EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000002964 (Gene tree)
Gene ID: 466209
Gene Symbol: TRUB1
Alias: -
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 39474 bases
Position: chr10:116618429-116657902
Accession: 9779
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000005235	TruB_N	PF01509.18	5.6e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000005657	-	3419	XM_521611	ENSPTRP00000005235	349 (aa)	XP_521611	K7CFC2

Gene Model

Click here to download ENSPTRG00000002964's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000002964's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000002964	TRUB1	58	34.615	ENSPTRG00000052151	-	62	34.615
ENSPTRG00000002964	TRUB1	58	34.615	ENSPTRG00000021423	TRUB2	62	34.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000002964	TRUB1	100	99.427	ENSG00000165832	TRUB1	100	99.427	Homo_sapiens
ENSPTRG00000002964	TRUB1	70	68.571	ENSAPOG00000020565	trub1	89	68.293	Acanthochromis_polyacanthus
ENSPTRG00000002964	TRUB1	96	93.491	ENSAMEG00000014931	TRUB1	99	93.162	Ailuropoda_melanoleuca
ENSPTRG00000002964	TRUB1	70	62.602	ENSACIG00000003060	trub1	82	62.602	Amphilophus_citrinellus
ENSPTRG00000002964	TRUB1	70	68.571	ENSAOCG00000017188	trub1	89	68.293	Amphiprion_ocellaris
ENSPTRG00000002964	TRUB1	70	67.886	ENSAPEG00000015209	trub1	89	67.886	Amphiprion_percula
ENSPTRG00000002964	TRUB1	69	68.880	ENSATEG00000023291	trub1	86	68.880	Anabas_testudineus
ENSPTRG00000002964	TRUB1	79	76.000	ENSAPLG00000006808	TRUB1	99	76.000	Anas_platyrhynchos
ENSPTRG00000002964	TRUB1	77	71.269	ENSACAG00000009282	TRUB1	97	71.269	Anolis_carolinensis
ENSPTRG00000002964	TRUB1	100	96.581	ENSANAG00000022870	TRUB1	100	96.581	Aotus_nancymaae
ENSPTRG00000002964	TRUB1	72	67.063	ENSACLG00000000823	trub1	91	67.063	Astatotilapia_calliptera
ENSPTRG00000002964	TRUB1	77	65.926	ENSAMXG00000015845	trub1	90	65.926	Astyanax_mexicanus
ENSPTRG00000002964	TRUB1	98	92.690	ENSBTAG00000012955	TRUB1	99	92.023	Bos_taurus
ENSPTRG00000002964	TRUB1	100	96.866	ENSCJAG00000047815	TRUB1	100	96.866	Callithrix_jacchus
ENSPTRG00000002964	TRUB1	99	93.123	ENSCAFG00000011688	TRUB1	99	93.123	Canis_familiaris
ENSPTRG00000002964	TRUB1	99	93.410	ENSCAFG00020013237	TRUB1	99	93.410	Canis_lupus_dingo
ENSPTRG00000002964	TRUB1	98	92.982	ENSCHIG00000020884	TRUB1	99	92.571	Capra_hircus
ENSPTRG00000002964	TRUB1	100	90.598	ENSTSYG00000000446	TRUB1	100	91.738	Carlito_syrichta
ENSPTRG00000002964	TRUB1	72	84.646	ENSCAPG00000017088	TRUB1	100	84.646	Cavia_aperea
ENSPTRG00000002964	TRUB1	71	79.435	ENSCPOG00000030129	-	86	79.435	Cavia_porcellus
ENSPTRG00000002964	TRUB1	70	85.714	ENSCPOG00000040236	-	100	85.714	Cavia_porcellus
ENSPTRG00000002964	TRUB1	100	96.011	ENSCCAG00000028842	TRUB1	100	96.011	Cebus_capucinus
ENSPTRG00000002964	TRUB1	100	98.000	ENSCATG00000033431	TRUB1	100	98.000	Cercocebus_atys
ENSPTRG00000002964	TRUB1	70	89.388	ENSCLAG00000008664	TRUB1	100	89.388	Chinchilla_lanigera
ENSPTRG00000002964	TRUB1	100	98.286	ENSCSAG00000004891	TRUB1	100	98.286	Chlorocebus_sabaeus
ENSPTRG00000002964	TRUB1	99	77.971	ENSCHOG00000011931	TRUB1	99	77.971	Choloepus_hoffmanni
ENSPTRG00000002964	TRUB1	78	79.412	ENSCPBG00000003051	TRUB1	94	79.412	Chrysemys_picta_bellii
ENSPTRG00000002964	TRUB1	100	98.286	ENSCANG00000029445	TRUB1	100	98.286	Colobus_angolensis_palliatus
ENSPTRG00000002964	TRUB1	72	87.008	ENSCGRG00001016772	-	99	70.774	Cricetulus_griseus_chok1gshd
ENSPTRG00000002964	TRUB1	80	79.286	ENSCGRG00001010322	-	79	79.252	Cricetulus_griseus_chok1gshd
ENSPTRG00000002964	TRUB1	80	88.214	ENSCGRG00000010806	Trub1	99	78.223	Cricetulus_griseus_crigri
ENSPTRG00000002964	TRUB1	73	62.891	ENSCSEG00000011261	trub1	97	56.579	Cynoglossus_semilaevis
ENSPTRG00000002964	TRUB1	74	65.891	ENSCVAG00000008791	trub1	79	65.891	Cyprinodon_variegatus
ENSPTRG00000002964	TRUB1	75	66.920	ENSDARG00000053805	trub1	90	66.920	Danio_rerio
ENSPTRG00000002964	TRUB1	97	87.059	ENSDNOG00000001069	TRUB1	99	86.286	Dasypus_novemcinctus
ENSPTRG00000002964	TRUB1	99	89.398	ENSDORG00000010431	Trub1	99	88.539	Dipodomys_ordii
ENSPTRG00000002964	TRUB1	81	76.471	ENSETEG00000009183	TRUB1	81	77.451	Echinops_telfairi
ENSPTRG00000002964	TRUB1	96	93.452	ENSEASG00005014739	TRUB1	99	93.123	Equus_asinus_asinus
ENSPTRG00000002964	TRUB1	96	93.452	ENSECAG00000007177	TRUB1	99	93.123	Equus_caballus
ENSPTRG00000002964	TRUB1	99	76.536	ENSEEUG00000013993	TRUB1	99	77.933	Erinaceus_europaeus
ENSPTRG00000002964	TRUB1	70	69.796	ENSELUG00000000502	trub1	86	69.796	Esox_lucius
ENSPTRG00000002964	TRUB1	96	93.731	ENSFCAG00000031927	TRUB1	99	93.391	Felis_catus
ENSPTRG00000002964	TRUB1	66	78.788	ENSFALG00000002232	TRUB1	89	78.788	Ficedula_albicollis
ENSPTRG00000002964	TRUB1	70	87.243	ENSFDAG00000008140	TRUB1	99	87.243	Fukomys_damarensis
ENSPTRG00000002964	TRUB1	70	66.531	ENSFHEG00000004016	trub1	84	66.531	Fundulus_heteroclitus
ENSPTRG00000002964	TRUB1	78	75.368	ENSGALG00000009091	TRUB1	97	74.528	Gallus_gallus
ENSPTRG00000002964	TRUB1	68	65.272	ENSGAFG00000009193	trub1	86	64.344	Gambusia_affinis
ENSPTRG00000002964	TRUB1	56	68.205	ENSGACG00000015387	trub1	96	68.205	Gasterosteus_aculeatus
ENSPTRG00000002964	TRUB1	83	77.586	ENSGAGG00000009758	TRUB1	81	78.169	Gopherus_agassizii
ENSPTRG00000002964	TRUB1	100	99.140	ENSGGOG00000004583	TRUB1	100	99.140	Gorilla_gorilla
ENSPTRG00000002964	TRUB1	72	67.063	ENSHBUG00000016787	trub1	91	67.063	Haplochromis_burtoni
ENSPTRG00000002964	TRUB1	99	86.819	ENSHGLG00000015314	TRUB1	99	86.819	Heterocephalus_glaber_female
ENSPTRG00000002964	TRUB1	70	85.714	ENSHGLG00100009183	TRUB1	100	85.714	Heterocephalus_glaber_male
ENSPTRG00000002964	TRUB1	70	68.571	ENSHCOG00000017877	trub1	89	68.571	Hippocampus_comes
ENSPTRG00000002964	TRUB1	80	64.875	ENSIPUG00000017559	trub1	98	64.875	Ictalurus_punctatus
ENSPTRG00000002964	TRUB1	86	94.684	ENSSTOG00000003641	TRUB1	99	88.825	Ictidomys_tridecemlineatus
ENSPTRG00000002964	TRUB1	99	84.527	ENSJJAG00000011800	Trub1	99	84.241	Jaculus_jaculus
ENSPTRG00000002964	TRUB1	75	64.419	ENSKMAG00000006232	trub1	94	64.419	Kryptolebias_marmoratus
ENSPTRG00000002964	TRUB1	76	64.906	ENSLBEG00000026722	trub1	92	64.906	Labrus_bergylta
ENSPTRG00000002964	TRUB1	79	73.551	ENSLACG00000014885	TRUB1	92	73.551	Latimeria_chalumnae
ENSPTRG00000002964	TRUB1	78	70.696	ENSLOCG00000012979	trub1	93	70.696	Lepisosteus_oculatus
ENSPTRG00000002964	TRUB1	100	79.330	ENSLAFG00000015452	TRUB1	100	79.888	Loxodonta_africana
ENSPTRG00000002964	TRUB1	100	98.000	ENSMFAG00000031767	TRUB1	100	98.000	Macaca_fascicularis
ENSPTRG00000002964	TRUB1	100	98.286	ENSMMUG00000001902	TRUB1	100	98.286	Macaca_mulatta
ENSPTRG00000002964	TRUB1	100	93.714	ENSMNEG00000044646	TRUB1	100	93.714	Macaca_nemestrina
ENSPTRG00000002964	TRUB1	100	98.000	ENSMLEG00000042655	TRUB1	100	98.000	Mandrillus_leucophaeus
ENSPTRG00000002964	TRUB1	72	67.063	ENSMZEG00005024095	trub1	91	67.063	Maylandia_zebra
ENSPTRG00000002964	TRUB1	75	76.336	ENSMGAG00000011135	TRUB1	90	76.336	Meleagris_gallopavo
ENSPTRG00000002964	TRUB1	85	84.899	ENSMAUG00000011101	Trub1	99	78.223	Mesocricetus_auratus
ENSPTRG00000002964	TRUB1	99	95.415	ENSMICG00000016324	TRUB1	99	95.415	Microcebus_murinus
ENSPTRG00000002964	TRUB1	93	81.763	ENSMOCG00000017759	Trub1	99	79.083	Microtus_ochrogaster
ENSPTRG00000002964	TRUB1	82	82.867	ENSMODG00000009676	TRUB1	81	81.081	Monodelphis_domestica
ENSPTRG00000002964	TRUB1	99	81.089	MGP_CAROLIEiJ_G0023100	Trub1	99	81.089	Mus_caroli
ENSPTRG00000002964	TRUB1	99	79.943	ENSMUSG00000025086	Trub1	99	79.943	Mus_musculus
ENSPTRG00000002964	TRUB1	99	81.089	MGP_PahariEiJ_G0014588	Trub1	99	81.089	Mus_pahari
ENSPTRG00000002964	TRUB1	99	80.229	MGP_SPRETEiJ_G0024021	Trub1	99	80.229	Mus_spretus
ENSPTRG00000002964	TRUB1	96	94.940	ENSMPUG00000003556	TRUB1	99	94.556	Mustela_putorius_furo
ENSPTRG00000002964	TRUB1	96	88.358	ENSMLUG00000017686	TRUB1	100	87.179	Myotis_lucifugus
ENSPTRG00000002964	TRUB1	99	86.533	ENSNGAG00000018682	Trub1	99	86.533	Nannospalax_galili
ENSPTRG00000002964	TRUB1	70	68.293	ENSNBRG00000023393	trub1	88	68.293	Neolamprologus_brichardi
ENSPTRG00000002964	TRUB1	100	98.854	ENSNLEG00000016345	TRUB1	100	98.854	Nomascus_leucogenys
ENSPTRG00000002964	TRUB1	58	90.547	ENSMEUG00000006603	TRUB1	78	87.678	Notamacropus_eugenii
ENSPTRG00000002964	TRUB1	86	85.714	ENSOPRG00000009371	TRUB1	99	79.487	Ochotona_princeps
ENSPTRG00000002964	TRUB1	99	85.100	ENSODEG00000010854	TRUB1	99	85.100	Octodon_degus
ENSPTRG00000002964	TRUB1	70	67.480	ENSONIG00000007249	trub1	89	67.480	Oreochromis_niloticus
ENSPTRG00000002964	TRUB1	78	80.292	ENSOANG00000001556	TRUB1	93	78.092	Ornithorhynchus_anatinus
ENSPTRG00000002964	TRUB1	99	83.668	ENSOCUG00000009456	TRUB1	99	83.668	Oryctolagus_cuniculus
ENSPTRG00000002964	TRUB1	76	65.152	ENSORLG00000029719	trub1	92	65.152	Oryzias_latipes
ENSPTRG00000002964	TRUB1	76	64.773	ENSORLG00020016767	trub1	91	64.773	Oryzias_latipes_hni
ENSPTRG00000002964	TRUB1	76	64.773	ENSORLG00015014728	trub1	92	64.773	Oryzias_latipes_hsok
ENSPTRG00000002964	TRUB1	74	66.409	ENSOMEG00000014556	trub1	89	66.797	Oryzias_melastigma
ENSPTRG00000002964	TRUB1	99	93.983	ENSOGAG00000015895	TRUB1	99	93.983	Otolemur_garnettii
ENSPTRG00000002964	TRUB1	84	94.040	ENSOARG00000015591	TRUB1	99	87.360	Ovis_aries
ENSPTRG00000002964	TRUB1	100	100.000	ENSPPAG00000043645	TRUB1	100	100.000	Pan_paniscus
ENSPTRG00000002964	TRUB1	96	93.134	ENSPPRG00000007096	TRUB1	99	92.816	Panthera_pardus
ENSPTRG00000002964	TRUB1	96	93.433	ENSPTIG00000006378	TRUB1	99	93.103	Panthera_tigris_altaica
ENSPTRG00000002964	TRUB1	100	98.000	ENSPANG00000020712	TRUB1	100	98.000	Papio_anubis
ENSPTRG00000002964	TRUB1	78	77.574	ENSPSIG00000012877	TRUB1	93	77.574	Pelodiscus_sinensis
ENSPTRG00000002964	TRUB1	70	66.531	ENSPMGG00000000075	trub1	88	66.531	Periophthalmus_magnuspinnatus
ENSPTRG00000002964	TRUB1	86	85.333	ENSPEMG00000011156	Trub1	99	78.223	Peromyscus_maniculatus_bairdii
ENSPTRG00000002964	TRUB1	82	82.168	ENSPCIG00000009729	TRUB1	79	81.164	Phascolarctos_cinereus
ENSPTRG00000002964	TRUB1	70	66.122	ENSPFOG00000009950	trub1	90	66.122	Poecilia_formosa
ENSPTRG00000002964	TRUB1	70	66.122	ENSPLAG00000013855	trub1	86	66.122	Poecilia_latipinna
ENSPTRG00000002964	TRUB1	70	66.122	ENSPMEG00000009064	trub1	88	66.122	Poecilia_mexicana
ENSPTRG00000002964	TRUB1	70	66.939	ENSPREG00000003343	trub1	88	66.939	Poecilia_reticulata
ENSPTRG00000002964	TRUB1	100	99.140	ENSPPYG00000002676	TRUB1	100	99.140	Pongo_abelii
ENSPTRG00000002964	TRUB1	100	75.568	ENSPCAG00000008427	TRUB1	100	76.136	Procavia_capensis
ENSPTRG00000002964	TRUB1	99	90.831	ENSPCOG00000024360	TRUB1	99	90.831	Propithecus_coquereli
ENSPTRG00000002964	TRUB1	76	92.424	ENSPVAG00000007575	TRUB1	100	92.424	Pteropus_vampyrus
ENSPTRG00000002964	TRUB1	72	67.063	ENSPNYG00000018614	trub1	91	67.063	Pundamilia_nyererei
ENSPTRG00000002964	TRUB1	74	59.615	ENSPNAG00000006881	trub1	88	58.456	Pygocentrus_nattereri
ENSPTRG00000002964	TRUB1	99	81.662	ENSRNOG00000017321	Trub1	99	81.662	Rattus_norvegicus
ENSPTRG00000002964	TRUB1	100	88.000	ENSRBIG00000033423	TRUB1	100	88.000	Rhinopithecus_bieti
ENSPTRG00000002964	TRUB1	100	97.714	ENSRROG00000033902	TRUB1	100	97.714	Rhinopithecus_roxellana
ENSPTRG00000002964	TRUB1	100	96.296	ENSSBOG00000024237	TRUB1	100	96.296	Saimiri_boliviensis_boliviensis
ENSPTRG00000002964	TRUB1	72	80.859	ENSSHAG00000009346	TRUB1	86	80.859	Sarcophilus_harrisii
ENSPTRG00000002964	TRUB1	70	70.370	ENSSFOG00015022124	trub1	83	70.370	Scleropages_formosus
ENSPTRG00000002964	TRUB1	70	68.699	ENSSMAG00000001020	trub1	88	68.699	Scophthalmus_maximus
ENSPTRG00000002964	TRUB1	69	69.167	ENSSDUG00000016414	trub1	88	69.106	Seriola_dumerili
ENSPTRG00000002964	TRUB1	69	69.583	ENSSLDG00000015486	trub1	88	69.512	Seriola_lalandi_dorsalis
ENSPTRG00000002964	TRUB1	85	75.084	ENSSPUG00000001642	TRUB1	96	77.500	Sphenodon_punctatus
ENSPTRG00000002964	TRUB1	76	66.288	ENSSPAG00000001217	trub1	94	66.288	Stegastes_partitus
ENSPTRG00000002964	TRUB1	99	87.966	ENSSSCG00000010653	TRUB1	99	87.966	Sus_scrofa
ENSPTRG00000002964	TRUB1	77	76.296	ENSTGUG00000010971	TRUB1	97	76.103	Taeniopygia_guttata
ENSPTRG00000002964	TRUB1	72	77.470	ENSTBEG00000002880	TRUB1	99	77.470	Tupaia_belangeri
ENSPTRG00000002964	TRUB1	72	90.837	ENSTTRG00000005767	TRUB1	100	89.773	Tursiops_truncatus
ENSPTRG00000002964	TRUB1	96	94.940	ENSUAMG00000024876	TRUB1	99	94.269	Ursus_americanus
ENSPTRG00000002964	TRUB1	84	97.288	ENSUMAG00000002411	TRUB1	99	90.258	Ursus_maritimus
ENSPTRG00000002964	TRUB1	99	92.837	ENSVPAG00000005507	TRUB1	99	92.837	Vicugna_pacos
ENSPTRG00000002964	TRUB1	99	91.691	ENSVVUG00000010085	TRUB1	83	91.977	Vulpes_vulpes
ENSPTRG00000002964	TRUB1	77	66.418	ENSXETG00000023828	trub1	97	66.418	Xenopus_tropicalis
ENSPTRG00000002964	TRUB1	70	65.021	ENSXCOG00000017847	trub1	86	65.021	Xiphophorus_couchianus
ENSPTRG00000002964	TRUB1	70	65.306	ENSXMAG00000014701	trub1	88	65.306	Xiphophorus_maculatus