EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000003485 (Gene tree)
Gene ID: 451108
Gene Symbol: CSTF3
Alias: -
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 74690 bases
Position: chr11:33184653-33259342
Accession: 10181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000006051	Suf	PF05843.14	4.7e-84	1	1
ENSPTRP00000076304	Suf	PF05843.14	7.4e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000094408	-	2106	-	ENSPTRP00000076304	701 (aa)	-	A0A2I3SHE4
ENSPTRT00000006564	-	2154	XM_508355	ENSPTRP00000006051	717 (aa)	XP_508355	H2Q3D6
ENSPTRT00000085279	-	558	-	ENSPTRP00000069654	185 (aa)	-	A0A2I3RYG8

Gene Model

Click here to download ENSPTRG00000003485's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000003485's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000003485	CSTF3	100	100.000	ENSG00000176102	CSTF3	100	100.000	Homo_sapiens
ENSPTRG00000003485	CSTF3	100	91.365	ENSAPOG00000014054	cstf3	100	91.365	Acanthochromis_polyacanthus
ENSPTRG00000003485	CSTF3	99	99.859	ENSAMEG00000007187	CSTF3	98	99.859	Ailuropoda_melanoleuca
ENSPTRG00000003485	CSTF3	89	84.320	ENSACIG00000005539	cstf3	100	86.080	Amphilophus_citrinellus
ENSPTRG00000003485	CSTF3	100	91.086	ENSAOCG00000010930	cstf3	100	91.086	Amphiprion_ocellaris
ENSPTRG00000003485	CSTF3	100	91.086	ENSAPEG00000007903	cstf3	100	91.086	Amphiprion_percula
ENSPTRG00000003485	CSTF3	100	91.226	ENSATEG00000000190	cstf3	100	91.226	Anabas_testudineus
ENSPTRG00000003485	CSTF3	99	98.023	ENSAPLG00000007217	CSTF3	100	98.023	Anas_platyrhynchos
ENSPTRG00000003485	CSTF3	100	95.682	ENSACAG00000002823	CSTF3	100	95.682	Anolis_carolinensis
ENSPTRG00000003485	CSTF3	100	100.000	ENSANAG00000020699	CSTF3	100	100.000	Aotus_nancymaae
ENSPTRG00000003485	CSTF3	98	91.773	ENSACLG00000007820	cstf3	100	91.086	Astatotilapia_calliptera
ENSPTRG00000003485	CSTF3	100	90.669	ENSAMXG00000014198	cstf3	100	90.947	Astyanax_mexicanus
ENSPTRG00000003485	CSTF3	100	100.000	ENSBTAG00000008617	CSTF3	100	100.000	Bos_taurus
ENSPTRG00000003485	CSTF3	97	49.313	WBGene00006307	suf-1	99	49.313	Caenorhabditis_elegans
ENSPTRG00000003485	CSTF3	100	100.000	ENSCJAG00000005533	CSTF3	100	100.000	Callithrix_jacchus
ENSPTRG00000003485	CSTF3	100	99.861	ENSCAFG00000007264	CSTF3	100	99.861	Canis_familiaris
ENSPTRG00000003485	CSTF3	99	100.000	ENSCAFG00020002715	CSTF3	99	100.000	Canis_lupus_dingo
ENSPTRG00000003485	CSTF3	98	98.435	ENSCHIG00000016418	CSTF3	100	100.000	Capra_hircus
ENSPTRG00000003485	CSTF3	99	99.577	ENSTSYG00000000451	CSTF3	100	99.577	Carlito_syrichta
ENSPTRG00000003485	CSTF3	83	96.591	ENSCAPG00000010958	CSTF3	98	96.591	Cavia_aperea
ENSPTRG00000003485	CSTF3	100	99.582	ENSCPOG00000005545	CSTF3	100	99.582	Cavia_porcellus
ENSPTRG00000003485	CSTF3	100	100.000	ENSCCAG00000024790	CSTF3	100	100.000	Cebus_capucinus
ENSPTRG00000003485	CSTF3	100	100.000	ENSCATG00000007080	CSTF3	100	100.000	Cercocebus_atys
ENSPTRG00000003485	CSTF3	100	100.000	ENSCLAG00000016179	CSTF3	100	100.000	Chinchilla_lanigera
ENSPTRG00000003485	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSPTRG00000003485	CSTF3	100	97.354	ENSCPBG00000006753	CSTF3	100	97.354	Chrysemys_picta_bellii
ENSPTRG00000003485	CSTF3	99	62.098	ENSCING00000006401	-	98	62.098	Ciona_intestinalis
ENSPTRG00000003485	CSTF3	98	61.785	ENSCSAVG00000004851	-	100	61.785	Ciona_savignyi
ENSPTRG00000003485	CSTF3	100	100.000	ENSCANG00000035468	CSTF3	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000003485	CSTF3	100	99.303	ENSCGRG00001014773	Cstf3	100	99.303	Cricetulus_griseus_chok1gshd
ENSPTRG00000003485	CSTF3	100	99.303	ENSCGRG00000004142	Cstf3	100	99.303	Cricetulus_griseus_crigri
ENSPTRG00000003485	CSTF3	100	91.074	ENSCSEG00000014283	cstf3	100	91.074	Cynoglossus_semilaevis
ENSPTRG00000003485	CSTF3	100	90.251	ENSCVAG00000019739	cstf3	100	90.251	Cyprinodon_variegatus
ENSPTRG00000003485	CSTF3	100	90.934	ENSDARG00000018904	cstf3	100	90.934	Danio_rerio
ENSPTRG00000003485	CSTF3	99	99.020	ENSDNOG00000007366	CSTF3	99	99.020	Dasypus_novemcinctus
ENSPTRG00000003485	CSTF3	99	92.102	ENSDORG00000005898	Cstf3	99	92.102	Dipodomys_ordii
ENSPTRG00000003485	CSTF3	98	57.025	FBgn0003559	su(f)	98	57.025	Drosophila_melanogaster
ENSPTRG00000003485	CSTF3	90	94.237	ENSETEG00000017097	CSTF3	90	94.237	Echinops_telfairi
ENSPTRG00000003485	CSTF3	84	74.050	ENSEBUG00000015459	cstf3	96	74.050	Eptatretus_burgeri
ENSPTRG00000003485	CSTF3	98	99.857	ENSEASG00005019884	CSTF3	100	99.857	Equus_asinus_asinus
ENSPTRG00000003485	CSTF3	98	99.857	ENSECAG00000023338	CSTF3	100	99.857	Equus_caballus
ENSPTRG00000003485	CSTF3	100	94.142	ENSEEUG00000015167	CSTF3	100	94.142	Erinaceus_europaeus
ENSPTRG00000003485	CSTF3	100	89.679	ENSELUG00000023393	cstf3	100	89.679	Esox_lucius
ENSPTRG00000003485	CSTF3	100	99.721	ENSFCAG00000030711	CSTF3	100	99.721	Felis_catus
ENSPTRG00000003485	CSTF3	93	98.649	ENSFALG00000010764	CSTF3	100	96.928	Ficedula_albicollis
ENSPTRG00000003485	CSTF3	100	99.861	ENSFDAG00000012082	CSTF3	100	99.861	Fukomys_damarensis
ENSPTRG00000003485	CSTF3	100	90.390	ENSFHEG00000020623	cstf3	100	90.390	Fundulus_heteroclitus
ENSPTRG00000003485	CSTF3	100	89.430	ENSGMOG00000012275	cstf3	100	89.430	Gadus_morhua
ENSPTRG00000003485	CSTF3	100	98.050	ENSGALG00000011685	CSTF3	100	98.050	Gallus_gallus
ENSPTRG00000003485	CSTF3	100	90.669	ENSGAFG00000002181	cstf3	100	90.669	Gambusia_affinis
ENSPTRG00000003485	CSTF3	100	90.529	ENSGACG00000015997	cstf3	100	90.529	Gasterosteus_aculeatus
ENSPTRG00000003485	CSTF3	100	97.214	ENSGAGG00000006200	CSTF3	100	97.214	Gopherus_agassizii
ENSPTRG00000003485	CSTF3	100	97.004	ENSGGOG00000026591	CSTF3	100	97.004	Gorilla_gorilla
ENSPTRG00000003485	CSTF3	98	91.773	ENSHBUG00000016656	cstf3	100	91.086	Haplochromis_burtoni
ENSPTRG00000003485	CSTF3	100	99.721	ENSHGLG00000017834	CSTF3	100	99.721	Heterocephalus_glaber_female
ENSPTRG00000003485	CSTF3	100	99.721	ENSHGLG00100018042	CSTF3	100	99.721	Heterocephalus_glaber_male
ENSPTRG00000003485	CSTF3	98	89.377	ENSHCOG00000015218	cstf3	100	88.858	Hippocampus_comes
ENSPTRG00000003485	CSTF3	100	90.237	ENSIPUG00000013170	CSTF3	100	90.237	Ictalurus_punctatus
ENSPTRG00000003485	CSTF3	100	100.000	ENSSTOG00000013306	CSTF3	100	100.000	Ictidomys_tridecemlineatus
ENSPTRG00000003485	CSTF3	99	87.448	ENSJJAG00000018430	Cstf3	99	87.448	Jaculus_jaculus
ENSPTRG00000003485	CSTF3	100	89.833	ENSKMAG00000010916	cstf3	100	89.833	Kryptolebias_marmoratus
ENSPTRG00000003485	CSTF3	100	90.111	ENSLBEG00000002306	cstf3	100	90.111	Labrus_bergylta
ENSPTRG00000003485	CSTF3	100	93.863	ENSLACG00000017296	CSTF3	100	93.863	Latimeria_chalumnae
ENSPTRG00000003485	CSTF3	100	93.305	ENSLOCG00000004415	cstf3	100	93.305	Lepisosteus_oculatus
ENSPTRG00000003485	CSTF3	100	99.582	ENSLAFG00000008712	CSTF3	100	99.582	Loxodonta_africana
ENSPTRG00000003485	CSTF3	100	100.000	ENSMFAG00000029516	CSTF3	100	100.000	Macaca_fascicularis
ENSPTRG00000003485	CSTF3	100	100.000	ENSMMUG00000002542	CSTF3	100	100.000	Macaca_mulatta
ENSPTRG00000003485	CSTF3	100	100.000	ENSMNEG00000021807	CSTF3	100	100.000	Macaca_nemestrina
ENSPTRG00000003485	CSTF3	100	100.000	ENSMLEG00000039594	CSTF3	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000003485	CSTF3	100	91.086	ENSMAMG00000020423	cstf3	100	91.086	Mastacembelus_armatus
ENSPTRG00000003485	CSTF3	98	91.773	ENSMZEG00005012082	cstf3	100	91.086	Maylandia_zebra
ENSPTRG00000003485	CSTF3	100	98.189	ENSMGAG00000001383	CSTF3	100	98.189	Meleagris_gallopavo
ENSPTRG00000003485	CSTF3	100	99.163	ENSMAUG00000002487	Cstf3	100	99.163	Mesocricetus_auratus
ENSPTRG00000003485	CSTF3	100	99.721	ENSMICG00000004784	CSTF3	100	99.721	Microcebus_murinus
ENSPTRG00000003485	CSTF3	100	99.303	ENSMOCG00000017583	Cstf3	100	99.303	Microtus_ochrogaster
ENSPTRG00000003485	CSTF3	99	91.127	ENSMMOG00000016026	cstf3	95	91.127	Mola_mola
ENSPTRG00000003485	CSTF3	100	84.100	ENSMODG00000025205	-	100	84.100	Monodelphis_domestica
ENSPTRG00000003485	CSTF3	100	98.745	ENSMODG00000009745	-	100	98.745	Monodelphis_domestica
ENSPTRG00000003485	CSTF3	100	90.808	ENSMALG00000012050	cstf3	100	90.808	Monopterus_albus
ENSPTRG00000003485	CSTF3	100	99.303	MGP_CAROLIEiJ_G0024026	Cstf3	100	99.303	Mus_caroli
ENSPTRG00000003485	CSTF3	100	99.303	ENSMUSG00000027176	Cstf3	100	99.303	Mus_musculus
ENSPTRG00000003485	CSTF3	100	99.303	MGP_PahariEiJ_G0025464	Cstf3	100	99.303	Mus_pahari
ENSPTRG00000003485	CSTF3	100	99.303	MGP_SPRETEiJ_G0024939	Cstf3	100	99.303	Mus_spretus
ENSPTRG00000003485	CSTF3	100	99.721	ENSMPUG00000011457	CSTF3	100	99.721	Mustela_putorius_furo
ENSPTRG00000003485	CSTF3	99	99.437	ENSMLUG00000003073	-	99	99.437	Myotis_lucifugus
ENSPTRG00000003485	CSTF3	100	96.095	ENSMLUG00000026022	-	100	96.095	Myotis_lucifugus
ENSPTRG00000003485	CSTF3	100	99.303	ENSNGAG00000010677	Cstf3	100	99.303	Nannospalax_galili
ENSPTRG00000003485	CSTF3	89	89.280	ENSNBRG00000007345	cstf3	100	91.040	Neolamprologus_brichardi
ENSPTRG00000003485	CSTF3	100	100.000	ENSNLEG00000017901	CSTF3	100	100.000	Nomascus_leucogenys
ENSPTRG00000003485	CSTF3	73	95.029	ENSMEUG00000005640	-	100	95.029	Notamacropus_eugenii
ENSPTRG00000003485	CSTF3	67	100.000	ENSOPRG00000000199	-	66	100.000	Ochotona_princeps
ENSPTRG00000003485	CSTF3	100	99.721	ENSODEG00000016737	-	100	99.721	Octodon_degus
ENSPTRG00000003485	CSTF3	99	80.086	ENSODEG00000006311	-	97	87.107	Octodon_degus
ENSPTRG00000003485	CSTF3	98	91.773	ENSONIG00000005563	cstf3	100	91.086	Oreochromis_niloticus
ENSPTRG00000003485	CSTF3	90	97.077	ENSOANG00000015140	CSTF3	100	97.077	Ornithorhynchus_anatinus
ENSPTRG00000003485	CSTF3	100	99.582	ENSOCUG00000015417	CSTF3	100	99.582	Oryctolagus_cuniculus
ENSPTRG00000003485	CSTF3	100	90.934	ENSORLG00000009762	cstf3	100	90.934	Oryzias_latipes
ENSPTRG00000003485	CSTF3	100	90.934	ENSORLG00020005540	cstf3	100	90.934	Oryzias_latipes_hni
ENSPTRG00000003485	CSTF3	100	90.795	ENSORLG00015003551	cstf3	100	90.795	Oryzias_latipes_hsok
ENSPTRG00000003485	CSTF3	100	90.098	ENSOMEG00000003848	cstf3	100	90.098	Oryzias_melastigma
ENSPTRG00000003485	CSTF3	100	99.306	ENSOGAG00000010229	CSTF3	100	99.306	Otolemur_garnettii
ENSPTRG00000003485	CSTF3	90	99.844	ENSOARG00000017271	CSTF3	99	99.844	Ovis_aries
ENSPTRG00000003485	CSTF3	100	99.429	ENSPPAG00000027358	CSTF3	100	99.429	Pan_paniscus
ENSPTRG00000003485	CSTF3	100	99.721	ENSPPRG00000016852	CSTF3	100	99.721	Panthera_pardus
ENSPTRG00000003485	CSTF3	100	99.721	ENSPTIG00000008716	CSTF3	100	99.721	Panthera_tigris_altaica
ENSPTRG00000003485	CSTF3	100	100.000	ENSPANG00000013722	CSTF3	100	100.000	Papio_anubis
ENSPTRG00000003485	CSTF3	100	92.469	ENSPKIG00000023648	cstf3	100	92.469	Paramormyrops_kingsleyae
ENSPTRG00000003485	CSTF3	100	96.936	ENSPSIG00000009173	CSTF3	100	96.936	Pelodiscus_sinensis
ENSPTRG00000003485	CSTF3	76	94.698	ENSPMGG00000000164	cstf3	99	94.698	Periophthalmus_magnuspinnatus
ENSPTRG00000003485	CSTF3	100	99.163	ENSPEMG00000011481	Cstf3	100	99.163	Peromyscus_maniculatus_bairdii
ENSPTRG00000003485	CSTF3	99	80.337	ENSPMAG00000007282	cstf3	99	80.337	Petromyzon_marinus
ENSPTRG00000003485	CSTF3	100	81.198	ENSPCIG00000030419	-	90	81.894	Phascolarctos_cinereus
ENSPTRG00000003485	CSTF3	99	96.051	ENSPCIG00000026406	-	100	98.240	Phascolarctos_cinereus
ENSPTRG00000003485	CSTF3	100	90.808	ENSPFOG00000017239	cstf3	100	90.808	Poecilia_formosa
ENSPTRG00000003485	CSTF3	100	90.808	ENSPLAG00000009456	cstf3	100	90.808	Poecilia_latipinna
ENSPTRG00000003485	CSTF3	100	90.808	ENSPMEG00000010320	cstf3	100	90.808	Poecilia_mexicana
ENSPTRG00000003485	CSTF3	100	90.808	ENSPREG00000013549	cstf3	100	90.808	Poecilia_reticulata
ENSPTRG00000003485	CSTF3	100	100.000	ENSPPYG00000003375	CSTF3	100	100.000	Pongo_abelii
ENSPTRG00000003485	CSTF3	71	100.000	ENSPCAG00000008025	-	71	100.000	Procavia_capensis
ENSPTRG00000003485	CSTF3	100	94.561	ENSPCOG00000014417	CSTF3	100	94.561	Propithecus_coquereli
ENSPTRG00000003485	CSTF3	100	94.561	ENSPVAG00000002350	CSTF3	100	94.561	Pteropus_vampyrus
ENSPTRG00000003485	CSTF3	98	91.773	ENSPNYG00000018259	cstf3	100	91.086	Pundamilia_nyererei
ENSPTRG00000003485	CSTF3	100	92.050	ENSPNAG00000020182	cstf3	100	92.050	Pygocentrus_nattereri
ENSPTRG00000003485	CSTF3	89	97.440	ENSRNOG00000012089	Cstf3	100	99.200	Rattus_norvegicus
ENSPTRG00000003485	CSTF3	99	98.590	ENSRBIG00000044258	CSTF3	100	100.000	Rhinopithecus_bieti
ENSPTRG00000003485	CSTF3	100	100.000	ENSRROG00000043450	CSTF3	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000003485	CSTF3	100	100.000	ENSSBOG00000024764	CSTF3	100	100.000	Saimiri_boliviensis_boliviensis
ENSPTRG00000003485	CSTF3	100	85.495	ENSSHAG00000003135	-	99	85.495	Sarcophilus_harrisii
ENSPTRG00000003485	CSTF3	100	97.908	ENSSHAG00000018128	-	100	97.908	Sarcophilus_harrisii
ENSPTRG00000003485	CSTF3	100	92.190	ENSSFOG00015022133	cstf3	100	92.190	Scleropages_formosus
ENSPTRG00000003485	CSTF3	100	90.251	ENSSMAG00000002197	cstf3	100	90.251	Scophthalmus_maximus
ENSPTRG00000003485	CSTF3	100	91.086	ENSSDUG00000020426	cstf3	100	91.086	Seriola_dumerili
ENSPTRG00000003485	CSTF3	100	91.226	ENSSLDG00000025649	cstf3	100	91.226	Seriola_lalandi_dorsalis
ENSPTRG00000003485	CSTF3	100	99.582	ENSSARG00000000391	CSTF3	100	99.582	Sorex_araneus
ENSPTRG00000003485	CSTF3	96	97.106	ENSSPUG00000010546	CSTF3	100	97.106	Sphenodon_punctatus
ENSPTRG00000003485	CSTF3	100	91.226	ENSSPAG00000004958	cstf3	100	91.226	Stegastes_partitus
ENSPTRG00000003485	CSTF3	99	99.302	ENSSSCG00000040954	CSTF3	100	99.302	Sus_scrofa
ENSPTRG00000003485	CSTF3	99	97.740	ENSTGUG00000005010	CSTF3	100	97.740	Taeniopygia_guttata
ENSPTRG00000003485	CSTF3	100	89.833	ENSTRUG00000004959	cstf3	100	89.833	Takifugu_rubripes
ENSPTRG00000003485	CSTF3	99	90.704	ENSTNIG00000013811	cstf3	99	90.704	Tetraodon_nigroviridis
ENSPTRG00000003485	CSTF3	90	96.417	ENSTBEG00000001544	CSTF3	90	96.417	Tupaia_belangeri
ENSPTRG00000003485	CSTF3	100	96.932	ENSTTRG00000016366	CSTF3	100	96.932	Tursiops_truncatus
ENSPTRG00000003485	CSTF3	99	99.718	ENSUMAG00000018971	CSTF3	100	99.680	Ursus_maritimus
ENSPTRG00000003485	CSTF3	100	99.861	ENSVPAG00000007800	CSTF3	100	99.861	Vicugna_pacos
ENSPTRG00000003485	CSTF3	99	100.000	ENSVVUG00000014938	CSTF3	100	100.000	Vulpes_vulpes
ENSPTRG00000003485	CSTF3	88	79.375	ENSXETG00000021399	cstf3	100	80.583	Xenopus_tropicalis
ENSPTRG00000003485	CSTF3	66	43.595	ENSXETG00000017946	-	99	43.595	Xenopus_tropicalis
ENSPTRG00000003485	CSTF3	89	88.640	ENSXCOG00000011741	cstf3	100	90.400	Xiphophorus_couchianus
ENSPTRG00000003485	CSTF3	100	90.808	ENSXMAG00000009545	cstf3	100	90.808	Xiphophorus_maculatus