EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000002808 (Gene tree)
Gene ID: 450651
Gene Symbol: EXOSC1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 10019 bases
Position: chr10:98788748-98798766
Accession: 3845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000050411	EXOSC1	PF10447.9	1.1e-14	1	1
ENSPTRP00000072836	EXOSC1	PF10447.9	3.6e-13	1	1
ENSPTRP00000092197	ECR1_N	PF14382.6	7.2e-09	1	1
ENSPTRP00000091058	ECR1_N	PF14382.6	7.9e-09	1	1
ENSPTRP00000072836	ECR1_N	PF14382.6	9.3e-09	1	1
ENSPTRP00000050411	ECR1_N	PF14382.6	1.1e-08	1	1
ENSPTRP00000092106	ECR1_N	PF14382.6	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000102467	-	465	-	ENSPTRP00000091058	154 (aa)	-	A0A2I3TP97
ENSPTRT00000094985	-	958	XM_009459050	ENSPTRP00000072836	170 (aa)	XP_009457325	A0A2I3S764
ENSPTRT00000057521	-	1033	XM_009459049	ENSPTRP00000050411	195 (aa)	XP_009457324	H2R7H7
ENSPTRT00000086420	-	420	-	ENSPTRP00000092197	139 (aa)	-	A0A2I3TSK9
ENSPTRT00000084835	-	537	-	ENSPTRP00000092106	178 (aa)	-	A0A2I3TSZ4

Gene Model

Click here to download ENSPTRG00000002808's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000002808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000002808	EXOSC1	100	100.000	ENSG00000171311	EXOSC1	100	100.000	Homo_sapiens
ENSPTRG00000002808	EXOSC1	98	80.105	ENSAPOG00000007822	exosc1	98	80.105	Acanthochromis_polyacanthus
ENSPTRG00000002808	EXOSC1	100	97.436	ENSAMEG00000000129	EXOSC1	100	97.436	Ailuropoda_melanoleuca
ENSPTRG00000002808	EXOSC1	96	79.787	ENSACIG00000018956	exosc1	92	79.787	Amphilophus_citrinellus
ENSPTRG00000002808	EXOSC1	98	80.105	ENSAOCG00000010699	exosc1	98	80.105	Amphiprion_ocellaris
ENSPTRG00000002808	EXOSC1	91	78.395	ENSAPEG00000012690	exosc1	96	78.395	Amphiprion_percula
ENSPTRG00000002808	EXOSC1	98	79.581	ENSATEG00000018683	exosc1	98	79.581	Anabas_testudineus
ENSPTRG00000002808	EXOSC1	99	84.456	ENSACAG00000002101	EXOSC1	99	84.456	Anolis_carolinensis
ENSPTRG00000002808	EXOSC1	100	98.824	ENSANAG00000034669	EXOSC1	100	98.824	Aotus_nancymaae
ENSPTRG00000002808	EXOSC1	98	80.105	ENSACLG00000021243	exosc1	98	80.105	Astatotilapia_calliptera
ENSPTRG00000002808	EXOSC1	98	81.675	ENSAMXG00000011116	exosc1	98	81.675	Astyanax_mexicanus
ENSPTRG00000002808	EXOSC1	100	96.923	ENSBTAG00000012699	EXOSC1	100	96.923	Bos_taurus
ENSPTRG00000002808	EXOSC1	92	32.979	WBGene00012966	exos-1	90	32.979	Caenorhabditis_elegans
ENSPTRG00000002808	EXOSC1	100	98.701	ENSCJAG00000016586	EXOSC1	100	98.701	Callithrix_jacchus
ENSPTRG00000002808	EXOSC1	100	96.923	ENSCAFG00000009068	EXOSC1	94	96.923	Canis_familiaris
ENSPTRG00000002808	EXOSC1	100	96.923	ENSCAFG00020006002	EXOSC1	94	96.923	Canis_lupus_dingo
ENSPTRG00000002808	EXOSC1	100	96.923	ENSCHIG00000015253	EXOSC1	100	96.923	Capra_hircus
ENSPTRG00000002808	EXOSC1	100	97.059	ENSTSYG00000000760	EXOSC1	100	97.059	Carlito_syrichta
ENSPTRG00000002808	EXOSC1	100	96.923	ENSCPOG00000001173	EXOSC1	100	96.923	Cavia_porcellus
ENSPTRG00000002808	EXOSC1	100	62.353	ENSCCAG00000023986	EXOSC1	100	62.353	Cebus_capucinus
ENSPTRG00000002808	EXOSC1	100	100.000	ENSCATG00000034114	EXOSC1	100	100.000	Cercocebus_atys
ENSPTRG00000002808	EXOSC1	100	97.436	ENSCLAG00000002463	EXOSC1	100	97.436	Chinchilla_lanigera
ENSPTRG00000002808	EXOSC1	100	99.487	ENSCSAG00000005870	EXOSC1	100	99.487	Chlorocebus_sabaeus
ENSPTRG00000002808	EXOSC1	96	82.888	ENSCHOG00000006477	EXOSC1	100	82.888	Choloepus_hoffmanni
ENSPTRG00000002808	EXOSC1	81	79.646	ENSCPBG00000011949	EXOSC1	93	79.646	Chrysemys_picta_bellii
ENSPTRG00000002808	EXOSC1	95	56.150	ENSCING00000022734	-	89	56.150	Ciona_intestinalis
ENSPTRG00000002808	EXOSC1	95	57.754	ENSCSAVG00000010865	-	95	57.754	Ciona_savignyi
ENSPTRG00000002808	EXOSC1	100	100.000	ENSCANG00000034159	EXOSC1	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000002808	EXOSC1	100	96.753	ENSCGRG00001000335	Exosc1	100	96.753	Cricetulus_griseus_chok1gshd
ENSPTRG00000002808	EXOSC1	100	96.753	ENSCGRG00000011602	Exosc1	100	96.753	Cricetulus_griseus_crigri
ENSPTRG00000002808	EXOSC1	98	77.108	ENSCSEG00000007895	exosc1	95	77.108	Cynoglossus_semilaevis
ENSPTRG00000002808	EXOSC1	98	76.440	ENSCVAG00000016748	exosc1	98	76.440	Cyprinodon_variegatus
ENSPTRG00000002808	EXOSC1	98	80.628	ENSDARG00000059841	exosc1	98	80.628	Danio_rerio
ENSPTRG00000002808	EXOSC1	86	94.167	ENSDNOG00000007983	EXOSC1	100	97.297	Dasypus_novemcinctus
ENSPTRG00000002808	EXOSC1	100	96.410	ENSDORG00000016528	Exosc1	100	96.410	Dipodomys_ordii
ENSPTRG00000002808	EXOSC1	94	48.148	FBgn0032346	Csl4	92	48.148	Drosophila_melanogaster
ENSPTRG00000002808	EXOSC1	100	94.872	ENSETEG00000002469	-	100	94.872	Echinops_telfairi
ENSPTRG00000002808	EXOSC1	99	62.245	ENSEBUG00000008164	exosc1	98	62.245	Eptatretus_burgeri
ENSPTRG00000002808	EXOSC1	100	88.298	ENSEASG00005008684	EXOSC1	100	88.298	Equus_asinus_asinus
ENSPTRG00000002808	EXOSC1	100	82.734	ENSECAG00000010621	EXOSC1	84	82.734	Equus_caballus
ENSPTRG00000002808	EXOSC1	100	96.923	ENSEEUG00000005647	EXOSC1	100	96.923	Erinaceus_europaeus
ENSPTRG00000002808	EXOSC1	94	80.978	ENSELUG00000017369	exosc1	97	71.856	Esox_lucius
ENSPTRG00000002808	EXOSC1	100	98.235	ENSFCAG00000040563	EXOSC1	100	98.235	Felis_catus
ENSPTRG00000002808	EXOSC1	100	83.077	ENSFALG00000008450	EXOSC1	100	83.077	Ficedula_albicollis
ENSPTRG00000002808	EXOSC1	100	97.436	ENSFDAG00000000846	EXOSC1	100	97.436	Fukomys_damarensis
ENSPTRG00000002808	EXOSC1	98	76.440	ENSFHEG00000009154	exosc1	98	76.440	Fundulus_heteroclitus
ENSPTRG00000002808	EXOSC1	98	80.105	ENSGMOG00000008993	exosc1	98	80.105	Gadus_morhua
ENSPTRG00000002808	EXOSC1	100	82.353	ENSGALG00000039917	EXOSC1	100	86.301	Gallus_gallus
ENSPTRG00000002808	EXOSC1	98	76.963	ENSGAFG00000010265	exosc1	94	76.963	Gambusia_affinis
ENSPTRG00000002808	EXOSC1	98	80.105	ENSGACG00000018936	exosc1	98	80.105	Gasterosteus_aculeatus
ENSPTRG00000002808	EXOSC1	100	85.128	ENSGAGG00000019192	EXOSC1	100	85.128	Gopherus_agassizii
ENSPTRG00000002808	EXOSC1	100	98.824	ENSGGOG00000003099	EXOSC1	100	98.824	Gorilla_gorilla
ENSPTRG00000002808	EXOSC1	98	80.105	ENSHBUG00000017857	exosc1	98	80.105	Haplochromis_burtoni
ENSPTRG00000002808	EXOSC1	100	97.403	ENSHGLG00000016927	EXOSC1	100	97.403	Heterocephalus_glaber_female
ENSPTRG00000002808	EXOSC1	100	97.403	ENSHGLG00100012208	EXOSC1	100	97.403	Heterocephalus_glaber_male
ENSPTRG00000002808	EXOSC1	98	79.058	ENSHCOG00000019882	exosc1	98	79.058	Hippocampus_comes
ENSPTRG00000002808	EXOSC1	98	80.105	ENSIPUG00000007685	exosc1	98	80.105	Ictalurus_punctatus
ENSPTRG00000002808	EXOSC1	86	84.298	ENSSTOG00000029860	-	93	84.298	Ictidomys_tridecemlineatus
ENSPTRG00000002808	EXOSC1	100	97.436	ENSSTOG00000006615	EXOSC1	100	97.436	Ictidomys_tridecemlineatus
ENSPTRG00000002808	EXOSC1	100	96.410	ENSJJAG00000013311	Exosc1	100	96.410	Jaculus_jaculus
ENSPTRG00000002808	EXOSC1	98	78.125	ENSKMAG00000001202	exosc1	81	78.125	Kryptolebias_marmoratus
ENSPTRG00000002808	EXOSC1	98	79.581	ENSLBEG00000011448	exosc1	98	79.581	Labrus_bergylta
ENSPTRG00000002808	EXOSC1	97	75.641	ENSLOCG00000003776	exosc1	98	75.641	Lepisosteus_oculatus
ENSPTRG00000002808	EXOSC1	100	96.923	ENSLAFG00000015983	EXOSC1	100	96.923	Loxodonta_africana
ENSPTRG00000002808	EXOSC1	100	100.000	ENSMFAG00000001493	EXOSC1	100	100.000	Macaca_fascicularis
ENSPTRG00000002808	EXOSC1	100	100.000	ENSMMUG00000020028	EXOSC1	100	100.000	Macaca_mulatta
ENSPTRG00000002808	EXOSC1	100	100.000	ENSMNEG00000029816	EXOSC1	100	100.000	Macaca_nemestrina
ENSPTRG00000002808	EXOSC1	100	100.000	ENSMLEG00000027643	EXOSC1	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000002808	EXOSC1	98	80.628	ENSMAMG00000012200	exosc1	98	80.628	Mastacembelus_armatus
ENSPTRG00000002808	EXOSC1	98	80.105	ENSMZEG00005007042	exosc1	98	80.105	Maylandia_zebra
ENSPTRG00000002808	EXOSC1	100	96.471	ENSMAUG00000020462	-	100	96.471	Mesocricetus_auratus
ENSPTRG00000002808	EXOSC1	100	97.059	ENSMICG00000007664	EXOSC1	100	97.059	Microcebus_murinus
ENSPTRG00000002808	EXOSC1	97	89.474	ENSMOCG00000017124	-	97	89.474	Microtus_ochrogaster
ENSPTRG00000002808	EXOSC1	100	96.753	ENSMOCG00000006004	-	100	96.753	Microtus_ochrogaster
ENSPTRG00000002808	EXOSC1	99	77.124	ENSMMOG00000021403	exosc1	99	77.124	Mola_mola
ENSPTRG00000002808	EXOSC1	100	91.837	ENSMODG00000004213	EXOSC1	100	91.837	Monodelphis_domestica
ENSPTRG00000002808	EXOSC1	94	80.978	ENSMALG00000007061	exosc1	92	80.978	Monopterus_albus
ENSPTRG00000002808	EXOSC1	100	96.104	MGP_CAROLIEiJ_G0022959	Exosc1	100	96.104	Mus_caroli
ENSPTRG00000002808	EXOSC1	100	96.753	ENSMUSG00000034321	Exosc1	100	96.753	Mus_musculus
ENSPTRG00000002808	EXOSC1	100	96.753	MGP_PahariEiJ_G0014449	Exosc1	100	96.753	Mus_pahari
ENSPTRG00000002808	EXOSC1	100	96.104	MGP_SPRETEiJ_G0023880	Exosc1	100	96.104	Mus_spretus
ENSPTRG00000002808	EXOSC1	100	97.436	ENSMPUG00000017044	EXOSC1	100	97.436	Mustela_putorius_furo
ENSPTRG00000002808	EXOSC1	100	96.923	ENSMLUG00000009228	EXOSC1	100	96.923	Myotis_lucifugus
ENSPTRG00000002808	EXOSC1	100	94.872	ENSNGAG00000022033	Exosc1	100	94.872	Nannospalax_galili
ENSPTRG00000002808	EXOSC1	97	78.000	ENSNBRG00000024007	exosc1	97	78.000	Neolamprologus_brichardi
ENSPTRG00000002808	EXOSC1	100	100.000	ENSNLEG00000013872	EXOSC1	100	100.000	Nomascus_leucogenys
ENSPTRG00000002808	EXOSC1	83	90.435	ENSMEUG00000002246	EXOSC1	100	90.435	Notamacropus_eugenii
ENSPTRG00000002808	EXOSC1	100	95.385	ENSOPRG00000005065	EXOSC1	100	95.385	Ochotona_princeps
ENSPTRG00000002808	EXOSC1	100	96.923	ENSODEG00000016709	EXOSC1	100	96.923	Octodon_degus
ENSPTRG00000002808	EXOSC1	98	80.105	ENSONIG00000017683	exosc1	98	80.105	Oreochromis_niloticus
ENSPTRG00000002808	EXOSC1	68	93.043	ENSOANG00000006563	EXOSC1	100	90.476	Ornithorhynchus_anatinus
ENSPTRG00000002808	EXOSC1	100	95.918	ENSOCUG00000011898	-	100	95.918	Oryctolagus_cuniculus
ENSPTRG00000002808	EXOSC1	100	90.769	ENSOCUG00000026461	-	100	90.769	Oryctolagus_cuniculus
ENSPTRG00000002808	EXOSC1	98	78.646	ENSORLG00000011595	exosc1	98	78.646	Oryzias_latipes
ENSPTRG00000002808	EXOSC1	98	78.646	ENSORLG00020005831	exosc1	98	78.646	Oryzias_latipes_hni
ENSPTRG00000002808	EXOSC1	98	78.646	ENSORLG00015004317	exosc1	98	78.646	Oryzias_latipes_hsok
ENSPTRG00000002808	EXOSC1	97	65.318	ENSOMEG00000013907	exosc1	98	65.318	Oryzias_melastigma
ENSPTRG00000002808	EXOSC1	100	96.410	ENSOGAG00000016259	EXOSC1	100	96.410	Otolemur_garnettii
ENSPTRG00000002808	EXOSC1	100	96.410	ENSOARG00000010136	EXOSC1	100	96.410	Ovis_aries
ENSPTRG00000002808	EXOSC1	100	100.000	ENSPPAG00000039842	EXOSC1	100	100.000	Pan_paniscus
ENSPTRG00000002808	EXOSC1	100	98.235	ENSPPRG00000023366	EXOSC1	100	98.235	Panthera_pardus
ENSPTRG00000002808	EXOSC1	100	98.235	ENSPTIG00000017701	EXOSC1	100	98.235	Panthera_tigris_altaica
ENSPTRG00000002808	EXOSC1	100	100.000	ENSPANG00000021324	EXOSC1	100	100.000	Papio_anubis
ENSPTRG00000002808	EXOSC1	98	80.628	ENSPKIG00000016037	exosc1	98	80.628	Paramormyrops_kingsleyae
ENSPTRG00000002808	EXOSC1	75	82.192	ENSPSIG00000013571	EXOSC1	98	80.992	Pelodiscus_sinensis
ENSPTRG00000002808	EXOSC1	98	77.108	ENSPMGG00000014002	exosc1	98	77.108	Periophthalmus_magnuspinnatus
ENSPTRG00000002808	EXOSC1	100	96.753	ENSPEMG00000010710	-	100	96.753	Peromyscus_maniculatus_bairdii
ENSPTRG00000002808	EXOSC1	95	71.123	ENSPMAG00000000195	exosc1	95	71.123	Petromyzon_marinus
ENSPTRG00000002808	EXOSC1	100	92.821	ENSPCIG00000002210	EXOSC1	99	92.821	Phascolarctos_cinereus
ENSPTRG00000002808	EXOSC1	98	76.440	ENSPFOG00000006755	exosc1	94	76.440	Poecilia_formosa
ENSPTRG00000002808	EXOSC1	98	76.440	ENSPLAG00000005880	exosc1	98	76.440	Poecilia_latipinna
ENSPTRG00000002808	EXOSC1	98	76.440	ENSPMEG00000015598	exosc1	94	76.440	Poecilia_mexicana
ENSPTRG00000002808	EXOSC1	98	74.699	ENSPREG00000000405	exosc1	93	74.699	Poecilia_reticulata
ENSPTRG00000002808	EXOSC1	100	99.487	ENSPPYG00000002531	EXOSC1	100	99.487	Pongo_abelii
ENSPTRG00000002808	EXOSC1	100	96.410	ENSPCAG00000009135	EXOSC1	100	96.410	Procavia_capensis
ENSPTRG00000002808	EXOSC1	100	90.769	ENSPCOG00000027539	EXOSC1	100	90.769	Propithecus_coquereli
ENSPTRG00000002808	EXOSC1	100	97.436	ENSPVAG00000003372	EXOSC1	100	97.436	Pteropus_vampyrus
ENSPTRG00000002808	EXOSC1	98	80.105	ENSPNYG00000021745	exosc1	98	80.105	Pundamilia_nyererei
ENSPTRG00000002808	EXOSC1	98	80.628	ENSPNAG00000001944	exosc1	98	80.628	Pygocentrus_nattereri
ENSPTRG00000002808	EXOSC1	100	96.753	ENSRNOG00000048708	Exosc1	100	96.753	Rattus_norvegicus
ENSPTRG00000002808	EXOSC1	100	100.000	ENSRBIG00000035618	EXOSC1	100	100.000	Rhinopithecus_bieti
ENSPTRG00000002808	EXOSC1	100	100.000	ENSRROG00000032589	EXOSC1	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000002808	EXOSC1	56	47.959	YNL232W	CSL4	54	36.250	Saccharomyces_cerevisiae
ENSPTRG00000002808	EXOSC1	100	98.824	ENSSBOG00000000359	EXOSC1	100	98.824	Saimiri_boliviensis_boliviensis
ENSPTRG00000002808	EXOSC1	75	95.238	ENSSHAG00000018219	EXOSC1	100	95.238	Sarcophilus_harrisii
ENSPTRG00000002808	EXOSC1	98	77.844	ENSSFOG00015016289	-	98	78.421	Scleropages_formosus
ENSPTRG00000002808	EXOSC1	98	81.675	ENSSFOG00015009069	exosc1	98	81.675	Scleropages_formosus
ENSPTRG00000002808	EXOSC1	98	80.628	ENSSMAG00000003721	exosc1	98	80.628	Scophthalmus_maximus
ENSPTRG00000002808	EXOSC1	98	80.628	ENSSDUG00000002993	exosc1	98	80.628	Seriola_dumerili
ENSPTRG00000002808	EXOSC1	98	80.628	ENSSLDG00000025181	exosc1	98	80.628	Seriola_lalandi_dorsalis
ENSPTRG00000002808	EXOSC1	100	83.590	ENSSARG00000000162	EXOSC1	100	83.590	Sorex_araneus
ENSPTRG00000002808	EXOSC1	99	84.536	ENSSPUG00000012263	EXOSC1	99	84.536	Sphenodon_punctatus
ENSPTRG00000002808	EXOSC1	98	78.736	ENSSPAG00000016792	exosc1	82	78.736	Stegastes_partitus
ENSPTRG00000002808	EXOSC1	100	96.410	ENSSSCG00000010518	EXOSC1	91	96.410	Sus_scrofa
ENSPTRG00000002808	EXOSC1	98	81.250	ENSTGUG00000009692	EXOSC1	99	81.250	Taeniopygia_guttata
ENSPTRG00000002808	EXOSC1	97	74.074	ENSTRUG00000007706	exosc1	98	74.074	Takifugu_rubripes
ENSPTRG00000002808	EXOSC1	97	73.958	ENSTNIG00000014079	exosc1	97	73.958	Tetraodon_nigroviridis
ENSPTRG00000002808	EXOSC1	100	88.718	ENSTBEG00000006011	EXOSC1	100	88.718	Tupaia_belangeri
ENSPTRG00000002808	EXOSC1	94	97.283	ENSTTRG00000009887	EXOSC1	100	97.283	Tursiops_truncatus
ENSPTRG00000002808	EXOSC1	100	83.240	ENSUAMG00000010266	EXOSC1	100	83.240	Ursus_americanus
ENSPTRG00000002808	EXOSC1	100	83.240	ENSUMAG00000022002	EXOSC1	100	83.240	Ursus_maritimus
ENSPTRG00000002808	EXOSC1	100	96.923	ENSVVUG00000023192	EXOSC1	63	96.923	Vulpes_vulpes
ENSPTRG00000002808	EXOSC1	98	78.646	ENSXETG00000003434	exosc1	99	78.646	Xenopus_tropicalis
ENSPTRG00000002808	EXOSC1	71	84.167	ENSXCOG00000014499	exosc1	92	84.167	Xiphophorus_couchianus
ENSPTRG00000002808	EXOSC1	98	75.301	ENSXMAG00000023382	exosc1	93	75.301	Xiphophorus_maculatus