EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000002562 (Gene tree)
Gene ID: 450499
Gene Symbol: DDX50
Alias: -
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 46608 bases
Position: chr10:69965261-70011868
Accession: 12294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000059960	GUCT	PF08152.12	1.1e-27	1	1
ENSPTRP00000004429	GUCT	PF08152.12	1.1e-27	1	1
ENSPTRP00000004429	ResIII	PF04851.15	5.9e-10	1	1
ENSPTRP00000059960	ResIII	PF04851.15	6.6e-10	1	1
ENSPTRP00000004429	DEAD	PF00270.29	2.7e-47	1	1
ENSPTRP00000059960	DEAD	PF00270.29	3.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000073896	-	4270	XM_009458591	ENSPTRP00000059960	737 (aa)	XP_009456866	H2REM2
ENSPTRT00000004802	-	2139	-	ENSPTRP00000004429	713 (aa)	-	H2Q200
ENSPTRT00000108220	-	156	-	ENSPTRP00000083326	51 (aa)	-	A0A2I3T277

Gene Model

Click here to download ENSPTRG00000002562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000002562's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000002562	DDX50	50	30.495	ENSPTRG00000004353	DDX6	71	30.495
ENSPTRG00000002562	DDX50	50	32.603	ENSPTRG00000017589	DDX41	57	32.603
ENSPTRG00000002562	DDX50	51	33.424	ENSPTRG00000033743	DDX47	70	34.524
ENSPTRG00000002562	DDX50	51	34.417	ENSPTRG00000014369	DDX17	75	33.846
ENSPTRG00000002562	DDX50	52	71.316	ENSPTRG00000044913	-	99	72.368
ENSPTRG00000002562	DDX50	93	62.536	ENSPTRG00000002563	DDX21	76	65.523
ENSPTRG00000002562	DDX50	52	30.079	ENSPTRG00000047092	-	72	30.176
ENSPTRG00000002562	DDX50	51	30.579	ENSPTRG00000028313	DDX53	56	30.579
ENSPTRG00000002562	DDX50	51	32.533	ENSPTRG00000009737	EIF4A3	86	32.533
ENSPTRG00000002562	DDX50	51	31.536	ENSPTRG00000015718	EIF4A2	87	31.536
ENSPTRG00000002562	DDX50	51	35.279	ENSPTRG00000012391	DDX18	54	35.279
ENSPTRG00000002562	DDX50	57	33.099	ENSPTRG00000013602	DDX27	52	32.326
ENSPTRG00000002562	DDX50	51	32.533	ENSPTRG00000008694	EIF4A1	88	31.989
ENSPTRG00000002562	DDX50	51	33.243	ENSPTRG00000009543	DDX5	62	33.518
ENSPTRG00000002562	DDX50	50	35.014	ENSPTRG00000018344	DDX43	54	35.211
ENSPTRG00000002562	DDX50	50	32.791	ENSPTRG00000009523	DDX42	50	32.791
ENSPTRG00000002562	DDX50	50	31.915	ENSPTRG00000049651	DDX3X	54	33.523

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000002562	DDX50	100	99.864	ENSG00000107625	DDX50	100	99.864	Homo_sapiens
ENSPTRG00000002562	DDX50	100	97.561	ENSAMEG00000017992	DDX50	100	97.561	Ailuropoda_melanoleuca
ENSPTRG00000002562	DDX50	92	79.161	ENSANAG00000017785	-	91	79.016	Aotus_nancymaae
ENSPTRG00000002562	DDX50	100	97.286	ENSBTAG00000033413	DDX50	100	97.286	Bos_taurus
ENSPTRG00000002562	DDX50	100	99.593	ENSCJAG00000018844	DDX50	100	99.593	Callithrix_jacchus
ENSPTRG00000002562	DDX50	100	97.696	ENSCAFG00000013776	DDX50	100	97.696	Canis_familiaris
ENSPTRG00000002562	DDX50	100	97.696	ENSCAFG00020025977	DDX50	99	97.696	Canis_lupus_dingo
ENSPTRG00000002562	DDX50	100	97.015	ENSCHIG00000000285	DDX50	99	97.015	Capra_hircus
ENSPTRG00000002562	DDX50	100	98.236	ENSTSYG00000004192	DDX50	100	98.236	Carlito_syrichta
ENSPTRG00000002562	DDX50	100	78.290	ENSCAPG00000007230	-	100	78.290	Cavia_aperea
ENSPTRG00000002562	DDX50	100	96.472	ENSCPOG00000002131	-	100	96.472	Cavia_porcellus
ENSPTRG00000002562	DDX50	91	90.476	ENSCCAG00000030543	DDX50	100	90.476	Cebus_capucinus
ENSPTRG00000002562	DDX50	98	73.407	ENSCATG00000035153	-	89	90.282	Cercocebus_atys
ENSPTRG00000002562	DDX50	99	67.568	ENSCATG00000039259	-	89	68.869	Cercocebus_atys
ENSPTRG00000002562	DDX50	96	99.707	ENSCATG00000032463	DDX50	96	99.707	Cercocebus_atys
ENSPTRG00000002562	DDX50	51	87.569	ENSCLAG00000001553	-	79	88.710	Chinchilla_lanigera
ENSPTRG00000002562	DDX50	97	71.067	ENSCLAG00000001938	-	91	71.669	Chinchilla_lanigera
ENSPTRG00000002562	DDX50	100	97.693	ENSCLAG00000012957	-	100	97.693	Chinchilla_lanigera
ENSPTRG00000002562	DDX50	100	99.593	ENSCSAG00000007703	DDX50	100	99.593	Chlorocebus_sabaeus
ENSPTRG00000002562	DDX50	90	95.646	ENSCHOG00000000233	DDX50	100	95.646	Choloepus_hoffmanni
ENSPTRG00000002562	DDX50	100	85.617	ENSCANG00000036450	-	100	85.617	Colobus_angolensis_palliatus
ENSPTRG00000002562	DDX50	96	70.070	ENSCANG00000028077	-	91	69.693	Colobus_angolensis_palliatus
ENSPTRG00000002562	DDX50	88	72.684	ENSCANG00000018820	-	88	73.565	Colobus_angolensis_palliatus
ENSPTRG00000002562	DDX50	92	96.018	ENSCGRG00001020223	Ddx50	92	96.018	Cricetulus_griseus_chok1gshd
ENSPTRG00000002562	DDX50	92	96.148	ENSCGRG00000015884	Ddx50	92	96.018	Cricetulus_griseus_crigri
ENSPTRG00000002562	DDX50	88	90.741	ENSDNOG00000001675	DDX50	100	90.741	Dasypus_novemcinctus
ENSPTRG00000002562	DDX50	100	97.151	ENSDORG00000007310	Ddx50	100	97.151	Dipodomys_ordii
ENSPTRG00000002562	DDX50	90	97.753	ENSETEG00000014069	DDX50	90	97.566	Echinops_telfairi
ENSPTRG00000002562	DDX50	100	97.422	ENSEASG00005015595	DDX50	99	97.422	Equus_asinus_asinus
ENSPTRG00000002562	DDX50	100	97.558	ENSECAG00000023044	DDX50	99	97.558	Equus_caballus
ENSPTRG00000002562	DDX50	91	96.764	ENSEEUG00000005782	DDX50	88	96.764	Erinaceus_europaeus
ENSPTRG00000002562	DDX50	100	98.103	ENSFCAG00000012678	DDX50	99	98.103	Felis_catus
ENSPTRG00000002562	DDX50	92	90.265	ENSFDAG00000016109	-	91	90.265	Fukomys_damarensis
ENSPTRG00000002562	DDX50	52	71.354	ENSGGOG00000022568	-	90	79.814	Gorilla_gorilla
ENSPTRG00000002562	DDX50	52	82.749	ENSGGOG00000041063	-	82	85.580	Gorilla_gorilla
ENSPTRG00000002562	DDX50	100	99.864	ENSGGOG00000010100	DDX50	100	99.864	Gorilla_gorilla
ENSPTRG00000002562	DDX50	92	95.870	ENSHGLG00000013466	DDX50	92	95.870	Heterocephalus_glaber_female
ENSPTRG00000002562	DDX50	82	88.298	ENSHGLG00100006568	-	92	88.298	Heterocephalus_glaber_male
ENSPTRG00000002562	DDX50	92	95.870	ENSHGLG00100017191	DDX50	92	95.870	Heterocephalus_glaber_male
ENSPTRG00000002562	DDX50	100	95.799	ENSSTOG00000021852	-	100	95.799	Ictidomys_tridecemlineatus
ENSPTRG00000002562	DDX50	100	94.844	ENSJJAG00000023928	-	92	94.690	Jaculus_jaculus
ENSPTRG00000002562	DDX50	100	73.414	ENSJJAG00000019626	-	91	73.985	Jaculus_jaculus
ENSPTRG00000002562	DDX50	100	98.100	ENSLAFG00000006186	DDX50	100	98.100	Loxodonta_africana
ENSPTRG00000002562	DDX50	98	72.715	ENSMFAG00000045339	-	89	89.342	Macaca_fascicularis
ENSPTRG00000002562	DDX50	100	99.593	ENSMFAG00000044067	DDX50	100	99.593	Macaca_fascicularis
ENSPTRG00000002562	DDX50	100	99.593	ENSMMUG00000001006	DDX50	100	99.851	Macaca_mulatta
ENSPTRG00000002562	DDX50	93	65.714	ENSMMUG00000045343	-	90	65.611	Macaca_mulatta
ENSPTRG00000002562	DDX50	98	73.931	ENSMNEG00000045530	-	89	90.596	Macaca_nemestrina
ENSPTRG00000002562	DDX50	100	92.717	ENSMNEG00000031664	DDX50	100	93.216	Macaca_nemestrina
ENSPTRG00000002562	DDX50	50	74.652	ENSMNEG00000034754	-	89	73.538	Macaca_nemestrina
ENSPTRG00000002562	DDX50	87	84.579	ENSMLEG00000041988	-	89	88.114	Mandrillus_leucophaeus
ENSPTRG00000002562	DDX50	100	97.693	ENSMLEG00000037313	DDX50	100	97.693	Mandrillus_leucophaeus
ENSPTRG00000002562	DDX50	56	94.431	ENSMAUG00000022192	Ddx50	100	94.431	Mesocricetus_auratus
ENSPTRG00000002562	DDX50	100	90.638	ENSMICG00000017539	DDX50	100	90.638	Microcebus_murinus
ENSPTRG00000002562	DDX50	92	95.588	ENSMOCG00000001676	Ddx50	92	95.588	Microtus_ochrogaster
ENSPTRG00000002562	DDX50	92	80.205	ENSMODG00000010741	DDX50	92	80.758	Monodelphis_domestica
ENSPTRG00000002562	DDX50	92	94.248	MGP_CAROLIEiJ_G0015389	Ddx50	92	94.985	Mus_caroli
ENSPTRG00000002562	DDX50	92	94.690	ENSMUSG00000020076	Ddx50	92	95.428	Mus_musculus
ENSPTRG00000002562	DDX50	92	94.838	MGP_PahariEiJ_G0030805	Ddx50	92	95.575	Mus_pahari
ENSPTRG00000002562	DDX50	92	94.690	MGP_SPRETEiJ_G0016200	Ddx50	92	95.428	Mus_spretus
ENSPTRG00000002562	DDX50	88	96.914	ENSMPUG00000004589	DDX50	99	96.914	Mustela_putorius_furo
ENSPTRG00000002562	DDX50	100	96.201	ENSMLUG00000017590	DDX50	100	96.201	Myotis_lucifugus
ENSPTRG00000002562	DDX50	100	96.744	ENSNGAG00000004283	Ddx50	100	96.744	Nannospalax_galili
ENSPTRG00000002562	DDX50	98	66.902	ENSNLEG00000035506	-	88	78.505	Nomascus_leucogenys
ENSPTRG00000002562	DDX50	100	99.860	ENSNLEG00000011631	DDX50	100	99.860	Nomascus_leucogenys
ENSPTRG00000002562	DDX50	92	93.805	ENSOPRG00000001619	DDX50	92	94.543	Ochotona_princeps
ENSPTRG00000002562	DDX50	100	96.336	ENSODEG00000014597	-	100	96.336	Octodon_degus
ENSPTRG00000002562	DDX50	93	67.335	ENSOANG00000004776	DDX50	82	68.140	Ornithorhynchus_anatinus
ENSPTRG00000002562	DDX50	100	95.528	ENSOCUG00000002879	DDX50	100	95.528	Oryctolagus_cuniculus
ENSPTRG00000002562	DDX50	100	98.236	ENSOGAG00000001844	DDX50	100	98.236	Otolemur_garnettii
ENSPTRG00000002562	DDX50	100	97.015	ENSOARG00000005264	DDX50	99	97.015	Ovis_aries
ENSPTRG00000002562	DDX50	52	71.316	ENSPPAG00000026788	-	89	79.874	Pan_paniscus
ENSPTRG00000002562	DDX50	100	100.000	ENSPPAG00000040723	DDX50	100	100.000	Pan_paniscus
ENSPTRG00000002562	DDX50	50	83.333	ENSPPAG00000033902	-	87	84.639	Pan_paniscus
ENSPTRG00000002562	DDX50	100	98.103	ENSPPRG00000015826	DDX50	100	98.103	Panthera_pardus
ENSPTRG00000002562	DDX50	100	98.103	ENSPTIG00000008454	DDX50	100	98.103	Panthera_tigris_altaica
ENSPTRG00000002562	DDX50	93	91.679	ENSPANG00000022143	-	92	91.740	Papio_anubis
ENSPTRG00000002562	DDX50	50	75.209	ENSPANG00000032548	-	89	74.154	Papio_anubis
ENSPTRG00000002562	DDX50	92	94.838	ENSPEMG00000020899	-	92	94.838	Peromyscus_maniculatus_bairdii
ENSPTRG00000002562	DDX50	92	80.147	ENSPCIG00000016036	DDX50	93	81.402	Phascolarctos_cinereus
ENSPTRG00000002562	DDX50	93	99.849	ENSPPYG00000002390	DDX50	100	100.000	Pongo_abelii
ENSPTRG00000002562	DDX50	84	83.766	ENSPCAG00000009692	DDX50	100	83.766	Procavia_capensis
ENSPTRG00000002562	DDX50	79	93.939	ENSPCOG00000012574	DDX50	91	93.939	Propithecus_coquereli
ENSPTRG00000002562	DDX50	86	95.868	ENSPVAG00000009519	DDX50	78	95.868	Pteropus_vampyrus
ENSPTRG00000002562	DDX50	92	94.100	ENSRNOG00000000396	Ddx50	98	98.396	Rattus_norvegicus
ENSPTRG00000002562	DDX50	87	97.667	ENSRBIG00000042841	-	98	99.141	Rhinopithecus_bieti
ENSPTRG00000002562	DDX50	99	68.200	ENSRBIG00000039673	-	90	67.548	Rhinopithecus_bieti
ENSPTRG00000002562	DDX50	99	68.759	ENSRBIG00000036573	-	92	68.843	Rhinopithecus_bieti
ENSPTRG00000002562	DDX50	99	66.440	ENSRROG00000022853	-	91	66.027	Rhinopithecus_roxellana
ENSPTRG00000002562	DDX50	100	99.439	ENSRROG00000032158	DDX50	100	99.439	Rhinopithecus_roxellana
ENSPTRG00000002562	DDX50	53	72.414	ENSRROG00000031940	-	87	75.692	Rhinopithecus_roxellana
ENSPTRG00000002562	DDX50	100	88.738	ENSSBOG00000014441	DDX50	100	88.738	Saimiri_boliviensis_boliviensis
ENSPTRG00000002562	DDX50	88	81.307	ENSSHAG00000005690	DDX50	91	81.364	Sarcophilus_harrisii
ENSPTRG00000002562	DDX50	84	65.463	ENSSHAG00000005334	-	86	63.868	Sarcophilus_harrisii
ENSPTRG00000002562	DDX50	100	80.326	ENSSARG00000013553	DDX50	88	88.062	Sorex_araneus
ENSPTRG00000002562	DDX50	100	96.201	ENSSSCG00000010246	DDX50	92	96.165	Sus_scrofa
ENSPTRG00000002562	DDX50	96	75.668	ENSTBEG00000001085	DDX50	99	72.428	Tupaia_belangeri
ENSPTRG00000002562	DDX50	100	91.045	ENSTTRG00000012408	DDX50	99	91.045	Tursiops_truncatus
ENSPTRG00000002562	DDX50	100	97.561	ENSUAMG00000010976	DDX50	99	98.976	Ursus_americanus
ENSPTRG00000002562	DDX50	100	97.561	ENSUMAG00000007726	DDX50	99	97.561	Ursus_maritimus
ENSPTRG00000002562	DDX50	100	97.151	ENSVPAG00000000626	DDX50	100	97.151	Vicugna_pacos
ENSPTRG00000002562	DDX50	82	92.206	ENSVVUG00000020366	DDX50	98	99.198	Vulpes_vulpes