015329	RPP38	100	75.265	Panthera_pardus
ENSPTRG00000002318	RPP38	91	74.912	ENSPTIG00000007188	RPP38	100	74.912	Panthera_tigris_altaica
ENSPTRG00000002318	RPP38	84	44.604	ENSPKIG00000025652	rpp38	93	44.803	Paramormyrops_kingsleyae
ENSPTRG00000002318	RPP38	88	58.065	ENSPSIG00000001527	RPP38	98	57.895	Pelodiscus_sinensis
ENSPTRG00000002318	RPP38	91	76.491	ENSPEMG00000008375	Rpp38	100	77.895	Peromyscus_maniculatus_bairdii
ENSPTRG00000002318	RPP38	92	68.293	ENSPCIG00000009096	RPP38	95	67.944	Phascolarctos_cinereus
ENSPTRG00000002318	RPP38	55	46.196	ENSPFOG00000016823	rpp38	82	46.196	Poecilia_formosa
ENSPTRG00000002318	RPP38	81	41.221	ENSPLAG00000007626	rpp38	98	41.608	Poecilia_latipinna
ENSPTRG00000002318	RPP38	79	38.911	ENSPMEG00000020392	rpp38	93	38.889	Poecilia_mexicana
ENSPTRG00000002318	RPP38	88	41.404	ENSPREG00000017744	rpp38	97	41.053	Poecilia_reticulata
ENSPTRG00000002318	RPP38	91	98.233	ENSPPYG00000002113	RPP38	100	98.233	Pongo_abelii
ENSPTRG00000002318	RPP38	85	79.245	ENSPVAG00000007155	RPP38	100	79.505	Pteropus_vampyrus
ENSPTRG00000002318	RPP38	86	43.223	ENSPNYG00000004293	rpp38	97	43.525	Pundamilia_nyererei
ENSPTRG00000002318	RPP38	80	43.137	ENSPNAG00000010633	rpp38	99	43.885	Pygocentrus_nattereri
ENSPTRG00000002318	RPP38	89	73.477	ENSRNOG00000038025	Rpp38	99	73.477	Rattus_norvegicus
ENSPTRG00000002318	RPP38	91	68.772	ENSSHAG00000015529	RPP38	99	69.258	Sarcophilus_harrisii
ENSPTRG00000002318	RPP38	86	43.116	ENSSMAG00000018276	rpp38	95	43.116	Scophthalmus_maximus
ENSPTRG00000002318	RPP38	86	42.545	ENSSDUG00000001651	rpp38	98	44.170	Seriola_dumerili
ENSPTRG00000002318	RPP38	86	42.545	ENSSLDG00000014355	rpp38	98	42.857	Seriola_lalandi_dorsalis
ENSPTRG00000002318	RPP38	91	56.890	ENSSARG00000012099	RPP38	100	56.537	Sorex_araneus
ENSPTRG00000002318	RPP38	87	54.710	ENSSPUG00000008560	-	97	54.348	Sphenodon_punctatus
ENSPTRG00000002318	RPP38	90	57.692	ENSSPUG00000018363	-	99	57.343	Sphenodon_punctatus
ENSPTRG00000002318	RPP38	91	58.333	ENSSPUG00000005237	-	100	57.986	Sphenodon_punctatus
ENSPTRG00000002318	RPP38	86	45.055	ENSSPAG00000020387	rpp38	96	45.324	Stegastes_partitus
ENSPTRG00000002318	RPP38	91	72.028	ENSSSCG00000027110	RPP38	100	72.028	Sus_scrofa
ENSPTRG00000002318	RPP38	83	50.000	ENSTGUG00000001366	RPP38	97	51.064	Taeniopygia_guttata
ENSPTRG00000002318	RPP38	86	43.772	ENSTNIG00000001334	rpp38	96	43.772	Tetraodon_nigroviridis
ENSPTRG00000002318	RPP38	91	73.498	ENSTTRG00000004420	RPP38	100	73.498	Tursiops_truncatus
ENSPTRG00000002318	RPP38	91	79.152	ENSUAMG00000002618	RPP38	100	79.152	Ursus_americanus
ENSPTRG00000002318	RPP38	91	77.817	ENSUMAG00000012382	RPP38	100	78.873	Ursus_maritimus
ENSPTRG00000002318	RPP38	91	74.912	ENSVVUG00000005272	RPP38	100	74.912	Vulpes_vulpes
ENSPTRG00000002318	RPP38	84	48.162	ENSXETG00000003419	rpp38	97	48.582	Xenopus_tropicalis