EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000002441 (Gene tree)
Gene ID: -
Gene Symbol: BMS1
Alias: -
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 61099 bases
Position: chr10:44568634-44629732
Accession: 3816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000065495	AARP2CN	PF08142.12	2.5e-31	1	1
ENSPTRP00000070735	AARP2CN	PF08142.12	2.6e-31	1	1
ENSPTRP00000050689	AARP2CN	PF08142.12	2.6e-31	1	1
ENSPTRP00000088208	AARP2CN	PF08142.12	2.6e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000104381	-	3852	-	ENSPTRP00000070735	1283 (aa)	-	A0A2I3S1M1
ENSPTRT00000105709	-	3441	-	ENSPTRP00000088208	1146 (aa)	-	A0A2I3TG68
ENSPTRT00000095356	-	1257	-	ENSPTRP00000078249	418 (aa)	-	A0A2I3SMI5
ENSPTRT00000078859	-	3795	-	ENSPTRP00000065495	1264 (aa)	-	A0A2I3RLC3
ENSPTRT00000004533	-	4658	XM_001155329	ENSPTRP00000050689	1282 (aa)	XP_001155329	H2R7Q8

Gene Model

Click here to download ENSPTRG00000002441's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000002441's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000002441	BMS1	100	99.532	ENSG00000165733	BMS1	100	99.532	Homo_sapiens
ENSPTRG00000002441	BMS1	71	71.626	ENSAPOG00000002296	bms1	97	66.313	Acanthochromis_polyacanthus
ENSPTRG00000002441	BMS1	99	89.899	ENSAMEG00000016834	BMS1	99	90.054	Ailuropoda_melanoleuca
ENSPTRG00000002441	BMS1	86	69.206	ENSACIG00000002588	bms1	85	77.250	Amphilophus_citrinellus
ENSPTRG00000002441	BMS1	83	70.323	ENSAOCG00000018088	bms1	54	66.411	Amphiprion_ocellaris
ENSPTRG00000002441	BMS1	81	71.854	ENSAPEG00000014673	bms1	54	66.104	Amphiprion_percula
ENSPTRG00000002441	BMS1	88	69.551	ENSATEG00000023465	bms1	52	69.036	Anabas_testudineus
ENSPTRG00000002441	BMS1	99	69.270	ENSAPLG00000003759	BMS1	100	72.236	Anas_platyrhynchos
ENSPTRG00000002441	BMS1	99	70.276	ENSACAG00000004537	-	99	69.985	Anolis_carolinensis
ENSPTRG00000002441	BMS1	100	95.019	ENSANAG00000023432	BMS1	100	94.786	Aotus_nancymaae
ENSPTRG00000002441	BMS1	87	68.730	ENSACLG00000001294	bms1	99	61.562	Astatotilapia_calliptera
ENSPTRG00000002441	BMS1	82	72.874	ENSAMXG00000011236	bms1	51	66.199	Astyanax_mexicanus
ENSPTRG00000002441	BMS1	100	89.252	ENSBTAG00000012878	BMS1	100	89.330	Bos_taurus
ENSPTRG00000002441	BMS1	81	52.567	WBGene00022021	Y61A9LA.10	99	51.887	Caenorhabditis_elegans
ENSPTRG00000002441	BMS1	100	95.331	ENSCJAG00000021705	BMS1	100	95.175	Callithrix_jacchus
ENSPTRG00000002441	BMS1	99	90.101	ENSCAFG00000007114	BMS1	99	89.400	Canis_familiaris
ENSPTRG00000002441	BMS1	99	90.101	ENSCAFG00020025282	BMS1	99	89.400	Canis_lupus_dingo
ENSPTRG00000002441	BMS1	100	88.802	ENSCHIG00000023251	BMS1	100	88.880	Capra_hircus
ENSPTRG00000002441	BMS1	99	83.756	ENSCAPG00000008652	BMS1	99	83.043	Cavia_aperea
ENSPTRG00000002441	BMS1	99	86.719	ENSCPOG00000000502	BMS1	99	86.016	Cavia_porcellus
ENSPTRG00000002441	BMS1	100	79.595	ENSCCAG00000024969	-	100	79.439	Cebus_capucinus
ENSPTRG00000002441	BMS1	99	71.267	ENSCATG00000008695	-	97	73.281	Cercocebus_atys
ENSPTRG00000002441	BMS1	100	97.350	ENSCATG00000030625	-	100	97.350	Cercocebus_atys
ENSPTRG00000002441	BMS1	99	86.953	ENSCLAG00000002446	BMS1	99	86.406	Chinchilla_lanigera
ENSPTRG00000002441	BMS1	100	97.584	ENSCSAG00000011118	BMS1	100	97.584	Chlorocebus_sabaeus
ENSPTRG00000002441	BMS1	100	87.267	ENSCHOG00000011055	BMS1	100	87.267	Choloepus_hoffmanni
ENSPTRG00000002441	BMS1	99	74.502	ENSCPBG00000025581	BMS1	99	73.024	Chrysemys_picta_bellii
ENSPTRG00000002441	BMS1	78	58.738	ENSCING00000003181	-	99	58.738	Ciona_intestinalis
ENSPTRG00000002441	BMS1	67	55.769	ENSCSAVG00000004113	-	82	61.128	Ciona_savignyi
ENSPTRG00000002441	BMS1	100	97.428	ENSCANG00000011609	BMS1	100	97.428	Colobus_angolensis_palliatus
ENSPTRG00000002441	BMS1	99	87.471	ENSCGRG00001019461	Bms1	99	86.392	Cricetulus_griseus_chok1gshd
ENSPTRG00000002441	BMS1	99	87.403	ENSCGRG00000009016	Bms1	99	86.392	Cricetulus_griseus_crigri
ENSPTRG00000002441	BMS1	82	73.474	ENSCSEG00000002469	bms1	50	68.910	Cynoglossus_semilaevis
ENSPTRG00000002441	BMS1	80	75.121	ENSCVAG00000008371	bms1	97	68.364	Cyprinodon_variegatus
ENSPTRG00000002441	BMS1	88	67.512	ENSDARG00000054154	bms1	99	61.270	Danio_rerio
ENSPTRG00000002441	BMS1	100	89.474	ENSDNOG00000015761	BMS1	100	89.009	Dasypus_novemcinctus
ENSPTRG00000002441	BMS1	99	87.832	ENSDORG00000002982	Bms1	99	87.832	Dipodomys_ordii
ENSPTRG00000002441	BMS1	79	57.985	FBgn0036686	CG7728	92	58.435	Drosophila_melanogaster
ENSPTRG00000002441	BMS1	91	85.714	ENSETEG00000009554	BMS1	91	83.929	Echinops_telfairi
ENSPTRG00000002441	BMS1	99	89.494	ENSEASG00005006894	BMS1	99	89.883	Equus_asinus_asinus
ENSPTRG00000002441	BMS1	99	90.195	ENSECAG00000001358	BMS1	99	89.805	Equus_caballus
ENSPTRG00000002441	BMS1	89	66.414	ENSELUG00000001756	bms1	95	66.165	Esox_lucius
ENSPTRG00000002441	BMS1	99	90.016	ENSFCAG00000011220	BMS1	99	90.257	Felis_catus
ENSPTRG00000002441	BMS1	99	69.797	ENSFALG00000006882	BMS1	99	71.091	Ficedula_albicollis
ENSPTRG00000002441	BMS1	99	85.469	ENSFDAG00000001422	BMS1	99	84.988	Fukomys_damarensis
ENSPTRG00000002441	BMS1	85	69.368	ENSFHEG00000003367	bms1	97	67.630	Fundulus_heteroclitus
ENSPTRG00000002441	BMS1	88	65.913	ENSGMOG00000000718	bms1	99	63.851	Gadus_morhua
ENSPTRG00000002441	BMS1	99	71.681	ENSGALG00000002624	BMS1	99	72.244	Gallus_gallus
ENSPTRG00000002441	BMS1	99	59.784	ENSGACG00000015334	bms1	88	66.613	Gasterosteus_aculeatus
ENSPTRG00000002441	BMS1	99	74.317	ENSGAGG00000003467	BMS1	99	73.359	Gopherus_agassizii
ENSPTRG00000002441	BMS1	87	68.730	ENSHBUG00000022628	bms1	99	61.533	Haplochromis_burtoni
ENSPTRG00000002441	BMS1	99	86.105	ENSHGLG00000000477	BMS1	99	84.609	Heterocephalus_glaber_female
ENSPTRG00000002441	BMS1	99	86.183	ENSHGLG00100002176	BMS1	99	84.688	Heterocephalus_glaber_male
ENSPTRG00000002441	BMS1	89	68.019	ENSHCOG00000017604	bms1	98	66.538	Hippocampus_comes
ENSPTRG00000002441	BMS1	55	63.738	ENSIPUG00000017855	bms1	99	60.866	Ictalurus_punctatus
ENSPTRG00000002441	BMS1	99	88.984	ENSSTOG00000015063	BMS1	99	88.672	Ictidomys_tridecemlineatus
ENSPTRG00000002441	BMS1	99	87.021	ENSJJAG00000017328	Bms1	99	86.630	Jaculus_jaculus
ENSPTRG00000002441	BMS1	65	63.717	ENSKMAG00000021982	bms1	91	66.798	Kryptolebias_marmoratus
ENSPTRG00000002441	BMS1	82	70.843	ENSLBEG00000028208	bms1	97	66.667	Labrus_bergylta
ENSPTRG00000002441	BMS1	99	61.835	ENSLACG00000001600	BMS1	100	61.141	Latimeria_chalumnae
ENSPTRG00000002441	BMS1	82	75.057	ENSLOCG00000012914	bms1	99	63.052	Lepisosteus_oculatus
ENSPTRG00000002441	BMS1	99	87.773	ENSLAFG00000006250	BMS1	99	87.617	Loxodonta_africana
ENSPTRG00000002441	BMS1	84	97.243	ENSMFAG00000037771	BMS1	100	97.243	Macaca_fascicularis
ENSPTRG00000002441	BMS1	99	80.994	ENSMMUG00000007426	-	99	82.699	Macaca_mulatta
ENSPTRG00000002441	BMS1	93	75.162	ENSMLEG00000029084	-	97	77.624	Mandrillus_leucophaeus
ENSPTRG00000002441	BMS1	99	59.612	ENSMAMG00000020855	bms1	90	71.005	Mastacembelus_armatus
ENSPTRG00000002441	BMS1	87	68.730	ENSMZEG00005005663	bms1	99	61.562	Maylandia_zebra
ENSPTRG00000002441	BMS1	95	71.659	ENSMGAG00000001170	BMS1	99	71.809	Meleagris_gallopavo
ENSPTRG00000002441	BMS1	99	86.781	ENSMAUG00000002195	Bms1	99	86.102	Mesocricetus_auratus
ENSPTRG00000002441	BMS1	100	89.604	ENSMICG00000009977	BMS1	100	89.294	Microcebus_murinus
ENSPTRG00000002441	BMS1	99	85.113	ENSMOCG00000002038	Bms1	99	85.113	Microtus_ochrogaster
ENSPTRG00000002441	BMS1	85	67.747	ENSMMOG00000000977	bms1	97	65.759	Mola_mola
ENSPTRG00000002441	BMS1	99	78.127	ENSMODG00000001177	BMS1	99	78.511	Monodelphis_domestica
ENSPTRG00000002441	BMS1	96	63.636	ENSMALG00000009680	bms1	99	60.077	Monopterus_albus
ENSPTRG00000002441	BMS1	79	90.476	MGP_CAROLIEiJ_G0028785	-	86	95.146	Mus_caroli
ENSPTRG00000002441	BMS1	99	84.837	ENSMUSG00000030138	Bms1	99	85.082	Mus_musculus
ENSPTRG00000002441	BMS1	99	85.125	MGP_PahariEiJ_G0022539	Bms1	99	85.214	Mus_pahari
ENSPTRG00000002441	BMS1	99	85.226	MGP_SPRETEiJ_G0029816	Bms1	99	84.926	Mus_spretus
ENSPTRG00000002441	BMS1	99	90.647	ENSMPUG00000017276	BMS1	99	90.265	Mustela_putorius_furo
ENSPTRG00000002441	BMS1	100	88.889	ENSMLUG00000003260	BMS1	100	88.190	Myotis_lucifugus
ENSPTRG00000002441	BMS1	95	84.391	ENSNGAG00000015258	Bms1	96	85.810	Nannospalax_galili
ENSPTRG00000002441	BMS1	100	96.571	ENSNLEG00000015791	BMS1	100	96.571	Nomascus_leucogenys
ENSPTRG00000002441	BMS1	80	95.933	ENSOPRG00000005195	BMS1	81	95.933	Ochotona_princeps
ENSPTRG00000002441	BMS1	99	85.859	ENSODEG00000005554	BMS1	99	85.078	Octodon_degus
ENSPTRG00000002441	BMS1	89	69.108	ENSONIG00000007227	bms1	99	61.485	Oreochromis_niloticus
ENSPTRG00000002441	BMS1	99	76.457	ENSOANG00000000662	-	99	76.224	Ornithorhynchus_anatinus
ENSPTRG00000002441	BMS1	99	87.969	ENSOCUG00000005354	BMS1	99	87.969	Oryctolagus_cuniculus
ENSPTRG00000002441	BMS1	87	68.775	ENSORLG00000014655	bms1	98	68.164	Oryzias_latipes
ENSPTRG00000002441	BMS1	82	74.074	ENSORLG00020016246	bms1	92	69.044	Oryzias_latipes_hni
ENSPTRG00000002441	BMS1	82	73.423	ENSORLG00015014183	bms1	92	68.882	Oryzias_latipes_hsok
ENSPTRG00000002441	BMS1	87	68.960	ENSOMEG00000015042	bms1	96	67.492	Oryzias_melastigma
ENSPTRG00000002441	BMS1	99	90.225	ENSOGAG00000006511	BMS1	99	89.449	Otolemur_garnettii
ENSPTRG00000002441	BMS1	100	88.682	ENSOARG00000003900	BMS1	100	88.760	Ovis_aries
ENSPTRG00000002441	BMS1	100	96.181	ENSPPAG00000027837	BMS1	100	96.181	Pan_paniscus
ENSPTRG00000002441	BMS1	99	90.156	ENSPPRG00000001311	BMS1	99	90.398	Panthera_pardus
ENSPTRG00000002441	BMS1	99	87.978	ENSPTIG00000009652	BMS1	99	88.222	Panthera_tigris_altaica
ENSPTRG00000002441	BMS1	99	71.047	ENSPSIG00000006481	BMS1	99	72.573	Pelodiscus_sinensis
ENSPTRG00000002441	BMS1	99	79.635	ENSPEMG00000022467	Bms1	99	80.206	Peromyscus_maniculatus_bairdii
ENSPTRG00000002441	BMS1	95	93.289	ENSPCIG00000001339	BMS1	99	86.761	Phascolarctos_cinereus
ENSPTRG00000002441	BMS1	80	74.138	ENSPFOG00000015180	bms1	96	66.561	Poecilia_formosa
ENSPTRG00000002441	BMS1	80	74.384	ENSPMEG00000023176	bms1	91	66.561	Poecilia_mexicana
ENSPTRG00000002441	BMS1	85	67.633	ENSPREG00000002695	bms1	95	67.195	Poecilia_reticulata
ENSPTRG00000002441	BMS1	68	98.198	ENSPPYG00000002836	-	99	98.198	Pongo_abelii
ENSPTRG00000002441	BMS1	73	93.878	ENSPCAG00000014528	BMS1	73	93.878	Procavia_capensis
ENSPTRG00000002441	BMS1	95	85.981	ENSPCOG00000023834	-	99	85.656	Propithecus_coquereli
ENSPTRG00000002441	BMS1	100	87.004	ENSPVAG00000000725	BMS1	100	87.305	Pteropus_vampyrus
ENSPTRG00000002441	BMS1	97	62.697	ENSPNYG00000018866	bms1	87	66.667	Pundamilia_nyererei
ENSPTRG00000002441	BMS1	90	79.548	ENSRNOG00000006576	Bms1	100	83.476	Rattus_norvegicus
ENSPTRG00000002441	BMS1	100	95.479	ENSRROG00000040101	BMS1	100	95.479	Rhinopithecus_roxellana
ENSPTRG00000002441	BMS1	73	45.200	YPL217C	-	81	47.174	Saccharomyces_cerevisiae
ENSPTRG00000002441	BMS1	100	95.331	ENSSBOG00000035778	BMS1	100	95.409	Saimiri_boliviensis_boliviensis
ENSPTRG00000002441	BMS1	99	77.991	ENSSHAG00000005062	BMS1	99	78.374	Sarcophilus_harrisii
ENSPTRG00000002441	BMS1	99	62.162	ENSSFOG00015022313	bms1	99	60.890	Scleropages_formosus
ENSPTRG00000002441	BMS1	89	69.305	ENSSDUG00000016875	bms1	90	58.143	Seriola_dumerili
ENSPTRG00000002441	BMS1	83	70.065	ENSSLDG00000015199	bms1	53	67.228	Seriola_lalandi_dorsalis
ENSPTRG00000002441	BMS1	76	74.327	ENSSARG00000014407	BMS1	100	75.727	Sorex_araneus
ENSPTRG00000002441	BMS1	99	72.874	ENSSPUG00000014454	BMS1	99	73.053	Sphenodon_punctatus
ENSPTRG00000002441	BMS1	99	89.478	ENSSSCG00000010198	BMS1	99	89.634	Sus_scrofa
ENSPTRG00000002441	BMS1	99	70.958	ENSTGUG00000006302	-	99	71.155	Taeniopygia_guttata
ENSPTRG00000002441	BMS1	86	65.161	ENSTRUG00000008028	bms1	97	64.173	Takifugu_rubripes
ENSPTRG00000002441	BMS1	99	59.845	ENSTNIG00000006216	bms1	90	65.506	Tetraodon_nigroviridis
ENSPTRG00000002441	BMS1	61	93.846	ENSTBEG00000001673	-	63	93.846	Tupaia_belangeri
ENSPTRG00000002441	BMS1	100	87.607	ENSTTRG00000007983	BMS1	100	86.984	Tursiops_truncatus
ENSPTRG00000002441	BMS1	99	90.406	ENSUAMG00000023996	BMS1	99	90.796	Ursus_americanus
ENSPTRG00000002441	BMS1	99	90.250	ENSUMAG00000016523	BMS1	99	90.640	Ursus_maritimus
ENSPTRG00000002441	BMS1	88	83.363	ENSVPAG00000007477	BMS1	100	84.331	Vicugna_pacos
ENSPTRG00000002441	BMS1	99	90.101	ENSVVUG00000021305	BMS1	99	89.400	Vulpes_vulpes
ENSPTRG00000002441	BMS1	98	65.197	ENSXETG00000008158	bms1	99	65.710	Xenopus_tropicalis
ENSPTRG00000002441	BMS1	85	68.211	ENSXCOG00000000506	bms1	96	75.122	Xiphophorus_couchianus
ENSPTRG00000002441	BMS1	85	67.992	ENSXMAG00000014236	bms1	97	65.533	Xiphophorus_maculatus