EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000002806 (Gene tree)
Gene ID: 450649
Gene Symbol: RRP12
Alias: -
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 43618 bases
Position: chr10:98710215-98753832
Accession: 5718
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000090290	NUC173	PF08161.12	5e-75	1	1
ENSPTRP00000040015	NUC173	PF08161.12	5.8e-75	1	1
ENSPTRP00000078616	NUC173	PF08161.12	2.6e-63	1	1
ENSPTRP00000078782	NUC173	PF08161.12	2e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000109772	-	3591	-	ENSPTRP00000090290	1196 (aa)	-	A0A2I3TM20
ENSPTRT00000097971	-	3804	-	ENSPTRP00000078782	1267 (aa)	-	A0A2I3SP50
ENSPTRT00000005312	-	3708	XM_001161750	ENSPTRP00000040015	1235 (aa)	XP_001161750	H2R025
ENSPTRT00000106343	-	3909	XM_016919031	ENSPTRP00000078616	1302 (aa)	XP_016774520	A0A2I3SQ21

Gene Model

Click here to download ENSPTRG00000002806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000002806's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000002806	RRP12	99	99.342	ENSG00000052749	RRP12	100	100.000	Homo_sapiens
ENSPTRG00000002806	RRP12	99	61.491	ENSAPOG00000013355	rrp12	99	61.039	Acanthochromis_polyacanthus
ENSPTRG00000002806	RRP12	99	95.395	ENSAMEG00000000134	RRP12	98	95.395	Ailuropoda_melanoleuca
ENSPTRG00000002806	RRP12	99	61.853	ENSACIG00000022673	rrp12	99	62.011	Amphilophus_citrinellus
ENSPTRG00000002806	RRP12	99	62.229	ENSAOCG00000016149	rrp12	99	62.000	Amphiprion_ocellaris
ENSPTRG00000002806	RRP12	99	61.717	ENSAPEG00000016023	rrp12	99	61.491	Amphiprion_percula
ENSPTRG00000002806	RRP12	99	75.000	ENSATEG00000022627	rrp12	97	75.000	Anabas_testudineus
ENSPTRG00000002806	RRP12	96	65.180	ENSAPLG00000014387	RRP12	99	64.235	Anas_platyrhynchos
ENSPTRG00000002806	RRP12	99	67.949	ENSACAG00000002175	RRP12	98	65.423	Anolis_carolinensis
ENSPTRG00000002806	RRP12	99	96.353	ENSANAG00000037485	RRP12	99	96.353	Aotus_nancymaae
ENSPTRG00000002806	RRP12	99	75.000	ENSACLG00000007354	rrp12	99	61.776	Astatotilapia_calliptera
ENSPTRG00000002806	RRP12	99	69.143	ENSAMXG00000012852	rrp12	98	69.143	Astyanax_mexicanus
ENSPTRG00000002806	RRP12	99	93.506	ENSBTAG00000002191	RRP12	99	93.506	Bos_taurus
ENSPTRG00000002806	RRP12	93	31.618	WBGene00021595	Y46E12BL.2	89	31.618	Caenorhabditis_elegans
ENSPTRG00000002806	RRP12	88	95.856	ENSCJAG00000016549	-	98	95.856	Callithrix_jacchus
ENSPTRG00000002806	RRP12	99	94.737	ENSCAFG00000009043	RRP12	96	92.357	Canis_familiaris
ENSPTRG00000002806	RRP12	99	94.737	ENSCAFG00020005991	RRP12	96	92.357	Canis_lupus_dingo
ENSPTRG00000002806	RRP12	99	92.157	ENSCHIG00000011876	RRP12	99	85.233	Capra_hircus
ENSPTRG00000002806	RRP12	58	88.937	ENSTSYG00000030210	-	99	88.937	Carlito_syrichta
ENSPTRG00000002806	RRP12	96	81.627	ENSCAPG00000008991	RRP12	98	81.435	Cavia_aperea
ENSPTRG00000002806	RRP12	99	89.299	ENSCPOG00000004215	RRP12	97	89.207	Cavia_porcellus
ENSPTRG00000002806	RRP12	76	94.962	ENSCCAG00000033123	-	83	94.962	Cebus_capucinus
ENSPTRG00000002806	RRP12	79	93.151	ENSCCAG00000024088	RRP12	100	96.714	Cebus_capucinus
ENSPTRG00000002806	RRP12	99	97.368	ENSCATG00000045310	RRP12	99	93.312	Cercocebus_atys
ENSPTRG00000002806	RRP12	99	90.037	ENSCLAG00000003753	RRP12	99	89.665	Chinchilla_lanigera
ENSPTRG00000002806	RRP12	88	97.509	ENSCSAG00000005877	RRP12	95	97.509	Chlorocebus_sabaeus
ENSPTRG00000002806	RRP12	59	95.385	ENSCHOG00000003095	-	60	95.385	Choloepus_hoffmanni
ENSPTRG00000002806	RRP12	93	82.432	ENSCPBG00000011935	RRP12	89	82.432	Chrysemys_picta_bellii
ENSPTRG00000002806	RRP12	69	39.529	ENSCSAVG00000006059	-	99	39.461	Ciona_savignyi
ENSPTRG00000002806	RRP12	99	97.993	ENSCANG00000031653	RRP12	99	98.026	Colobus_angolensis_palliatus
ENSPTRG00000002806	RRP12	90	89.871	ENSCGRG00001004338	Rrp12	92	96.552	Cricetulus_griseus_chok1gshd
ENSPTRG00000002806	RRP12	100	89.871	ENSCGRG00000011965	Rrp12	97	89.503	Cricetulus_griseus_crigri
ENSPTRG00000002806	RRP12	99	72.727	ENSCSEG00000007799	rrp12	92	72.727	Cynoglossus_semilaevis
ENSPTRG00000002806	RRP12	99	76.316	ENSCVAG00000003418	rrp12	92	76.316	Cyprinodon_variegatus
ENSPTRG00000002806	RRP12	99	67.816	ENSDARG00000022410	rrp12	97	67.816	Danio_rerio
ENSPTRG00000002806	RRP12	99	91.447	ENSDNOG00000005120	RRP12	99	85.407	Dasypus_novemcinctus
ENSPTRG00000002806	RRP12	99	90.775	ENSDORG00000009199	Rrp12	97	90.683	Dipodomys_ordii
ENSPTRG00000002806	RRP12	98	35.366	FBgn0030504	CG2691	95	34.940	Drosophila_melanogaster
ENSPTRG00000002806	RRP12	96	75.727	ENSETEG00000002455	RRP12	93	75.179	Echinops_telfairi
ENSPTRG00000002806	RRP12	88	61.333	ENSEBUG00000006555	rrp12	99	70.213	Eptatretus_burgeri
ENSPTRG00000002806	RRP12	99	91.889	ENSEASG00005008693	RRP12	99	91.874	Equus_asinus_asinus
ENSPTRG00000002806	RRP12	94	91.982	ENSECAG00000010892	RRP12	99	91.969	Equus_caballus
ENSPTRG00000002806	RRP12	60	96.629	ENSEEUG00000005447	-	64	75.141	Erinaceus_europaeus
ENSPTRG00000002806	RRP12	99	69.540	ENSELUG00000010510	rrp12	97	69.792	Esox_lucius
ENSPTRG00000002806	RRP12	99	94.737	ENSFCAG00000028639	RRP12	99	94.737	Felis_catus
ENSPTRG00000002806	RRP12	93	87.671	ENSFALG00000008458	RRP12	91	87.671	Ficedula_albicollis
ENSPTRG00000002806	RRP12	99	89.852	ENSFDAG00000019108	RRP12	95	87.017	Fukomys_damarensis
ENSPTRG00000002806	RRP12	99	57.623	ENSFHEG00000004148	rrp12	99	57.343	Fundulus_heteroclitus
ENSPTRG00000002806	RRP12	99	73.026	ENSGMOG00000004188	rrp12	92	73.684	Gadus_morhua
ENSPTRG00000002806	RRP12	100	75.325	ENSGALG00000041331	RRP12	92	74.359	Gallus_gallus
ENSPTRG00000002806	RRP12	99	62.510	ENSGAFG00000009038	rrp12	92	75.000	Gambusia_affinis
ENSPTRG00000002806	RRP12	99	71.711	ENSGACG00000007175	rrp12	92	71.711	Gasterosteus_aculeatus
ENSPTRG00000002806	RRP12	65	76.344	ENSGAGG00000019169	RRP12	96	72.979	Gopherus_agassizii
ENSPTRG00000002806	RRP12	99	99.514	ENSGGOG00000014850	RRP12	99	99.514	Gorilla_gorilla
ENSPTRG00000002806	RRP12	99	75.000	ENSHBUG00000023527	rrp12	99	61.462	Haplochromis_burtoni
ENSPTRG00000002806	RRP12	99	89.022	ENSHGLG00000016772	RRP12	97	89.483	Heterocephalus_glaber_female
ENSPTRG00000002806	RRP12	99	89.022	ENSHGLG00100015110	RRP12	97	89.483	Heterocephalus_glaber_male
ENSPTRG00000002806	RRP12	99	74.342	ENSHCOG00000019519	rrp12	97	74.342	Hippocampus_comes
ENSPTRG00000002806	RRP12	99	58.900	ENSIPUG00000000311	RRP12	99	59.199	Ictalurus_punctatus
ENSPTRG00000002806	RRP12	99	92.066	ENSSTOG00000006515	RRP12	97	91.882	Ictidomys_tridecemlineatus
ENSPTRG00000002806	RRP12	96	90.535	ENSJJAG00000000110	Rrp12	99	86.709	Jaculus_jaculus
ENSPTRG00000002806	RRP12	99	75.658	ENSKMAG00000020621	rrp12	97	75.658	Kryptolebias_marmoratus
ENSPTRG00000002806	RRP12	100	60.093	ENSLBEG00000015335	rrp12	92	73.684	Labrus_bergylta
ENSPTRG00000002806	RRP12	69	76.623	ENSLACG00000016633	RRP12	72	76.623	Latimeria_chalumnae
ENSPTRG00000002806	RRP12	100	62.117	ENSLOCG00000003846	rrp12	97	65.934	Lepisosteus_oculatus
ENSPTRG00000002806	RRP12	99	91.168	ENSLAFG00000015965	RRP12	97	90.708	Loxodonta_africana
ENSPTRG00000002806	RRP12	99	97.993	ENSMFAG00000041558	RRP12	99	97.993	Macaca_fascicularis
ENSPTRG00000002806	RRP12	99	97.993	ENSMMUG00000019634	RRP12	99	97.993	Macaca_mulatta
ENSPTRG00000002806	RRP12	99	93.360	ENSMNEG00000036759	RRP12	99	97.368	Macaca_nemestrina
ENSPTRG00000002806	RRP12	99	97.993	ENSMLEG00000041317	RRP12	99	97.993	Mandrillus_leucophaeus
ENSPTRG00000002806	RRP12	93	82.432	ENSMAMG00000002964	rrp12	92	82.432	Mastacembelus_armatus
ENSPTRG00000002806	RRP12	99	75.000	ENSMZEG00005003241	rrp12	99	61.615	Maylandia_zebra
ENSPTRG00000002806	RRP12	99	69.705	ENSMGAG00000009829	RRP12	99	67.512	Meleagris_gallopavo
ENSPTRG00000002806	RRP12	100	85.727	ENSMAUG00000020743	Rrp12	99	83.449	Mesocricetus_auratus
ENSPTRG00000002806	RRP12	100	92.569	ENSMICG00000007624	RRP12	100	92.569	Microcebus_murinus
ENSPTRG00000002806	RRP12	99	90.775	ENSMOCG00000006753	Rrp12	97	90.406	Microtus_ochrogaster
ENSPTRG00000002806	RRP12	100	61.330	ENSMMOG00000010708	rrp12	99	61.437	Mola_mola
ENSPTRG00000002806	RRP12	99	77.852	ENSMODG00000004315	RRP12	99	76.561	Monodelphis_domestica
ENSPTRG00000002806	RRP12	99	71.711	ENSMALG00000016560	rrp12	97	71.711	Monopterus_albus
ENSPTRG00000002806	RRP12	99	90.789	MGP_CAROLIEiJ_G0022957	Rrp12	99	86.458	Mus_caroli
ENSPTRG00000002806	RRP12	99	90.789	ENSMUSG00000035049	Rrp12	97	89.760	Mus_musculus
ENSPTRG00000002806	RRP12	99	90.132	MGP_PahariEiJ_G0014447	Rrp12	97	89.945	Mus_pahari
ENSPTRG00000002806	RRP12	99	90.789	MGP_SPRETEiJ_G0023878	Rrp12	97	89.852	Mus_spretus
ENSPTRG00000002806	RRP12	99	93.421	ENSMPUG00000017046	RRP12	96	91.083	Mustela_putorius_furo
ENSPTRG00000002806	RRP12	99	92.746	ENSMLUG00000017160	RRP12	97	92.746	Myotis_lucifugus
ENSPTRG00000002806	RRP12	99	92.763	ENSNGAG00000024144	Rrp12	96	90.446	Nannospalax_galili
ENSPTRG00000002806	RRP12	99	75.000	ENSNBRG00000009987	rrp12	95	74.026	Neolamprologus_brichardi
ENSPTRG00000002806	RRP12	92	97.368	ENSNLEG00000013762	RRP12	99	97.368	Nomascus_leucogenys
ENSPTRG00000002806	RRP12	97	79.575	ENSMEUG00000003185	RRP12	93	79.390	Notamacropus_eugenii
ENSPTRG00000002806	RRP12	93	92.105	ENSOPRG00000005001	RRP12	89	90.244	Ochotona_princeps
ENSPTRG00000002806	RRP12	99	87.546	ENSODEG00000016439	RRP12	99	87.273	Octodon_degus
ENSPTRG00000002806	RRP12	99	75.658	ENSONIG00000009528	rrp12	99	61.923	Oreochromis_niloticus
ENSPTRG00000002806	RRP12	99	79.739	ENSOANG00000006560	RRP12	92	79.739	Ornithorhynchus_anatinus
ENSPTRG00000002806	RRP12	100	92.105	ENSOCUG00000005662	RRP12	99	90.343	Oryctolagus_cuniculus
ENSPTRG00000002806	RRP12	99	62.085	ENSORLG00000008688	rrp12	99	63.674	Oryzias_latipes
ENSPTRG00000002806	RRP12	98	62.264	ENSORLG00020002355	rrp12	99	62.618	Oryzias_latipes_hni
ENSPTRG00000002806	RRP12	99	62.317	ENSORLG00015006709	rrp12	99	62.404	Oryzias_latipes_hsok
ENSPTRG00000002806	RRP12	98	62.736	ENSOMEG00000002609	rrp12	99	62.983	Oryzias_melastigma
ENSPTRG00000002806	RRP12	99	90.533	ENSOGAG00000001626	RRP12	97	90.257	Otolemur_garnettii
ENSPTRG00000002806	RRP12	99	90.613	ENSOARG00000009681	RRP12	97	89.604	Ovis_aries
ENSPTRG00000002806	RRP12	100	99.846	ENSPPAG00000043885	RRP12	100	99.846	Pan_paniscus
ENSPTRG00000002806	RRP12	100	94.079	ENSPPRG00000002029	RRP12	99	94.079	Panthera_pardus
ENSPTRG00000002806	RRP12	100	92.500	ENSPTIG00000004428	RRP12	99	94.079	Panthera_tigris_altaica
ENSPTRG00000002806	RRP12	99	97.910	ENSPANG00000021360	RRP12	99	97.910	Papio_anubis
ENSPTRG00000002806	RRP12	99	68.824	ENSPKIG00000016516	rrp12	98	68.824	Paramormyrops_kingsleyae
ENSPTRG00000002806	RRP12	99	75.000	ENSPMGG00000020217	rrp12	92	75.000	Periophthalmus_magnuspinnatus
ENSPTRG00000002806	RRP12	99	90.147	ENSPEMG00000008437	Rrp12	97	89.779	Peromyscus_maniculatus_bairdii
ENSPTRG00000002806	RRP12	99	55.682	ENSPMAG00000007493	rrp12	97	55.682	Petromyzon_marinus
ENSPTRG00000002806	RRP12	96	81.132	ENSPCIG00000002157	RRP12	95	84.564	Phascolarctos_cinereus
ENSPTRG00000002806	RRP12	99	61.967	ENSPFOG00000014975	rrp12	92	76.316	Poecilia_formosa
ENSPTRG00000002806	RRP12	99	61.735	ENSPLAG00000009840	rrp12	92	75.658	Poecilia_latipinna
ENSPTRG00000002806	RRP12	99	62.208	ENSPMEG00000021871	rrp12	92	76.316	Poecilia_mexicana
ENSPTRG00000002806	RRP12	99	61.776	ENSPREG00000020950	rrp12	92	76.316	Poecilia_reticulata
ENSPTRG00000002806	RRP12	99	98.684	ENSPPYG00000002528	RRP12	97	96.402	Pongo_abelii
ENSPTRG00000002806	RRP12	99	94.079	ENSPCAG00000008967	RRP12	94	94.915	Procavia_capensis
ENSPTRG00000002806	RRP12	99	92.551	ENSPCOG00000014009	RRP12	99	93.421	Propithecus_coquereli
ENSPTRG00000002806	RRP12	99	85.741	ENSPVAG00000003370	RRP12	99	84.527	Pteropus_vampyrus
ENSPTRG00000002806	RRP12	99	75.000	ENSPNYG00000009451	rrp12	99	61.931	Pundamilia_nyererei
ENSPTRG00000002806	RRP12	99	68.966	ENSPNAG00000007658	rrp12	97	68.966	Pygocentrus_nattereri
ENSPTRG00000002806	RRP12	99	90.132	ENSRNOG00000048495	Rrp12	97	89.114	Rattus_norvegicus
ENSPTRG00000002806	RRP12	99	97.910	ENSRBIG00000021296	RRP12	99	98.026	Rhinopithecus_bieti
ENSPTRG00000002806	RRP12	99	98.077	ENSRROG00000032482	RRP12	99	98.077	Rhinopithecus_roxellana
ENSPTRG00000002806	RRP12	100	95.948	ENSSBOG00000030992	RRP12	100	96.026	Saimiri_boliviensis_boliviensis
ENSPTRG00000002806	RRP12	99	82.237	ENSSHAG00000018275	RRP12	95	81.169	Sarcophilus_harrisii
ENSPTRG00000002806	RRP12	100	62.433	ENSSFOG00015016400	rrp12	92	75.658	Scleropages_formosus
ENSPTRG00000002806	RRP12	99	60.341	ENSSMAG00000004047	rrp12	92	73.684	Scophthalmus_maximus
ENSPTRG00000002806	RRP12	99	74.342	ENSSDUG00000022871	rrp12	99	61.030	Seriola_dumerili
ENSPTRG00000002806	RRP12	99	61.021	ENSSLDG00000003038	rrp12	92	74.342	Seriola_lalandi_dorsalis
ENSPTRG00000002806	RRP12	99	67.908	ENSSPUG00000012221	RRP12	99	67.563	Sphenodon_punctatus
ENSPTRG00000002806	RRP12	99	75.000	ENSSPAG00000002261	rrp12	99	62.074	Stegastes_partitus
ENSPTRG00000002806	RRP12	99	91.503	ENSSSCG00000010514	RRP12	99	86.749	Sus_scrofa
ENSPTRG00000002806	RRP12	88	68.940	ENSTGUG00000009711	RRP12	99	67.189	Taeniopygia_guttata
ENSPTRG00000002806	RRP12	100	58.017	ENSTRUG00000012017	rrp12	99	58.741	Takifugu_rubripes
ENSPTRG00000002806	RRP12	99	76.316	ENSTNIG00000016522	rrp12	92	76.316	Tetraodon_nigroviridis
ENSPTRG00000002806	RRP12	83	92.233	ENSTBEG00000004907	RRP12	80	92.233	Tupaia_belangeri
ENSPTRG00000002806	RRP12	99	94.079	ENSTTRG00000009878	RRP12	95	94.079	Tursiops_truncatus
ENSPTRG00000002806	RRP12	99	95.425	ENSUAMG00000009092	RRP12	95	95.395	Ursus_americanus
ENSPTRG00000002806	RRP12	99	90.019	ENSUMAG00000021621	RRP12	99	86.332	Ursus_maritimus
ENSPTRG00000002806	RRP12	99	95.395	ENSVVUG00000023168	RRP12	95	92.994	Vulpes_vulpes
ENSPTRG00000002806	RRP12	100	65.895	ENSXETG00000003430	rrp12	92	75.163	Xenopus_tropicalis
ENSPTRG00000002806	RRP12	90	63.979	ENSXCOG00000012082	rrp12	90	76.316	Xiphophorus_couchianus
ENSPTRG00000002806	RRP12	99	62.355	ENSXMAG00000013498	rrp12	92	76.316	Xiphophorus_maculatus